Contig 013696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020E06Sequence578000919 (4)emb|CDP02419.1|1e-23unnamed protein product [Coffea canephora]651013696 (4)gb|EYU44316.1|4e-58hypothetical protein MIMGU_mgv1a004819mg [Erythranthe guttata]
JMSF002H24Sequence267013696 (4)gb|KJB48475.1|1e-32hypothetical protein B456_008G070600 [Gossypium raimondii]669023426ref|XP_006344826.1|9e-22PREDICTED: protein LYK5-like [Solanum tuberosum]
JMSF041F18Sequence791000919 (4)emb|CDP02419.1|4e-61unnamed protein product [Coffea canephora]750013696 (4)emb|CDP02419.1|1e-103unnamed protein product [Coffea canephora]
JMSF042D14Sequence744000919 (4)emb|CDP02419.1|7e-49unnamed protein product [Coffea canephora]768013696 (4)emb|CDP02419.1|5e-77unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF041F18+ AATGAAGCCATGGAAGGAGAAAAGAAT-G
rJMSF042D14+ AGCCATGGAAGGAGAAAAGAATNG
                      ____________________________________________________________
consensus AATGAAGCCATGGAAGGAGAAAAGAATNG
 
. : . : . : . : . : . :
rJMSF041F18+ GGCATCATCACATGCCTG-AAACAAGAGGACTTTGCTTGTCTGAAGAACAGACAGTCAGC
rJMSF042D14+ GGCATCATCACATGCCTGAAAACAAGAGGACTTTGCTTGTCTGAAGAACAGACAGTCAGC
                      ____________________________________________________________
consensus GGCATCATCACATGCCTGAAAACAAGAGGACTTTGCTTGTCTGAAGAACAGACAGTCAGC
 
. : . : . : . : . : . :
rJMSF041F18+ ACTATTTTGAGGCGGCCAAGAATT-GGGGGGAATAGAATCACAGATATGTTCACAGAGCC
rJMSF042D14+ ACTATTTTGAGGCGGCCAAGAATTGGGGGGGAATAGAATCACAGATATGTTCACAGAGCC
                      ____________________________________________________________
consensus ACTATTTTGAGGCGGCCAAGAATTGGGGGGGAATAGAATCACAGATATGTTCACAGAGCC
 
. : . : . : . : . : . :
rJMSF041F18+ TTACAGGCTAATTCGTAGGTGCGAAGTGACTGCAATACTCATCTTGTATGGCCTTCCGAG
rJMSF042D14+ TTACAGGCTAATTCGTAGGTGCGAAGTGACTGCAATACTCATCTTGTATGGCCTTCCGAG
                      ____________________________________________________________
consensus TTACAGGCTAATTCGTAGGTGCGAAGTGACTGCAATACTCATCTTGTATGGCCTTCCGAG
 
. : . : . : . : . : . :
JMSF002H24- CATGAGATGATGCATGCATGGTTGCGGCTTCAAGG
rJMSF041F18+ GTTGCTGACCGGCTCAATCCTGGCTCATGAGATGATGCATGCATACCTGCGGCTTAAAGG
rJMSF042D14+ GTTGCTGACCGGCTCAATCCTGGCTCATGAGATGATGCATGCATACCTGCGGCTTAAAGG
rJMFF020E06+ CATGAGATGATGCATGCATACCTGCGGCTTAAAGG
                      ____________________________________________________________
consensus GTTGCTGACCGGCTCAATCCTGGCTCATGAGATGATGCATGCATACCTGCGGCTTAAAGG
 
. : . : . : . : . : . :
JMSF002H24- TTATCCCAATCTTAGCCCAGAAGTCGAAGAAGGTATCTGCCAAGTCCTAGCTCACATGTG
rJMSF041F18+ TTATCCCAATCTAAGCCCAGAAATAGAAGAAGGAATCTGCCAAGTCTTAGCTCACATGTG
rJMSF042D14+ TTATCCCAATCTAAGCCCAGAAATAGAAGAAGGAATCTGCCAAGTCTTAGCTCACATGTG
rJMFF020E06+ TTATCCCAATCTAAGCCCAGAAATAGAAGAAGGAATCTGCCAAGTCTTAGCTCACATGTG
                      ____________________________________________________________
consensus TTATCCCAATCTAAGCCCAGAAATAGAAGAAGGAATCTGCCAAGTCTTAGCTCACATGTG
 
. : . : . : . : . : . :
JMSF002H24- GTTGGATTCTGAAATTTTAGCCGGTTCTGGTAG
rJMSF041F18+ GTTAGATTCAGAAATCATAGCCGGTTCTGGTAGCAGCAGCACTGCATCTACTTCTTCGTC
rJMSF042D14+ GTTAGATTCAGAAATCATAGCCGGTTCTGGTAGCAGCAGCACTGCATCTACTTCTTCGTC
rJMFF020E06+ GTTAGATTCAGAAATCATAGCCGGTTCTGGTAGCAGCAGCACTGCATCTACTTCTTCGTC
                      ____________________________________________________________
consensus GTTAGATTCAGAAATCATAGCCGGTTCTGGTAGCAGCAGCACTGCATCTACTTCTTCGTC
 
