Contig 013800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K04Sequence513000032 (14)ref|XP_009772632.1|3e-68PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri775013800 (3)ref|XP_009627036.1|4e-66PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi
JMFF041L10Sequence658000032 (14)ref|XP_009772632.1|7e-105PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri594013800 (3)ref|XP_009627036.1|2e-64PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana tomentosi
JMFF042I09Sequence659000032 (14)ref|XP_009772632.1|6e-104PREDICTED: phosphomethylpyrimidine synthase, chloroplastic [Nicotiana sylvestri607013800 (3)gb|ABQ66371.1|3e-24THIC, partial [Nicotiana benthamiana]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF012K04+ TAAGCAAGGCAA
                      ____________________________________________________________
consensus TAAGCAAGGCAA
 
. : . : . : . : . : . :
rJMFF041L10+ TTTGAGTTCCGATGGATAGACCAGTTTGCTTTGTCACTCGACCCCATGACTGCCATGT
rJMFF012K04+ GATTTGAGTTCCGATGGATAGACCAGTTTGCTTTGTCACTCGACCCCATGACTGCCATGT
                      ____________________________________________________________
consensus GATTTGAGTTCCGATGGATAGACCAGTTTGCTTTGTCACTCGACCCCATGACTGCCATGT
 
. : . : . : . : . : . :
rJMFF041L10+ CCTTCCATGATGAAACTCTACCGTCTGATGGTGCTAAAGTGGCCCATTTCTGCTCCATGT
rJMFF012K04+ CCTTCCATGATGAAACTCTACCGTCTGATGGTGCTAAAGTGGCCCATTTCTGCTCCATGT
                      ____________________________________________________________
consensus CCTTCCATGATGAAACTCTACCGTCTGATGGTGCTAAAGTGGCCCATTTCTGCTCCATGT
 
. : . : . : . : . : . :
rJMFF041L10+ GTGGGCCTAAATTCTGTTCGATGAAGATTACTGAAGATATACGGAAGTATGCTGAGGATC
rJMFF012K04+ GTGGGCCTAAATTCTGTTCGATGAAGATTACTGAAGATATACGGAAGTATGCTGAGGATC
rJMFF042I09+ GAGGATC
                      ____________________________________________________________
consensus GTGGGCCTAAATTCTGTTCGATGAAGATTACTGAAGATATACGGAAGTATGCTGAGGATC
 
. : . : . : . : . : . :
rJMFF041L10+ ACGGGTATGGAAGTGCAGAGGAAGCCATCCGACGTGGGATGGATGCTATGAGTGCTGAGT
rJMFF012K04+ ACGGGTATGGAAGTGCAGAGGAAGCCATCCGACGTGGGATGGATGCTATGAGTGCTGAGT
rJMFF042I09+ ACGGGTATGGAAGTGCAGAGGAAGCCATCCGACGTGGGATGGATGCTATGAGTGCTGAGT
                      ____________________________________________________________
consensus ACGGGTATGGAAGTGCAGAGGAAGCCATCCGACGTGGGATGGATGCTATGAGTGCTGAGT
 
. : . : . : . : . : . :
rJMFF041L10+ TCCAAGCTGCAAAGAAAACTGTGAGTGGTGAACAACACGGTGAGGTTGGAGGGGAAATCT
rJMFF012K04+ TCCAAGCTGCAAAGAAAACTGTGAGTGGTGAACAACACGGTGAGGTTGGAGGGGAAATCT
rJMFF042I09+ TCCAAGCTGCAAAGAAAACTGTGAGTGGTGAACAACACGGTGAGGTTGGAGGGGAAATCT
                      ____________________________________________________________
consensus TCCAAGCTGCAAAGAAAACTGTGAGTGGTGAACAACACGGTGAGGTTGGAGGGGAAATCT
 
. : . : . : . : . : . :
rJMFF041L10+ ATCTGCCAACAAATTACGTAAACTCTTTGAAGATCTAAAGGATGATAAGGACACATGAAG
rJMFF012K04+ ATCTGCCAACAAATTACGTAAACTCTTTGAAGATCTAAAGGATGATAAGGACACATGAAG
rJMFF042I09+ ATCTGCCAACAAATTACGTAAACTCTTTGAAGATCTAAAGGATGATAAGGACACATGAAG
                      ____________________________________________________________
consensus ATCTGCCAACAAATTACGTAAACTCTTTGAAGATCTAAAGGATGATAAGGACACATGAAG
 
