Contig 013757:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A05Sequence571013757 (4)emb|CDO98845.1|5e-60unnamed protein product [Coffea canephora]612013757 (4)emb|CDO98845.1|1e-59unnamed protein product [Coffea canephora]
JMFF034J01Sequence572013757 (4)emb|CDO98845.1|1e-60unnamed protein product [Coffea canephora]600013757 (4)emb|CDO98845.1|1e-60unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF001A05- GCCACTAACACCACACCACACACAATCATTCACCCCCTC
rJMFF001A05+ CCACACACAATCATTCACCCCCTC
                      ____________________________________________________________
consensus GCCACTAACACCACACCACACACAATCATTCACCCCCTC
 
. : . : . : . : . : . :
JMFF001A05- CCCCAACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
JMFF034J01- CCCCGACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
rJMFF001A05+ CCCCAACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
rJMFF034J01+ CCCCGACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
                      ____________________________________________________________
consensus CCCCGACTCCATCACCTCCGCCCTCCCTCTGTTCTCACAAATCCCAATCTCCGACAAAAA
 
. : . : . : . : . : . :
JMFF001A05- CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
JMFF034J01- CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
rJMFF001A05+ CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
rJMFF034J01+ CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
                      ____________________________________________________________
consensus CAAATATGAGCGAAGATTCCAAGAGAAATGATGGCGGAGCTCTCGTGGCCAAGCTGCCCG
 
. : . : . : . : . : . :
JMFF001A05- CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
JMFF034J01- CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
rJMFF001A05+ CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
rJMFF034J01+ CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
                      ____________________________________________________________
consensus CCGCCGACGATCGGAAATCCGCATCCCCGCCGGCGTCTTCTATTACCGTGTCCAAGAAGG
 
. : . : . : . : . : . :
JMFF001A05- TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
JMFF034J01- TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
rJMFF001A05+ TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
rJMFF034J01+ TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
                      ____________________________________________________________
consensus TCATCATCAAAAGTGCCGATATGAAGGACGATATGCAGAAAGAGGCCGTCGATATCGCTA
 
. : . : . : . : . : . :
JMFF001A05- TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
JMFF034J01- TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
rJMFF001A05+ TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
rJMFF034J01+ TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
                      ____________________________________________________________
consensus TTTCGGCATTCGAGAAGAACAACGTGGAGAAGGATGTAGCTGAGCATATAAAGAAGGAGT
 
. : . : . : . : . : . :
JMFF001A05- TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
JMFF034J01- TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
rJMFF001A05+ TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
rJMFF034J01+ TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
                      ____________________________________________________________
consensus TCGATAAGAAGCATGGCCCGACTTGGCATTGCATTGTTGGCAAAAATTTTGGTTCCTATG
 
. : . : . : . : . : . :
JMFF001A05- TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
JMFF034J01- TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
rJMFF001A05+ TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
rJMFF034J01+ TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
                      ____________________________________________________________
consensus TGACTCACGAAACAAACCACTTTGTCTATTTCTACTTGGATTCAAAAGCTGTGCTTCTCT
 
. : . : . : . : . : . :
JMFF001A05- TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
JMFF034J01- TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
rJMFF001A05+ TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
rJMFF034J01+ TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
                      ____________________________________________________________
consensus TCAAATCAGGTTAAGCTTGGTGGTGACAGTGATAATGATGCTAGAGCTTGCTTGCCCTCT
 
. : . : . : . : . : . :
JMFF001A05- TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCG
JMFF034J01- TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
rJMFF001A05+ TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
rJMFF034J01+ TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
                      ____________________________________________________________
consensus TTCTCTTGGTATGTATTTTATTTTAAAACTTGTGTGCAAATCATGTAGCTCGAAATTCGG
 
. : . : . : . : . : . :
JMFF034J01- TGTATATTTGTTTCGACT
rJMFF001A05+ TGTATATTTGTTTCGACT
rJMFF034J01+ TGTATATTTGTTTCGACTTGTAAACACATGAATGGAGTTGATCAGAGTGTTCCCTCCCAG
                      ____________________________________________________________
consensus TGTATATTTGTTTCGACTTGTAAACACATGAATGGAGTTGATCAGAGTGTTCCCTCCCAG