Contig 013668:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014O14Sequence581000785 (5)ref|XP_009765278.1|1e-57PREDICTED: uncharacterized protein LOC104216841 isoform X1 [Nicotiana sylvestri776013668 (4)ref|XP_009610506.1|1e-113PREDICTED: uncharacterized protein LOC104104198 isoform X1 [Nicotiana tomentosi
JMSF009E09Sequence491000785 (5)ref|XP_009765281.1|1e-41PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Nicotiana sylvestris]796013668 (4)ref|XP_009610506.1|5e-115PREDICTED: uncharacterized protein LOC104104198 isoform X1 [Nicotiana tomentosi
JMSF009L10Sequence472000785 (5)ref|XP_009765278.1|2e-27PREDICTED: uncharacterized protein LOC104216841 isoform X1 [Nicotiana sylvestri764013668 (4)ref|XP_009610506.1|6e-109PREDICTED: uncharacterized protein LOC104104198 isoform X1 [Nicotiana tomentosi
JMSF027F19Sequence637000785 (5)ref|XP_009765278.1|7e-69PREDICTED: uncharacterized protein LOC104216841 isoform X1 [Nicotiana sylvestri755013668 (4)ref|XP_009610506.1|5e-112PREDICTED: uncharacterized protein LOC104104198 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF009E09+                                      ATATATGAGGATGTGTCTTGGAANGAGGCTCT
                      ____________________________________________________________
consensus                                         ATATATGAGGATGTGTCTTGGAANGAGGCTCT
 
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rJMSF027F19+                TGCATCATGCCATGCGAGCATTTCGTGCAAATAATGGTGAAAGTGCAAAATCAA
rJMSF009E09+          TCCTGGTGCATCATGCCATGCGAGCATTTCGTGCAAATAATGTTGAAAGTGCAAAATCAA
rJMSF009L10+                TGCATCATGCCATGCGAGCA-TTCGTGCAAATAATGTTGAAAGTGCAAAATCAA
rJMFF014O14+                TGCATCATGCCATGCGAGCATTTCGTGCAAATAATGTTGAAAGTGCAAAATCAA
                      ____________________________________________________________
consensus             TCCTGGTGCATCATGCCATGCGAGCATTTCGTGCAAATAATGTTGAAAGTGCAAAATCAA
 
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rJMSF027F19+          GACTTAGCATATGTGCAGAAGATATTCGAGAACAAGTAGAAAGAATGGGAAATACATCAG
rJMSF009E09+          GACTTAGCATATGTGCAGAAGATATTCGAGAACAAGTAGAAAGAATGGGAAATACATCAG
rJMSF009L10+          GACTTAGCATATGTGCAGAAGATATTCGAGAACAAGTAGAAAGAATGGGAAATACATCAG
rJMFF014O14+          GACTTAGCATATGTGCAGAAGATATTCGAGAACAAGTAGAAAGAATGGGAAATACATCAG
                      ____________________________________________________________
consensus             GACTTAGCATATGTGCAGAAGATATTCGAGAACAAGTAGAAAGAATGGGAAATACATCAG
 
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rJMSF027F19+          AACTGTGCTCACAACTTGGAGCAGTTCTGGGTATGCTTGGTGATTGCTGCCGAGCTACAG
rJMSF009E09+          AACTGTGCTCACAACTTGGAGCAGTTCTGGGTATGCTTGGTGATTGCTGCCGAGCTACAG
rJMSF009L10+          AACTGTGCTCACAACTTGGAGCAGTTCTGGGTATGCTTGGTGATTGCTGCCGAGCTACAG
rJMFF014O14+          AACTGTGCTCACAACTTGGAGCAGTTCTGGGTATGCTTGGTGATTGCTGCCGAGCTACAG
                      ____________________________________________________________
consensus             AACTGTGCTCACAACTTGGAGCAGTTCTGGGTATGCTTGGTGATTGCTGCCGAGCTACAG
 
