Contig 013705:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021L20Sequence565012896 (3)ref|XP_009613402.1|88.6PREDICTED: probable WRKY transcription factor 3 [Nicotiana tomentosiformis]746013705 (3)ref|XP_011098678.1|171PREDICTED: probable WRKY transcription factor 4 [Sesamum indicum]
JMFF027G22Sequence534012896 (3)gb|AHL20268.1|2e-08WRKY transcription factor, partial [Olea europaea]723013705 (3)ref|XP_011098678.1|180PREDICTED: probable WRKY transcription factor 4 [Sesamum indicum]
JMSF031E16Sequence677012896 (3)ref|XP_009613402.1|89.0PREDICTED: probable WRKY transcription factor 3 [Nicotiana tomentosiformis]741013705 (3)gb|AFJ54352.1|4e-52WRKY transcription factor [Camellia sinensis]

Alignment

This contig is upended


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rJMSF031E16+                                                    AGTCTGCCCAGTTTTCCA
                      ____________________________________________________________
consensus                                                       AGTCTGCCCAGTTTTCCA
 
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rJMSF031E16+          CCAAATTGCCATCTGAACAAGTCGATGTGGGGTGTGACCTTGATGATATGGAGGAGACTG
                      ____________________________________________________________
consensus             CCAAATTGCCATCTGAACAAGTCGATGTGGGGTGTGACCTTGATGATATGGAGGAGACTG
 
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rJMSF031E16+          CAATGGCATTAGATGAGGATGATGTACAGAATCCTAAGAAAAGGAGCTCAGAGGTTGTGT
                      ____________________________________________________________
consensus             CAATGGCATTAGATGAGGATGATGTACAGAATCCTAAGAAAAGGAGCTCAGAGGTTGTGT
 
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rJMSF031E16+          CATCTGCTATGCCTTCATCTCTTAAAACGGTCACTGAATCCAGAATCATAGTGCAGACAA
rJMFF027G22+                                                     AATCATAGTGCAGACAA
rJMFF021L20+                                                     AATCATAGTGCAGACAA
                      ____________________________________________________________
consensus             CATCTGCTATGCCTTCATCTCTTAAAACGGTCACTGAATCCAGAATCATAGTGCAGACAA
 
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rJMSF031E16+          GAAGTGATGTTGACCTTTTGGATGATGGGTACAAGTGGCGAAAATATGGGCAGAAAGTAG
rJMFF027G22+          GAAGTGATGTTGACCTTTTGGATGATGGGTACAAGTGGCGAAAATATGGGCAGAAAGTAG
rJMFF021L20+          GAAGTGATGTTGACCTTTTGGATGATGGGTACAAGTGGCGAAAATATGGGCAGAAAGTAG
                      ____________________________________________________________
consensus             GAAGTGATGTTGACCTTTTGGATGATGGGTACAAGTGGCGAAAATATGGGCAGAAAGTAG
 
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rJMSF031E16+          TAAAGGGGAATGCTAATCCAAGGAGTTATTATAGATGTACATACAGTGGATGCAGTGTTC
rJMFF027G22+          TAAAGGGGAATGCTAATCCAAGGAGTTATTATAGATGTACATACAGTGGATGCAGTGTTC
rJMFF021L20+          TAAAGGGGAATGCTAATCCAAGGAGTTATTATAGATGTACATACAGTGGATGCAGTGTTC
                      ____________________________________________________________
consensus             TAAAGGGGAATGCTAATCCAAGGAGTTATTATAGATGTACATACAGTGGATGCAGTGTTC
 
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rJMSF031E16+          GCAAACACGTTGAAAGGGCTTCAACAGATCCCAAAGCAGTTATAACTACGTATGAAGGCA
rJMFF027G22+          GCAAACACGTTGAAAGGGCTTCAACAGATCCCAAAGCAGTTATAACTACGTATGAAGGCA
rJMFF021L20+          GCAAACACGTTGAAAGGGCTTCAACAGATCCCAAAGCAGTTATAACTACGTATGAAGGCA
                      ____________________________________________________________
consensus             GCAAACACGTTGAAAGGGCTTCAACAGATCCCAAAGCAGTTATAACTACGTATGAAGGCA
 
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rJMSF031E16+          AACACAATCACGATATCCCTAATGGGCGGAACAGCAACCGCAGCCAAACTAACGCTAACG
rJMFF027G22+          AACACAATCACGATATCCCTAATGGGCGGAACAGCAACCGCAGCCAAACTAACGCTAACG
rJMFF021L20+          AACACAATCACGATATCCCTAATGGGCGGAACAGCAACCGCAGCCAAACTAACGCTAACG
                      ____________________________________________________________
consensus             AACACAATCACGATATCCCTAATGGGCGGAACAGCAACCGCAGCCAAACTAACGCTAACG
 
