Contig 013664:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014E02Sequence734013664 (3)ref|NP_001275280.1|1e-68branched-chain amino acid aminotransferase [Solanum tuberosum] gb|AAF07192.1|AF1
JMFF032A20Sequence547007765 (3)ref|XP_009630079.1|2e-70PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Ni721013664 (3)ref|NP_001275280.1|4e-66branched-chain amino acid aminotransferase [Solanum tuberosum] gb|AAF07192.1|AF1
JMSF007D18Sequence257007765 (3)gb|ABW76425.1|5e-07branched-chain aminotransferase [Nicotiana benthamiana]327013664 (3)emb|CDP02646.1|6e-52unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007D18+ GTCTTGCCCCAGCTCCTGAATATACTTTTA
                      ____________________________________________________________
consensus GTCTTGCCCCAGCTCCTGAATATACTTTTA
 
. : . : . : . : . : . :
rJMSF007D18+ TAATTTATGTATCCCCTGTGGGTAACTACTTCAAGGAAGGTTTAGCACCAATTAATCTGG
                      ____________________________________________________________
consensus TAATTTATGTATCCCCTGTGGGTAACTACTTCAAGGAAGGTTTAGCACCAATTAATCTGG
 
. : . : . : . : . : . :
rJMSF007D18+ TGGTTGAGACTGAAATGCATCGTGCGACCCCTGGGGGTACTGGAAGTGTCAAGACTATAG
rJMFF032A20+ AG
rJMFF014E02+ TGTCAAGACTATAG
                      ____________________________________________________________
consensus TGGTTGAGACTGAAATGCATCGTGCGACCCCTGGGGGTACTGGAAGTGTCAAGACTATAG
 
. : . : . : . : . : . :
rJMSF007D18+ GAAATTATGCTGCAGTCTTGAAGGCACAGAGTGCTGCTAAAGCAAAAGGCTATTCTGATG
rJMFF032A20+ GAAATTATGCTGCAGTCTNGAAGGCACAGAGTGCTGCTAAAGCAAAAGGCTATTCTGATG
rJMFF014E02+ GAAATTATGCTGCAGTCTTGAAGGCACAGAGTGCTGCTAAAGCAAAAGGCTATTCTGATG
                      ____________________________________________________________
consensus GAAATTATGCTGCAGTCTTGAAGGCACAGAGTGCTGCTAAAGCAAAAGGCTATTCTGATG
 
. : . : . : . : . : . :
rJMSF007D18+ TTCTGTACCTTGATAGTGTTCACAACAAATATCTGGAAGAAGTTTCTTCTTGCAATGTTT
rJMFF032A20+ TTCTGTACCTTGATAGTGTTCACAACAAATATCTGGAAGAAGTTTCTTCTTGCAATGTTT
rJMFF014E02+ TTCTGTACCTTGATAGTGTTCACAACAAATATCTGGAAGAAGTTTCTTCTTGCAATGTTT
                      ____________________________________________________________
consensus TTCTGTACCTTGATAGTGTTCACAACAAATATCTGGAAGAAGTTTCTTCTTGCAATGTTT
 
. : . : . : . : . : . :
rJMSF007D18+ TTATGGTGAAGGGTAATATGATAGCAACTCCTGCAATAAAAGGGACCATCTTGC
rJMFF032A20+ TTATGGTGAAGGGTAATATGATAGCAACTCCTGCAATAAAAGGGACCATCTTGCCTGGTA
rJMFF014E02+ TTATGGTGAAGGGTAATATGATAGCAACTCCTGCAATAAAAGGGACCATCTTGCCTGGTA
                      ____________________________________________________________
consensus TTATGGTGAAGGGTAATATGATAGCAACTCCTGCAATAAAAGGGACCATCTTGCCTGGTA
 
. : . : . : . : . : . :
rJMFF032A20+ TTACCCGGAAAAGCATAATTGATGTTGCAGTCAACCAAGGTTTCCAGGTTGAGGAACGAG
rJMFF014E02+ TTACCCGGAAAAGCATAATTGATGTTGCAGTCAACCAAGGTTTCCAGGTTGAGGAACGAG
                      ____________________________________________________________
consensus TTACCCGGAAAAGCATAATTGATGTTGCAGTCAACCAAGGTTTCCAGGTTGAGGAACGAG
 
