Contig 013677:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F04Sequence633013677 (4)ref|XP_006347915.1|158PREDICTED: uncharacterized protein LOC102584275 [Solanum tuberosum]732013677 (4)ref|XP_009776946.1|194PREDICTED: uncharacterized protein LOC104226615 [Nicotiana sylvestris]
JMFF031L11Sequence636013677 (4)ref|XP_006347915.1|139PREDICTED: uncharacterized protein LOC102584275 [Solanum tuberosum]780013677 (4)ref|XP_009776946.1|225PREDICTED: uncharacterized protein LOC104226615 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF016F04- ATCTATTCCTATACCTATAACTATAATTTCC
                      ____________________________________________________________
consensus ATCTATTCCTATACCTATAACTATAATTTCC
 
. : . : . : . : . : . :
JMFF016F04- CCGCACTCCGTCGCTCTACCCAGAGCGATCTCAGACAACAGAAGCCATTAGAAGCGAACG
JMFF031L11- ACCCTGAGCGATCTCAGACAACAGAAGCCATTAGAAGCGAACG
                      ____________________________________________________________
consensus CCGCACTCCGTCGCTCTACCCTGAGCGATCTCAGACAACAGAAGCCATTAGAAGCGAACG
 
. : . : . : . : . : . :
JMFF016F04- CCACTGCTTTTGACGATGGCCATAATCGCCGAATCGTCAGATGAGAATTCAAAAGCGCCG
JMFF031L11- CCACTGCTTTTGACGATGGCCATAATCGCCGAATCGTCAGATGAGAATTCAAAAGCGCCG
                      ____________________________________________________________
consensus CCACTGCTTTTGACGATGGCCATAATCGCCGAATCGTCAGATGAGAATTCAAAAGCGCCG
 
. : . : . : . : . : . :
JMFF016F04- CCGTCCCCCGTCGCCCCGTCACTCCCTCGACAGCGAGGAAACTACTCAGACAATTTGGAA
JMFF031L11- CCGTCCCCCGTCGCCCCGTCACTCCCTCGACAGCGAGGAAACTACTCAGACAATTTGGAA
                      ____________________________________________________________
consensus CCGTCCCCCGTCGCCCCGTCACTCCCTCGACAGCGAGGAAACTACTCAGACAATTTGGAA
 
. : . : . : . : . : . :
JMFF016F04- ACCCTAGCACAGGCTGCACCGTGGATTGACGATGCTCTGCAACAGGCGCGGCAGGCCCAG
JMFF031L11- ACCCTAGCACAGGCTGCACCGTGGATTGACGATGCTCTGCAACAGGCGCGGCAGGCCCAG
                      ____________________________________________________________
consensus ACCCTAGCACAGGCTGCACCGTGGATTGACGATGCTCTGCAACAGGCGCGGCAGGCCCAG
 
. : . : . : . : . : . :
JMFF016F04- CAGACTGTAGAAACTGTAATAGAGAGTGCAATCACCGTAACCAAATCTCGATTGGATCGT
JMFF031L11- CAGACTGTAGAAACTGTAATAGAGAGTGCAATCACCGTAACCAAATCTCGATTGGATCGT
                      ____________________________________________________________
consensus CAGACTGTAGAAACTGTAATAGAGAGTGCAATCACCGTAACCAAATCTCGATTGGATCGT
 
. : . : . : . : . : . :
JMFF016F04- ATCCTGACCACATCGTCTGCTCATTTTAATCAAACTCTTGATTCCTTGCAAGATGTTAAG
JMFF031L11- ATCCTGACCACATCGTCTGCTCATTTTAATCAAACTCTTGATTCCTTGCAAGATGTTAAG
                      ____________________________________________________________
consensus ATCCTGACCACATCGTCTGCTCATTTTAATCAAACTCTTGATTCCTTGCAAGATGTTAAG
 
. : . : . : . : . : . :
JMFF016F04- GCTGAATATCATTTATATGAGGACTTAACTTTTGGGAGGATGGAAGAGGGTATTTGTATT
JMFF031L11- GCTGAATATCATTTATATGAGGACTTAACTTTTGGGAGGATGAAAGAGGGTATTTGTATT
                      ____________________________________________________________
consensus GCTGAATATCATTTATATGAGGACTTAACTTTTGGGAGGATGGAAGAGGGTATTTGTATT
 
. : . : . : . : . : . :
JMFF016F04- GCAGCTTCACATCCTCTGATCACAACAGGAGCTTTTCTTAGCCTTGGATTCTTGGGTCTG
JMFF031L11- GCAGCTTCACATC--CTGATCACAACAGGAGCTTTTCTTAGCCTTGGATTCTTGGGTCTG
                      ____________________________________________________________
consensus GCAGCTTCACATCCTCTGATCACAACAGGAGCTTTTCTTAGCCTTGGATTCTTGGGTCTG
 
. : . : . : . : . : . :
JMFF016F04- AAAAG
JMFF031L11- AAAAGACCAAGGCGATTTTTGTACTACAAAGCAAGAAGCATATTTGTCAGTGAAGAGGCC
rJMFF031L11+ GCC
rJMFF016F04+ GCC
                      ____________________________________________________________
consensus AAAAGACCAAGGCGATTTTTGTACTACAAAGCAAGAAGCATATTTGTCAGTGAAGAGGCC
 
. : . : . : . : . : . :
JMFF031L11- ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
rJMFF031L11+ ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
rJMFF016F04+ ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
                      ____________________________________________________________
consensus ATGCTTTCTAAGGCTGATGCAAAAGTCAAAGAGCTGAAGAAATCCATTGATTTTCTGAAG
 