. : . : . : . : . : . :
rJMSF041F18+ TTCTTCGTCTGCAACCTCACCATCATCATCGTCATCATCGTCCACTACCTCTTCAAAGAA
rJMSF042D14+ TTCTTCGTCTGCAACCTCACCATCATCATCGTCATCATCGTCCACTACCTCTTCAAAGAA
rJMFF020E06+ TTCTTCGTCTGCAACCTCACCATCATCATCGTCATCATCGTCCACTACCTCTTCAAAGAA
                      ____________________________________________________________
consensus TTCTTCGTCTGCAACCTCACCATCATCATCGTCATCATCGTCCACTACCTCTTCAAAGAA
 
. : . : . : . : . : . :
rJMSF041F18+ GGGTACCCGGTCGCAGTTCGAGAAGAAACTGGGCGAGTTTTTCAAGCACCAGATAGAATC
rJMSF042D14+ GGGTACCCGGTCGCAGTTCGAGAAGAAACTGGGCGAGTTTTTCAAGCACCAGATAGAATC
rJMFF020E06+ GGGTACCCGGTCGCAGTTCGAGAAGAAACTGGGCGAGTTTTTCAAGCACCAGATAGAATC
                      ____________________________________________________________
consensus GGGTACCCGGTCGCAGTTCGAGAAGAAACTGGGCGAGTTTTTCAAGCACCAGATAGAATC
 
. : . : . : . : . : . :
rJMSF041F18+ AGACACTTCTGTAGCTTATGGCGATGGGTTCAGAGAAGGCAACAAGGCAGTGCTCAAGTA
rJMSF042D14+ AGACACTTCTGTAGCTTATGGCGATGGGTTCAGAGAAGGCAACAAGGCAGTGCTCAAGTA
rJMFF020E06+ AGACACTTCTGTAGCTTATGGCGATGGGTTCAGAGAAGGCAACAAGGCAGTGCTCAAGTA
                      ____________________________________________________________
consensus AGACACTTCTGTAGCTTATGGCGATGGGTTCAGAGAAGGCAACAAGGCAGTGCTCAAGTA
 
. : . : . : . : . : . :
rJMSF041F18+ CGGCCTCAGGAGTACACTTGACCATATTCGGCTAACTGGAAGCTTTCCTTGCTGATCTGA
rJMSF042D14+ CGGCCTCAGGAGTACACTTGACCATATTCGGCTAACTGGAAGCTTTCCTTGCTGATCTGA
rJMFF020E06+ CGGCCTCAGGAGTACACTTGACCATATTCGGCTAACTGGAAGCTTTCCTTGCTGATCTGA
                      ____________________________________________________________
consensus CGGCCTCAGGAGTACACTTGACCATATTCGGCTAACTGGAAGCTTTCCTTGCTGATCTGA
 
. : . : . : . : . : . :
rJMSF041F18+ TGAGGTTTTCCACTTCCAGTCATACTTTATATATATACTTTGATACCAGTTTTATAGGAC
rJMSF042D14+ TGAGGTTTTCCACTTCCAGTCATACTTTATATATATACTTTGATACCAGTTTTATAGGAC
rJMFF020E06+ TGAGGTTTTCCACTTCCAGTCATACTTTATATATATACTTTGATACCAGTTTTATAGGAC
                      ____________________________________________________________
consensus TGAGGTTTTCCACTTCCAGTCATACTTTATATATATACTTTGATACCAGTTTTATAGGAC
 
. : . : . : . : . : . :
rJMSF041F18+ AAACCCCCCCATGCATATACAAATCATAAAGATGTAATGAATCC
rJMSF042D14+ AAACCCCCCCATGCATATACAAATCATAAAGATGTAATGAATCCAATAAATACGTGTATG
rJMFF020E06+ AAACCCCCCCATGCATATACAAATCATAAAGATGTAATGAATCCAATAAATACGTGTATG
                      ____________________________________________________________
consensus AAACCCCCCCATGCATATACAAATCATAAAGATGTAATGAATCCAATAAATACGTGTATG
 
. : . : . : . : . : . :
rJMSF042D14+ TATTATAGAGTGCAACATATATAT
rJMFF020E06+ TATTATAGAGTGCAACATATATATTGTGATTATGATATTTATATACATAACAACATCAAT
                      ____________________________________________________________
consensus TATTATAGAGTGCAACATATATATTGTGATTATGATATTTATATACATAACAACATCAAT