. : . : . : . : . : . :
rJMFF032A20+ CAGTCTCAGTGGATGAATTGCTTGATGCTGATGAAGTGTTCTGTACGGGAACAGCTGTGG
rJMFF014E02+ CAGTCTCAGTGGATGAATTGCTTGATGCTGATGAAGTGTTCTGTACGGGAACAGCTGTGG
                      ____________________________________________________________
consensus CAGTCTCAGTGGATGAATTGCTTGATGCTGATGAAGTGTTCTGTACGGGAACAGCTGTGG
 
. : . : . : . : . : . :
rJMFF032A20+ TTGTATCACCAGTCGGAAGCATAACCCATTTAGGGAAAAAGGTGACATATGGGAGCAATG
rJMFF014E02+ TTGTATCACCAGTCGGAAGCATAACCCATTTAGGGAAAAAGGTGACATATGGGAGCAATG
                      ____________________________________________________________
consensus TTGTATCACCAGTCGGAAGCATAACCCATTTAGGGAAAAAGGTGACATATGGGAGCAATG
 
. : . : . : . : . : . :
rJMFF032A20+ GAGTTGGTCTTGTTTCACAACAGCTGTACTCCACACTTACTCAACTTCAGATGGGGATTA
rJMFF014E02+ GAGTTGGTCTTGTTTCACAACAGCTGTACTCCACACTTACTCAACTTCAGATGGGGATTA
                      ____________________________________________________________
consensus GAGTTGGTCTTGTTTCACAACAGCTGTACTCCACACTTACTCAACTTCAGATGGGGATTA
 
. : . : . : . : . : . :
rJMFF032A20+ CAGAGGATAAGATGGGGTGGGTTGTTGAAGTGAAGTAATCTTGAACTCATGAGATACCTA
rJMFF014E02+ CAGAGGATAAGATGGGGTGGGTTGTTGAAGTGAAGTAATCTTGAACTCATGAGATACCTA
                      ____________________________________________________________
consensus CAGAGGATAAGATGGGGTGGGTTGTTGAAGTGAAGTAATCTTGAACTCATGAGATACCTA
 
. : . : . : . : . : . :
rJMFF032A20+ GTAGTTATTACCTTCTTTTTCAAGAAGTTTGAACTCAGAAGATATTAGCAACTAGTGATC
rJMFF014E02+ GTAGTTATTACCTTCTTTTTCAAGAAGTTTGAACTCAGAAGATATTAGCAACTAGTGATC
                      ____________________________________________________________
consensus GTAGTTATTACCTTCTTTTTCAAGAAGTTTGAACTCAGAAGATATTAGCAACTAGTGATC
 
. : . : . : . : . : . :
rJMFF032A20+ CGCTTGTCGGACTTTGTGTTCTTGTTTGTTTACAGATTCATTCCATTGTGTACAGAATCT
rJMFF014E02+ CGCTTGTCGGACTTTGTGTTCTTGTTTGTTTACAGATTCATTCCATTGTGTACAGAATCT
                      ____________________________________________________________
consensus CGCTTGTCGGACTTTGTGTTCTTGTTTGTTTACAGATTCATTCCATTGTGTACAGAATCT
 
. : . : . : . : . : . :
rJMFF032A20+ GCCTTTTTCTATATTGTTTCCGGGGAAACACCTTGCTTTGAATTGTGCCTTTTTCTCTCT
rJMFF014E02+ GCCTTTTTCTATATTGTTTCCGGGGAAACACCTTGCTTTGAATTGTGCCTTTTTCTCTCT
                      ____________________________________________________________
consensus GCCTTTTTCTATATTGTTTCCGGGGAAACACCTTGCTTTGAATTGTGCCTTTTTCTCTCT
 
. : . : . : . : . : . :
rJMFF032A20+ CTCTAGCTCGCTCTTGGTAAAGAGAGAGGGTAATTAACTTCGAACTAGATTCAATTACT
rJMFF014E02+ CTCTAGCTCGCTCTTGGTAAAGAGAGAGGGTAATTAACTTCGAACTAGATTCAATTACTT
                      ____________________________________________________________
consensus CTCTAGCTCGCTCTTGGTAAAGAGAGAGGGTAATTAACTTCGAACTAGATTCAATTACTT