. : . : . : . : . : . :
JMFF031L11- GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATAC
rJMFF031L11+ GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATACGGGGA
rJMFF016F04+ GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATACGGGGA
                      ____________________________________________________________
consensus GCAGAGAGTGAGAAATGGGAGAAGAACGCAGTGCAAGCTGAACAGGAGCTGATACGGGGA
 
. : . : . : . : . : . :
rJMFF031L11+ AAGACAAAATTGAGACAAGCTGGGAAACAAATTAGGAGTGTTATTCGCTCTGCCTATAAG
rJMFF016F04+ AAGACAAAATTGAGACAAGCTGGGAAACAAATTAGGAGTGTTATTCGCTCTGCCTATAAG
                      ____________________________________________________________
consensus AAGACAAAATTGAGACAAGCTGGGAAACAAATTAGGAGTGTTATTCGCTCTGCCTATAAG
 
. : . : . : . : . : . :
rJMFF031L11+ ATAGAAAGACAAGCTGCAGGTCTGAAAGATGTCCTCAAAGAGCTTCCACGAAGAGAAGCT
rJMFF016F04+ ATAGAAAGACAAGCTGCAGGTCTGAAAGATGTCCTCAAAGAGCTTCCACGAAGAGAAGCT
                      ____________________________________________________________
consensus ATAGAAAGACAAGCTGCAGGTCTGAAAGATGTCCTCAAAGAGCTTCCACGAAGAGAAGCT
 
. : . : . : . : . : . :
rJMFF031L11+ TCTTTGTTTAGATCACAAGTTTCCAACCTTGCTTCAGAGGCAAAGAAAGAAAGGAATTTT
rJMFF016F04+ TCTTTGTTTAGATCACAAGTTTCCAACCTTGCTTCAGAGGCAAAGAAAGAAAGGAATTTT
                      ____________________________________________________________
consensus TCTTTGTTTAGATCACAAGTTTCCAACCTTGCTTCAGAGGCAAAGAAAGAAAGGAATTTT
 
. : . : . : . : . : . :
rJMFF031L11+ CTTACTAAGGAGGTTACAAAAATAAGCAATCATGGCATCTCGGTCTGATTCAACCATTCT
rJMFF016F04+ CTTACTAAGGAGGTTACAAAAATAAGCAATCATGGCATCTCGGTCTGATTCAACCATTCT
                      ____________________________________________________________
consensus CTTACTAAGGAGGTTACAAAAATAAGCAATCATGGCATCTCGGTCTGATTCAACCATTCT
 
. : . : . : . : . : . :
rJMFF031L11+ CTATCCACATACTCTCTCTAGTAGTAGTAGTTTGACAGATGGATAATTGTATAAACTGTT
rJMFF016F04+ CTATCCACATACTCTCTCTAGTAGTAGTAGTTTGACAGATGGATAATTGTATAAACTGTT
                      ____________________________________________________________
consensus CTATCCACATACTCTCTCTAGTAGTAGTAGTTTGACAGATGGATAATTGTATAAACTGTT
 
. : . : . : . : . : . :
rJMFF031L11+ CCACCCAAATAAAAGCAATATTTAGGAGTTGTGATTATGAATTTACCATGAGGGAGGGGA
rJMFF016F04+ CCACCCAAATAAAAGCAATATTTAGGAGTTGTGATTATGAATTTACCATGAGGGAGGGGA
                      ____________________________________________________________
consensus CCACCCAAATAAAAGCAATATTTAGGAGTTGTGATTATGAATTTACCATGAGGGAGGGGA
 
. : . : . : . : . : . :
rJMFF031L11+ GAGGGGGGCTTCATCCCACAGGAGAACAAGTTTTTCTTACAACTCTCAGTCAGGCCAGAT
rJMFF016F04+ GAGGGGGGCTTCATCCCACAGGAGAACAAGTTTTTCTTACAACTCTCAGTCAGGCCAGAT
                      ____________________________________________________________
consensus GAGGGGGGCTTCATCCCACAGGAGAACAAGTTTTTCTTACAACTCTCAGTCAGGCCAGAT
 
. : . : . : . : . : . :
rJMFF031L11+ GGAAGTATTGGCCTTTTTAGTGATGGTGAAATGTTCAGTCAGGCCAGATGAAATGCTCAG
rJMFF016F04+ GGAAGTATTGGCCTTTTTAGTGATGGTGAAATGTTCAGTCAGGCCAGATGAAATGCTCAG
                      ____________________________________________________________
consensus GGAAGTATTGGCCTTTTTAGTGATGGTGAAATGTTCAGTCAGGCCAGATGAAATGCTCAG
 
. : . : . : . : . : . :
rJMFF031L11+ TATCAGAATGCCGTATAATATGGCACTTTAATTACTTGAAATTATTTTGAGGCAAGGCTT
rJMFF016F04+ TATCAGAATGCCGTATAATATGGCACTTTAATTACTTGAAATTATTTTGAGGCAAGGCTT
                      ____________________________________________________________
consensus TATCAGAATGCCGTATAATATGGCACTTTAATTACTTGAAATTATTTTGAGGCAAGGCTT
 
. : . : . : . : . : . :
rJMFF031L11+ CATATGTTTATCTTTTGACCTTATTTTGTACGTTTTTATCATGACCAACGATTGGAGA
rJMFF016F04+ CATATGTTTATCTTTTGACCTTATTTTGTACGTTTTTATCATGACCAACGATTGGAGAGA
                      ____________________________________________________________
consensus CATATGTTTATCTTTTGACCTTATTTTGTACGTTTTTATCATGACCAACGATTGGAGAGA