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rJMSF027F19+          GAGATGCCGCTTCTGCAGTCAAATATTTTGAAGAGAGTGTCAATTTTCTTTTAAAAGTGC
rJMSF009E09+          GAGATGCCGCTTCTGCAGTCAAATATTTTGAAGAGAGTGTCAATTTTCTTTTAAAAGTGC
rJMSF009L10+          GAGATGCCGCTTCTGCAGTCAAATATTTTGAAGAGAGTGTCAATTTTCTTTTAAAAGTGC
rJMFF014O14+          GAGATGCCGCTTCTGCAGTCAAATATTTTGAAGAGAGTGTCAATTTTCTTTTAAAAGTGC
                      ____________________________________________________________
consensus             GAGATGCCGCTTCTGCAGTCAAATATTTTGAAGAGAGTGTCAATTTTCTTTTAAAAGTGC
 
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rJMSF027F19+          CTAAAGATGATTTAGAGATAACACACACTCTTTCTGTCTCTCTAAATAAAATTGGAGACC
rJMSF009E09+          CTAAAGATGATTTAGAGATAACACACACTCTTTCTGTCTCTCTAAATAAAATTGGAGACC
rJMSF009L10+          CTAAAGATGATTTAGAGATAACACACACTCTTTCTGTCTCTCTAAATAAAATTGGAGACC
rJMFF014O14+          CTAAAGATGATTTAGAGATAACACACACTCTTTCTGTCTCTCTAAATAAAATTGGAGACC
                      ____________________________________________________________
consensus             CTAAAGATGATTTAGAGATAACACACACTCTTTCTGTCTCTCTAAATAAAATTGGAGACC
 
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rJMSF027F19+          TTAAATACTATGATGAAGATTTGCAAGCTGCAAGATCATATTATTTTCAAGCATTGGATA
rJMSF009E09+          TTAAATACTATGATGAAGATTTGCAAGCTGCAAGATCATATTATTTTCAAGCATTGGATA
rJMSF009L10+          TTAAATACTATGATGAAGATTTGCAAGCTGCAAGATCATATTATTTTCAAGCATTGGATA
rJMFF014O14+          TTAAATACTATGATGAAGATTTGCAAGCTGCAAGATCATATTATTTTCAAGCATTGGATA
                      ____________________________________________________________
consensus             TTAAATACTATGATGAAGATTTGCAAGCTGCAAGATCATATTATTTTCAAGCATTGGATA
 
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rJMSF027F19+          TTCGCCGCAATGCCATCAAGCAGCATTCTCAACCATCTCAGACCATAGATGTGGCCGTAT
rJMSF009E09+          TTCGCCGCAATGCCATCAAGCAGCATTCTCAACCATCTCAGACCATAGATGTGGCCGTAT
rJMSF009L10+          TTCGCCGCAATGCCATCAAGCAGCATTCTCAACCATCTCAGACCATAGATGTGGCCGTAT
rJMFF014O14+          TTCGCCGCAATGCCATCAAGCAGCATTCTCAACCATCTCAGACCATAGATGTGGCCGTAT
                      ____________________________________________________________
consensus             TTCGCCGCAATGCCATCAAGCAGCATTCTCAACCATCTCAGACCATAGATGTGGCCGTAT
 
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rJMSF027F19+          CACTTGCAAAAGTAGCTGATGTGGACAGAAATATTGGGAATGAGAAAACTGCAGTAGATG
rJMSF009E09+          CACTTGCAAAAGTAGCTGATGTGGACAGAAATATTGGGAATGAGAAAACTGCAGTAGATG
rJMSF009L10+          CACTTGCAAAAGTAGCTGATGTGGACAGAAATATTGGGAATGAGAAAACTGCAGTAGATG
rJMFF014O14+          CACTTGCAAAAGTAGCTGATGTGGACAGAAATATTGGGAATGAGAAAACTGCAGTAGATG
                      ____________________________________________________________
consensus             CACTTGCAAAAGTAGCTGATGTGGACAGAAATATTGGGAATGAGAAAACTGCAGTAGATG
 