. : . : . : . : . : . :
rJMFF041L10+ AACTAACTGGTTTGGAACTTGTATGAGACATCCAGGCAATTCAGGCCAGTCTAGCAAGAA
rJMFF012K04+ AACTAACTGGTTTGGAACTTGTATGAGACATCCAGGCAATTCAGGCCAGTCTAGCAAGAA
rJMFF042I09+ AACTAACTGGTTTGGAACTTGTATGAGACATCCAGGCAATTCAGGCCAGTCTAGCAAGAA
                      ____________________________________________________________
consensus AACTAACTGGTTTGGAACTTGTATGAGACATCCAGGCAATTCAGGCCAGTCTAGCAAGAA
 
. : . : . : . : . : . :
rJMFF041L10+ TCTCAAGATCTTCATCCCCCCATCATGATAGG
rJMFF012K04+ TCTCAAGATCTTCATCCCCCCATCATGATAGGGGTGTCTGTATCTGCTCCAGCCCTGGCT
rJMFF042I09+ TCTCAAGATCTTCATCCCCCCATCATGATAGGGGTGTCTGTATCTGCTCCAGCCCTGGCT
                      ____________________________________________________________
consensus TCTCAAGATCTTCATCCCCCCATCATGATAGGGGTGTCTGTATCTGCTCCAGCCCTGGCT
 
. : . : . : . : . : . :
rJMFF012K04+ CCCTCGGCCAGGATGCTGGCTGAAACAGGCTGAGAAAGTCCCTTCGAACCTGAACAGGAT
rJMFF042I09+ CCCTCGGCCAGGATGCTGGCTGAAACAGGCTGAGAAAGTCCCTTCGAACCTGAACAGGAT
                      ____________________________________________________________
consensus CCCTCGGCCAGGATGCTGGCTGAAACAGGCTGAGAAAGTCCCTTCGAACCTGAACAGGAT
 
. : . : . : . : . : . :
rJMFF012K04+ AATGCCTGCGTAGGGAGCGTGCATTTCCTTTTCTCTTGTTTTCTATGTTTGCACAGGGAT
rJMFF042I09+ AATGCCTGCGTAGGGAGCGTGCATTTCCTTTTCTCTTGTTTTCTATGTTTGCACAGGGAT
                      ____________________________________________________________
consensus AATGCCTGCGTAGGGAGCGTGCATTTCCTTTTCTCTTGTTTTCTATGTTTGCACAGGGAT
 
. : . : . : . : . : . :
rJMFF012K04+ GGTGGAGAATTACCACAAGCCCTGGCTGGCTGGCTGGCTTGTGTTTGGCTGCACCCCTGT
rJMFF042I09+ GGTGGAGAATTACCACAAGCCCTGGCTGGCTGGCTGGCTTGTGTTTGGCTGCACCCCTGT
                      ____________________________________________________________
consensus GGTGGAGAATTACCACAAGCCCTGGCTGGCTGGCTGGCTTGTGTTTGGCTGCACCCCTGT
 
. : . : . : . : . : . :
rJMFF012K04+ CTGTCTATTGTCTTCTCTCTCTACTTTACTGTATATTGTCATATCTGTTCATCGAGGTCG
rJMFF042I09+ CTGTCTATTGTCTTCTCTCTCTACTTTACTGTATATTGTCATATCTGTTCATCGAGGTCG
                      ____________________________________________________________
consensus CTGTCTATTGTCTTCTCTCTCTACTTTACTGTATATTGTCATATCTGTTCATCGAGGTCG
 
. : . : . : . : . : . :
rJMFF012K04+ GGAGCAGTTAGCACCGCCATTTTCTTATCTGCCCAGTAGTAAT
rJMFF042I09+ GGAGCAGTTAGCACCGCCATTTTCTTATCTGCCCAGTAGTAATAACTTACATTGTTTACC
                      ____________________________________________________________
consensus GGAGCAGTTAGCACCGCCATTTTCTTATCTGCCCAGTAGTAATAACTTACATTGTTTACC