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rJMSF031E16+          TTCTACAACTGAAGCAGGAAAGCACGCTCGCAGTTAACAGCTGAAAGTTGATGGCGATAA
rJMFF027G22+          TTCTACAACTGAAGCAGGAAAGCACGCTCGCAGTTAACAGCTGAAAGTTGATGGCGATAA
rJMFF021L20+          TTCTACAACTGAAGCAGGAAAGCACGCTCGCAGTTAACAGCTGAAAGTTGATGGCGATAA
                      ____________________________________________________________
consensus             TTCTACAACTGAAGCAGGAAAGCACGCTCGCAGTTAACAGCTGAAAGTTGATGGCGATAA
 
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rJMSF031E16+          CCCAATTCTTCGTTTTCTTGCAAAACCTGTTTGCAGATGTCCATTGGCTCCTTTACACAC
rJMFF027G22+          CCCAATTCTTCGTTTTCTTGCAAAACCTGTTTGCAGATGTCCATTGGCTCCTTTACACAC
rJMFF021L20+          CCCAATTCTTCGTTTTCTTGCAAAACCTGTTTGCAGATGTCCATTGGCTCCTTTACACAC
                      ____________________________________________________________
consensus             CCCAATTCTTCGTTTTCTTGCAAAACCTGTTTGCAGATGTCCATTGGCTCCTTTACACAC
 
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rJMSF031E16+          AGTTTGTGTTACCTGTAAGCTTTCGCCTTCCTCTTTTGCTTGATGCTTCCCATGGTTAGT
rJMFF027G22+          AGTTTGTGTTACCTGTAAGCTTTCGCCTTCCTCTTTTGCTTGATGCTTCCCATGGTTAGT
rJMFF021L20+          AGTTTGTGTTACCTGTAAGCTTTCGCCTTCCTCTTTTGCTTGATGCTTCCCATGGTTAGT
                      ____________________________________________________________
consensus             AGTTTGTGTTACCTGTAAGCTTTCGCCTTCCTCTTTTGCTTGATGCTTCCCATGGTTAGT
 
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rJMSF031E16+          TTGCATCAGGTTGTAAGCTTGATAAATAAGTAGTAGTGCACAGTGAAGATCTGTGAGCTC
rJMFF027G22+          TTGCATCAGGTTGTAAGCTTGATAAATAAGTAGTAGTGCACAGTGAAGATCTGTGAGCTC
rJMFF021L20+          TTGCATCAGGTTGTAAGCTTGATAAATAAGTAGTAGTGCACAGTGAAGATCTGTGAGCTC
                      ____________________________________________________________
consensus             TTGCATCAGGTTGTAAGCTTGATAAATAAGTAGTAGTGCACAGTGAAGATCTGTGAGCTC
 
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rJMSF031E16+          TCAATCTTGTGTATTTTGTTTCATATGTGGTGGATCCAAGTGAATGTTTACTTGCAAAGT
rJMFF027G22+          TCAATCTTGTGTATTTTGTTTCATATGTGGTGGATCCAAGTGAATGTTTACTTGCAAAGT
rJMFF021L20+          TCAATCTTGTGTATTTTGTTTCATATGTGGTGGATCCAAGTGAATGTTTACTTGCAAAGT
                      ____________________________________________________________
consensus             TCAATCTTGTGTATTTTGTTTCATATGTGGTGGATCCAAGTGAATGTTTACTTGCAAAGT
 
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rJMFF027G22+          TGCAAGCTTTAATGTTGAATGTCTGTCTGGCTAAAATTTCATTGGAACTAGGATGCCTGT
rJMFF021L20+          TGCAAGCTTTAATGTTGAATGTCTGTCTGGCTAAAATTTCATTGGAACTAGGATGCCTGT
                      ____________________________________________________________
consensus             TGCAAGCTTTAATGTTGAATGTCTGTCTGGCTAAAATTTCATTGGAACTAGGATGCCTGT
 
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rJMFF027G22+          TTTCTTCTCCCTGGACATGTCTAACTAAAATTCTTGTGCCCTTT                
rJMFF021L20+          TTTCTTCTCCCTGGACATGTCTAACTAAAATTCTTGTGCCCTTTTGAGGGAAGAATATGT
                      ____________________________________________________________
consensus             TTTCTTCTCCCTGGACATGTCTAACTAAAATTCTTGTGCCCTTTTGAGGGAAGAATATGT
 
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rJMFF021L20+          ATCATTTTAATGATCTGATCAAAGTCTCATGGTCTCTGATCAATACAATCAAGAGCCACA
                      ____________________________________________________________
consensus             ATCATTTTAATGATCTGATCAAAGTCTCATGGTCTCTGATCAATACAATCAAGAGCCACA