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rJMSF027F19+          GATTTCAAGAAGCCATAGAAATGCTGCAATGTCTGAAACTAAATCCTGAAGAAGTTGGCC
rJMSF009E09+          GATTTCAAGAAGCCATAGAAATGCTGCAATGTCTGAAACTAAATCCTGAAGAAGTTGGCC
rJMSF009L10+          GATTTCAAGAAGCCATAGAAATGCTGCAATGTCTGAAACTAAATCCTGAAGAAGTTGGCC
rJMFF014O14+          GATTTCAAGAAGCCATAGAAATGCTGCAATGTCTGAAACTAAATCCTGAAGAAGTTGGCC
                      ____________________________________________________________
consensus             GATTTCAAGAAGCCATAGAAATGCTGCAATGTCTGAAACTAAATCCTGAAGAAGTTGGCC
 
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rJMSF027F19+          TTGAACAGCGGAGATTGTCGGTGCTCGAGTTCCTTAACAGTCAGCTTGGCAAGAAAGAGA
rJMSF009E09+          TTGAACAGCGGAGATTGTCGGTGCTCGAGTTCCTTAACAGTCAGCTTGGCAAGAAAGAGA
rJMSF009L10+          TTGAACAGCGGAGATTGTCGGTGCTCGAGTTCCTTAACAGTCAGCTTGGCAAGAAAGAGA
rJMFF014O14+          TTGAACAGCGGAGATTGTCGGTGCTCGAGTTCCTTAACAGTCAGCTTGGCAAGAAAGAGA
                      ____________________________________________________________
consensus             TTGAACAGCGGAGATTGTCGGTGCTCGAGTTCCTTAACAGTCAGCTTGGCAAGAAAGAGA
 
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rJMSF027F19+          CCAACTCAGGTTCTTGAGTGAAGATTTTCGTCTGTCCTTACGAGGGACCAACGTAAGAAA
rJMSF009E09+          CCAACTCAGGTTCTTGAGTGAAGATTTTCGTCTGTCCTTACGAGGGACCAACGTAAGAAA
rJMSF009L10+          CCAACTCAGGTTCTTGAGTGAAGATTTTCGTCTGTCCTTACGAGGGACCAACGTAAGAAA
rJMFF014O14+          CCAACTCAGGTTCTTGAGTGAAGATTTTCGTCTGTCCTTACGAGGGACCAACGTAAGAAA
                      ____________________________________________________________
consensus             CCAACTCAGGTTCTTGAGTGAAGATTTTCGTCTGTCCTTACGAGGGACCAACGTAAGAAA
 
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rJMSF027F19+          TATCTCTTTGTAAATGACTTGGAAATAAGTGATAGGTATTTCCATTA-CCTTGTTATATT
rJMSF009E09+          TATCTCTTTGTAAATGACTTGGAAATAAGTGATAGGTATTTCCATTA-CCTTGTTATATT
rJMSF009L10+          TATCTCTTTGTAAATGACTTGGAAATAAGTGATAGGTATTTCCATTACCCTTGTTATATT
rJMFF014O14+          TATCTCTTTGTAAATGACTTGGAAATAAGTGATAGGTATTTCCATTA-CCTTGTTATATT
                      ____________________________________________________________
consensus             TATCTCTTTGTAAATGACTTGGAAATAAGTGATAGGTATTTCCATTA-CCTTGTTATATT
 
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rJMSF027F19+          GTAACTCTGTGATATTTTCTAACTAGTACCCCCACGCT                      
rJMSF009E09+          GTAACTCTGTGATATTTTCTAACTAGTACCCCCACGCT                      
rJMSF009L10+          GTAACTCTGTGATATTTTCTAACTAGTACCCCCACGCT                      
rJMFF014O14+          GTAACTCTGTGATATTTTCTAACTAGTACCCCCACGCTTGAATGTTACAAAAAGAAATAA
                      ____________________________________________________________
consensus             GTAACTCTGTGATATTTTCTAACTAGTACCCCCACGCTTGAATGTTACAAAAAGAAATAA