Contig 013652:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF012A23+                                                            ATGAAAATTT
                      ____________________________________________________________
consensus                                                               ATGAAAATTT
 
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rJMFF012A23+          CCGGTATGGAGGTAGCAGAAGACACAACGTTTATGACCGAGGTTGTTTGAATAACTTCTT
                      ____________________________________________________________
consensus             CCGGTATGGAGGTAGCAGAAGACACAACGTTTATGACCGAGGTTGTTTGAATAACTTCTT
 
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rJMFF033A18+                     GCACAAAAGTAAAGCNTTCACGAAACAACTTCCGAGCTTTCGTACAAGA
rJMFF012A23+          TGAAGTATTTTGCACAAAAGTAAAGCCTTCACGAAACAACTTCCAAGCTTTCGTACAAGA
                      ____________________________________________________________
consensus             TGAAGTATTTTGCACAAAAGTAAAGCCTTCACGAAACAACTTCCGAGCTTTCGTACAAGA
 
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rJMFF033A18+          GGTGCCACAAAGACCGTCTATGCCCACAGCTCGGGAGGTCGACTACGAGGAAATGGGCGA
rJMFF012A23+          GGTGCCACAAAGACCGTCTATGCCCACAGCTCGGGAGGTCGACTACGAGGAAATGGGCGA
                      ____________________________________________________________
consensus             GGTGCCACAAAGACCGTCTATGCCCACAGCTCGGGAGGTCGACTACGAGGAAATGGGCGA
 
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rJMFF033A18+          GGATCGACGTGCAAAAGTAGAGGACGATCTAGACTTTGGCGGGGACCTTTTAAAGATCTC
rJMFF012A23+          GGATCGACGTGCAAAAGTAGAGGACGATCTAGACTTTGGCGGGGACCTTTTAAAGATCTC
                      ____________________________________________________________
consensus             GGATCGACGTGCAAAAGTAGAGGACGATCTAGACTTTGGCGGGGACCTTTTAAAGATCTC
 
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rJMFF033A18+          GCAGCGTCATAATATTGGAGATATTGAAGCAGACATTCGTAGCCGAGGGAGTGATCGTGA
rJMFF012A23+          GCAGCGTCATAATATTGGAGATATTGAAGCAGACATTCGTAGCCGAGGGAGTGATCGTGA
                      ____________________________________________________________
consensus             GCAGCGTCATAATATTGGAGATATTGAAGCAGACATTCGTAGCCGAGGGAGTGATCGTGA
 
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rJMFF033A18+          TGGGCCCCACAATAACTCTTCGGACGCTGATTCTGTTCTCAACTCAGATAGGCGGCCCGC
rJMFF012A23+          TGGGCCCCACAATAACTCTTCGGACGCTGATTCTGTTCTCAACTCAGATAGGCGGCCCGC
                      ____________________________________________________________
consensus             TGGGCCCCACAATAACTCTTCGGACGCTGATTCTGTTCTCAACTCAGATAGGCGGCCCGC
 
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rJMFF033A18+          AACCGCCACCCAGTCGGACACACGGCAATCGAGTTGGGGAAGAAGCGGGAGTTTGGAAAT
rJMFF012A23+          AACCGCCACCCAGTCGGACACACGGCAATCGAGTTGGGGAAGAAGCGGGAGTTTGGAAAT
                      ____________________________________________________________
consensus             AACCGCCACCCAGTCGGACACACGGCAATCGAGTTGGGGAAGAAGCGGGAGTTTGGAAAT
 
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rJMFF033A18+          CGCGCAGGATGGTGTTAATAGGAACTCGGATTTTCACTGAGGGCAAAGGGGGAAGCGTAT
rJMFF012A23+          CGCGCAGGATGGTGTTAATAGGAACTCGGATTTTCACTGAGGGCAAAGGGGGAAGCGTAT
                      ____________________________________________________________
consensus             CGCGCAGGATGGTGTTAATAGGAACTCGGATTTTCACTGAGGGCAAAGGGGGAAGCGTAT
 
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rJMFF033A18+          ATCGATGAGAAGTATCGTTTTTGGTGTATGGTTTTGAAGGAAATGTGGCATTGATAGGAC
rJMFF012A23+          ATCGATGAGAAGTATCGTTTTTGGTGTATGGTTTTGAAGGAAATGTGGCATTGATAGGAC
                      ____________________________________________________________
consensus             ATCGATGAGAAGTATCGTTTTTGGTGTATGGTTTTGAAGGAAATGTGGCATTGATAGGAC
 
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rJMFF033A18+          TCAAGTTCACTGATATGGAATCAAATCTTACTTTTAGGGTACACTGTGTGCTATAATTTT
rJMFF012A23+          TCAAGTTCACTGATATGGAATCAAATCTTACTTTTAGGGTACACTGTGTGCTATAATTTT
                      ____________________________________________________________
consensus             TCAAGTTCACTGATATGGAATCAAATCTTACTTTTAGGGTACACTGTGTGCTATAATTTT
 
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rJMFF033A18+          CTTTCATCATTTTCCCTGAACTTCACAGTAGCTGTTATATATTTGTTTGCTTGA-GAGCC
rJMFF012A23+          CTTTCATCATTTTCCCTGAACTTCACAGTAGCTGTTATATATTTGTTTGCTTGAGGAGCC
                      ____________________________________________________________
consensus             CTTTCATCATTTTCCCTGAACTTCACAGTAGCTGTTATATATTTGTTTGCTTGAGGAGCC
 
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rJMFF033A18+          ATGAATAGGGTATGCATGCATGGTTGTAATAGATTAGAATGGCAGCATTTATACTTTTCT
rJMFF012A23+          ATGAATAGGGTATGCATGCATGGTTGTAATAGATTAGAATGGCAGCATTTATACTTTTCT
                      ____________________________________________________________
consensus             ATGAATAGGGTATGCATGCATGGTTGTAATAGATTAGAATGGCAGCATTTATACTTTTCT
 
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rJMFF033A18+          TGAACTTCATTTTCTGGTGT                                        
rJMFF012A23+          TGAACTTCATTTTCTGGTGTTCATGCCTGGTTGATTTGTGGAACTGTCTCTTTTACAGAT
                      ____________________________________________________________
consensus             TGAACTTCATTTTCTGGTGTTCATGCCTGGTTGATTTGTGGAACTGTCTCTTTTACAGAT