Contig 013725:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P22Sequence557008761 (2)dbj|BAJ97770.1|4e-49predicted protein [Hordeum vulgare subsp. vulgare]706013725 (2)ref|XP_010313060.1|6e-15PREDICTED: protein NRT1/ PTR FAMILY 4.4-like isoform X2 [Solanum lycopersicum]
JMFF025M11Sequence558008761 (2)dbj|BAJ97770.1|4e-49predicted protein [Hordeum vulgare subsp. vulgare]697013725 (2)ref|XP_009602084.1|1e-12PREDICTED: protein NRT1/ PTR FAMILY 4.3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF013P22+                                                                    TG
                      ____________________________________________________________
consensus                                                                       TG
 
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rJMFF013P22+          GTCAACAAGATTACCTCAACTCTTAAAAAGGGAGGGTGGCTTAGTGACAATGATCTCAAC
rJMFF025M11+                                 TAAAAAGGGAGGGTGGCTTAGTGACAATGATCTCAAC
                      ____________________________________________________________
consensus             GTCAACAAGATTACCTCAACTCTTAAAAAGGGAGGGTGGCTTAGTGACAATGATCTCAAC
 
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rJMFF013P22+          CGAGACAGGCTAGACCTGTTCTATTGGCTGTTAGCTGCTCTTAGCCTCATCAACTTCTTT
rJMFF025M11+          CGAGACAGGCTAGACCTGTTCTATTGGCTGTTAGCTGCTCTTAGCCTCATCAACTTCTTT
                      ____________________________________________________________
consensus             CGAGACAGGCTAGACCTGTTCTATTGGCTGTTAGCTGCTCTTAGCCTCATCAACTTCTTT
 
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rJMFF013P22+          AACTATCTTTTCTGCTCCAGATGGTATTCTTACAACCCCTCGGTATCCCCAGCCGCCGCC
rJMFF025M11+          AACTATCTTTTCTGCTCCAGATGGTATTCTTACAACCCCTCGGTATCCCCAGCCGCCGCC
                      ____________________________________________________________
consensus             AACTATCTTTTCTGCTCCAGATGGTATTCTTACAACCCCTCGGTATCCCCAGCCGCCGCC
 
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rJMFF013P22+          CTAAACCAACCTCAGCCTCGGGACTTAGAGACTGCAAATTCTAACTCTTTGTAATGGATA
rJMFF025M11+          CTAAACCAACCTCAGCCTCGGGACTTAGAGACTGCAAATTCTAACTCTTTGTAATGGATA
                      ____________________________________________________________
consensus             CTAAACCAACCTCAGCCTCGGGACTTAGAGACTGCAAATTCTAACTCTTTGTAATGGATA
 
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rJMFF013P22+          TGCAGATGGAAAGCTAACTGAACACATTAGGATCTGATTTCTAGCTAGCATTATCTGTCA
rJMFF025M11+          TGCAGATGGAAAGCTAACTGAACACATTAGGATCTGATTTCTAGCTAGCATTATCTGTCA
                      ____________________________________________________________
consensus             TGCAGATGGAAAGCTAACTGAACACATTAGGATCTGATTTCTAGCTAGCATTATCTGTCA
 
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rJMFF013P22+          AAAAAGTTTGTAAGATGATTACTACTACTACTACTGCTATGTAGACTTGATCAGGGTGGT
rJMFF025M11+          AAAAAGTTTGTAAGATGATTACTACTACTACTACTGCTATGTAGACTTGATCAGGGTGGT
                      ____________________________________________________________
consensus             AAAAAGTTTGTAAGATGATTACTACTACTACTACTGCTATGTAGACTTGATCAGGGTGGT
 
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rJMFF013P22+          GTGTTATAGTGCAGCATTAATAATTGACAGTGTGTGTGTGTGTGTGTGACATGGACACAC
rJMFF025M11+          GTGTTATAGTGCAGCATTAATAATTGACAGTGTGTGTGTGTGTGTGTGACATGGACACAC
                      ____________________________________________________________
consensus             GTGTTATAGTGCAGCATTAATAATTGACAGTGTGTGTGTGTGTGTGTGACATGGACACAC
 
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rJMFF013P22+          AAGACTCCCTTGATGGGCAAGGGTGAAAAGAAAGTTAGGTCTAAGAGTCTAAGACTATCA
rJMFF025M11+          AAGACTCCCTTGATGGGCAAGGGTGAAAAGAAAGTTAGGTCTAAGAGTCTAAGACTATCA
                      ____________________________________________________________
consensus             AAGACTCCCTTGATGGGCAAGGGTGAAAAGAAAGTTAGGTCTAAGAGTCTAAGACTATCA
 
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rJMFF013P22+          ACAACAAGATTCATGGTATTGTCGGGCCCGGATGTGGAGCTCTTGGGGTCAGGGATTTTG
rJMFF025M11+          ACAACAAGATTCATGGTATTGTCGGGCCCGGATGTGGAGCTCTTGGGGTCAGGGATTTTG
                      ____________________________________________________________
consensus             ACAACAAGATTCATGGTATTGTCGGGCCCGGATGTGGAGCTCTTGGGGTCAGGGATTTTG
 
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rJMFF013P22+          CCTTTTGTGTGGCAAGATTCATGGTATTCTAGCTTCATCCTTGATTCATTTCTCCACAAA
rJMFF025M11+          CCTTTTGTGTGGCAAGATTCATGGTATTCTAGCTTCATCCTTGATTCATTTCTCCACAAA
                      ____________________________________________________________
consensus             CCTTTTGTGTGGCAAGATTCATGGTATTCTAGCTTCATCCTTGATTCATTTCTCCACAAA
 
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rJMFF013P22+          CATAGTGTAAAAAACACAAAAAGAGGGTCATGGGGTTTGGTCTCTCTCCCCTTTCTAGTA
rJMFF025M11+          CATAGTGTAAAAAACACAAAAAGAGGGTCATGGGGTTTGGTCTCTCTCCCCTTTCTAGTA
                      ____________________________________________________________
consensus             CATAGTGTAAAAAACACAAAAAGAGGGTCATGGGGTTTGGTCTCTCTCCCCTTTCTAGTA
 
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rJMFF013P22+          GAAAGAATTGCAGAGAAATATTGAGTGGTGGGGTTGAGCTTTAT                
rJMFF025M11+          GAAAGAATTGCAGAGAAATATTGAGTGGTGGGGTTGAGCTTTATGCTTTAATTAAAGGGA
                      ____________________________________________________________
consensus             GAAAGAATTGCAGAGAAATATTGAGTGGTGGGGTTGAGCTTTATGCTTTAATTAAAGGGA