Contig 013717:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024E04Sequence231005972 (3)746013717 (2)emb|CDP20376.1|3e-99unnamed protein product [Coffea canephora]
JMFF039P21Sequence585022763ref|XP_004240097.1|1e-74PREDICTED: probable polygalacturonase [Solanum lycopersicum]738013717 (2)ref|XP_009762711.1|2e-102PREDICTED: probable polygalacturonase isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF039P21+ GAATTGAGGACAANCTACATAGTGTCGGGAGATGATTGTGTGGCAATTAAAAG
rJMFF024E04+ GGAGATGATTGTGTGGCAATTAAAAG
                      ____________________________________________________________
consensus GAATTGAGGACAANCTACATAGTGTCGGGAGATGATTGTGTGGCAATTAAAAG
 
. : . : . : . : . : . :
rJMFF039P21+ CGGTATTGATGAATACGGTATAAAGTACGGTATGCCCACCAAACAGTTGATCATCAGACG
rJMFF024E04+ CGGTATTGATGAATACGGTATAAAGTACGGTATGCCCACCAAACAGTTGATCATCAGACG
                      ____________________________________________________________
consensus CGGTATTGATGAATACGGTATAAAGTACGGTATGCCCACCAAACAGTTGATCATCAGACG
 
. : . : . : . : . : . :
rJMFF039P21+ CCTCACCTGCATCTCTCCCACCAGCGGCGCAATAGCAATGGGAAGTGAAATGTCCGGTGG
rJMFF024E04+ CCTCACCTGCATCTCTCCCACCAGCGGCGCAATAGCAATGGGAAGTGAAATGTCCGGTGG
                      ____________________________________________________________
consensus CCTCACCTGCATCTCTCCCACCAGCGGCGCAATAGCAATGGGAAGTGAAATGTCCGGTGG
 
. : . : . : . : . : . :
rJMFF039P21+ GATTGAAGACGTCAGGGCCTCCGACATCACCGCCCTCGACACGGAGTCAGGGGTGAGGAT
rJMFF024E04+ GATTGAAGACGTCAGGGCCTCCGACATCACCGCCCTCGACACGGAGTCAGGGGTGAGGAT
                      ____________________________________________________________
consensus GATTGAAGACGTCAGGGCCTCCGACATCACCGCCCTCGACACGGAGTCAGGGGTGAGGAT
 
. : . : . : . : . : . :
rJMFF039P21+ CAAGACCGCCCTCGGCCGCGGCGGCTACGTCAAGAATATATACGTCAAGGGATTGAGAGC
rJMFF024E04+ CAAGACCGCCCTCGGCCGCGGCGGCTACGTCAAGAATATATACGTCAAGGGATTGAGAGC
                      ____________________________________________________________
consensus CAAGACCGCCCTCGGCCGCGGCGGCTACGTCAAGAATATATACGTCAAGGGATTGAGAGC
 
. : . : . : . : . : . :
rJMFF039P21+ GCACACCATGAAATTGTTGTTTCAGATGACTGGGAAGTACGGCTCCCACGCCGACAAAAA
rJMFF024E04+ GCACACCATGAAATTGTTGTTTCAGATGACTGGGAAGTACGGCTCCCACGCCGACAAAAA
                      ____________________________________________________________
consensus GCACACCATGAAATTGTTGTTTCAGATGACTGGGAAGTACGGCTCCCACGCCGACAAAAA
 
. : . : . : . : . : . :
rJMFF039P21+ TTTCGACCCGAAAGCGATTCCGGTGGTGGCGGGGATCAACTTCCGGGATGTGGTGGCGGA
rJMFF024E04+ TTTCGACCCGAAAGCGATTCCGGTGGTGGCGGGGATCAACTTCCGGGATGTGGTGGCGGA
                      ____________________________________________________________
consensus TTTCGACCCGAAAGCGATTCCGGTGGTGGCGGGGATCAACTTCCGGGATGTGGTGGCGGA
 
. : . : . : . : . : . :
rJMFF039P21+ TAATGTGACGACGGCGGGCACGATGGAGGGAATCCCCGGCCACCCCTTCACCGGAATCTG
rJMFF024E04+ TAATGTGACGACGGCGGGCACGATGGAGGGAATCCCCGGCCACCCCTTCACCGGAATCTG
                      ____________________________________________________________
consensus TAATGTGACGACGGCGGGCACGATGGAGGGAATCCCCGGCCACCCCTTCACCGGAATCTG
 
. : . : . : . : . : . :
rJMFF039P21+ CATGGCTAACGTCACCATAGGGATGGCAAAGAACGGCAAGAAGCAGCCGCCGTGGGTTTG
rJMFF024E04+ CATGGCTAACGTCACCATAGGGATGGCAAAGAACGGCAAGAAGCAGCCGCCGTGGGTTTG
                      ____________________________________________________________
consensus CATGGCTAACGTCACCATAGGGATGGCAAAGAACGGCAAGAAGCAGCCGCCGTGGGTTTG
 
. : . : . : . : . : . :
rJMFF039P21+ TGCTAATATTCAAGGAGTGGCCAGTGGGGTGGTTCCCCCGCCATGCAATTTGTTGCATAG
rJMFF024E04+ TGCTAATATTCAAGGAGTGGCCAGTGGGGTGGTTCCCCCGCCATGCAATTTGTTGCATAG
                      ____________________________________________________________
consensus TGCTAATATTCAAGGAGTGGCCAGTGGGGTGGTTCCCCCGCCATGCAATTTGTTGCATAG
 
. : . : . : . : . : . :
rJMFF039P21+ TCAGGGCCCAGTGAAGCCTGGAATGTGCGATTTGCCTGCCAAAAATGGATGAGAATTCAT
rJMFF024E04+ TCAGGGCCCAGTGAAGCCTGGAATGTGCGATTTGCCTGCCAAAAATGGATGAGAATTCAT
                      ____________________________________________________________
consensus TCAGGGCCCAGTGAAGCCTGGAATGTGCGATTTGCCTGCCAAAAATGGATGAGAATTCAT
 
. : . : . : . : . : . :
rJMFF039P21+ ATGCTTTGCGGGGCTATTAATATAATATAATAATATTATGTCTTTTCATTAGTTATTCCA
rJMFF024E04+ ATGCTTTGCGGGGCTATTAATATAATATAATAATATTATGTCTTTTCATTAGTTATTCCA
                      ____________________________________________________________
consensus ATGCTTTGCGGGGCTATTAATATAATATAATAATATTATGTCTTTTCATTAGTTATTCCA
 
. : . : . : . : . : . :
rJMFF039P21+ TTGAGTCTTAATAAAA
rJMFF024E04+ TTGAGTCTTAATAAAATGAACAAGTCATTTATTTCGCTGATTATTTCTGATAAGAATAAC
                      ____________________________________________________________
consensus TTGAGTCTTAATAAAATGAACAAGTCATTTATTTCGCTGATTATTTCTGATAAGAATAAC