Contig 013678:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009B21Sequence478004479 (2)ref|XP_006426527.1|4e-45hypothetical protein CICLE_v10025421mg [Citrus clementina] gb|ESR39767.1| hypoth696013678 (2)gb|AAG51573.1|AC027034_191e-60RNA helicase, 5' partial; 101954-101280 [Arabidopsis thaliana]
JMFF017A17Sequence478004479 (2)ref|XP_006426527.1|4e-46hypothetical protein CICLE_v10025421mg [Citrus clementina] gb|ESR39767.1| hypoth819013678 (2)gb|EPS60527.1|5e-87hypothetical protein M569_14276, partial [Genlisea aurea]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF017A17+                               GCCAGCATGTGGAAATNGTGTCAGAAAGCCAAAAATATA
                      ____________________________________________________________
consensus                                  GCCAGCATGTGGAAATNGTGTCAGAAAGCCAAAAATATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF017A17+          CCAAATTAGTGAAGTTGTTGGAGGACATTATGGATGGTAGCAGAATTCTGATATTTATGG
                      ____________________________________________________________
consensus             CCAAATTAGTGAAGTTGTTGGAGGACATTATGGATGGTAGCAGAATTCTGATATTTATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+                          TGATCAAACAACTCGGCAATTGCGGATGGATGGTTGGCCTGCAC
rJMFF017A17+          ACACTAAAAAAGGCTGTGATCAAACAACTCGGCAATTGCGGATGGATGGTTGGCCTGCAC
                      ____________________________________________________________
consensus             ACACTAAAAAAGGCTGTGATCAAACAACTCGGCAATTGCGGATGGATGGTTGGCCTGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          TTTCAATTCATGGTGATAAGAGCCAAGCAGAAAGAGATTGGGTCCTCTCAGAATTCAAAG
rJMFF017A17+          TTTCAATTCATGGTGATAAGAGCCAAGCAGAAAGAGATTGGGTCCTCTCAGAATTCAAAG
                      ____________________________________________________________
consensus             TTTCAATTCATGGTGATAAGAGCCAAGCAGAAAGAGATTGGGTCCTCTCAGAATTCAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          CTGGCAAGAGTCCCATAATGACAGCTACAGATGTTGCTGCTCGAGGCTTAGATGTGAAGG
rJMFF017A17+          CTGGCAAGAGTCCCATAATGACAGCTACAGATGTTGCTGCTCGAGGCTTAGATGTGAAGG
                      ____________________________________________________________
consensus             CTGGCAAGAGTCCCATAATGACAGCTACAGATGTTGCTGCTCGAGGCTTAGATGTGAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          ATGTTAAATATGTCATCAACTACGACTTCCCAGGATCCCTCGAGGACTATGTTCATCGAA
rJMFF017A17+          ATGTTAAATATGTCATCAACTACGACTTCCCAGGATCCCTCGAGGACTATGTTCATCGAA
                      ____________________________________________________________
consensus             ATGTTAAATATGTCATCAACTACGACTTCCCAGGATCCCTCGAGGACTATGTTCATCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          TTGGTCGGACAGGAAGAGCAGGTGCCAAAGGAACAGCTTACACATTCTTCACAGCTGCAA
rJMFF017A17+          TTGGTCGGACAGGAAGAGCAGGTGCCAAAGGAACAGCTTACACATTCTTCACAGCTGCAA
                      ____________________________________________________________
consensus             TTGGTCGGACAGGAAGAGCAGGTGCCAAAGGAACAGCTTACACATTCTTCACAGCTGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          ATGCGAGATTTGCAAAAGATCTTATTCATATTCTTCAGGAGGCTGGGCAGAAGGTCAGTC
rJMFF017A17+          ATGCGAGATTTGCAAAAGATCTTATTCATATTCTTCAGGAGGCTGGGCAGAAGGTCAGTC
                      ____________________________________________________________
consensus             ATGCGAGATTTGCAAAAGATCTTATTCATATTCTTCAGGAGGCTGGGCAGAAGGTCAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          CTGAACTGGCAACCATGGGACGCGGTGCTCCTCCTCCTCCTCCAGGAGGCTATGGCGGTT
rJMFF017A17+          CTGAACTGGCAACCATGGGACGCGGTGCTCCTCCTCCTCCTCCAGGAGGCTATGGCGGTT
                      ____________________________________________________________
consensus             CTGAACTGGCAACCATGGGACGCGGTGCTCCTCCTCCTCCTCCAGGAGGCTATGGCGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          TCCGAGATCGTGGTCGAGGTTATGGAGGTGGTCGCCGGTGGAATTGAGGTTGAGCTGATG
rJMFF017A17+          TCCGAGATCGTGGTCGAGGTTATGGAGGTGGTCGCCGGTGGAATTGAGGTTGAGCTGATG
                      ____________________________________________________________
consensus             TCCGAGATCGTGGTCGAGGTTATGGAGGTGGTCGCCGGTGGAATTGAGGTTGAGCTGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          GATTTCCATTACAATCACCTGCAAATTGGCACATCACCTGATGGGTATCCACCCCAGCTA
rJMFF017A17+          GATTTCCACTACAATCACCTGCAAATTGGCACATCACCTGATGGGTATCCACCCCAGCTA
                      ____________________________________________________________
consensus             GATTTCCATTACAATCACCTGCAAATTGGCACATCACCTGATGGGTATCCACCCCAGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          TCACTAGGACGAAGACTCAGAGTCTGTTATCTCATTTTTGTTTGGTGCATCTTATCCTGA
rJMFF017A17+          TCACTAGGACGAAGACTCAGAGTCTGTTATCTCATTTTTGTTTGGTGCATCTTATCCTGA
                      ____________________________________________________________
consensus             TCACTAGGACGAAGACTCAGAGTCTGTTATCTCATTTTTGTTTGGTGCATCTTATCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          CTCGTATTATATTTCAGGGGAGTTGATGGATACCTTAGTTATGAAGACTCATTTATCTTT
rJMFF017A17+          CTCGTATTATATTTCAGGGGAGTTGATGGATACCTTAGTTATGAAGACTCATTTATCTTT
                      ____________________________________________________________
consensus             CTCGTATTATATTTCAGGGGAGTTGATGGATACCTTAGTTATGAAGACTCATTTATCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009B21+          CTTGTATCATATTTGACCCTTTGTATTTCGATCAAGTGAAACATTAACGAAT        
rJMFF017A17+          CTTGTATCATATTTGACCCTTTGTATTTCGATCAAGTGAAACATTAACGAATTTTTATTT
                      ____________________________________________________________
consensus             CTTGTATCATATTTGACCCTTTGTATTTCGATCAAGTGAAACATTAACGAATTTTTATTT