Contig 013651:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011O12Sequence594003858 (3)ref|XP_009761283.1|128PREDICTED: uncharacterized protein LOC104213475 [Nicotiana sylvestris]733013651 (3)emb|CDO99871.1|3e-18unnamed protein product [Coffea canephora]
JMSF044D12Sequence713003858 (3)ref|XP_006345860.1|1e-33PREDICTED: micronuclear linker histone polyprotein-like isoform X2 [Solanum tub734013651 (3)emb|CDO99871.1|9e-11unnamed protein product [Coffea canephora]
JMSF044H20Sequence710003858 (3)ref|XP_006345860.1|6e-33PREDICTED: micronuclear linker histone polyprotein-like isoform X2 [Solanum tub634013651 (3)emb|CDO99871.1|1e-07unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF044D12+ GCGAGTGAAATTCGTGGAAGAACGGAGATTCCTG
rJMFF011O12+ AACGGAGATTCCTG
                      ____________________________________________________________
consensus GCGAGTGAAATTCGTGGAAGAACGGAGATTCCTG
 
. : . : . : . : . : . :
rJMSF044D12+ CCGGATGNCCCGGCACTTTTCAGATTGCCAACAGACTTACATCGGGATACAACTTCTATT
rJMFF011O12+ CCGGATG-CCCGGCACTTTTCAGATTGCCAACAGACTTACATCGGGATACAACTTCTATT
                      ____________________________________________________________
consensus CCGGATGNCCCGGCACTTTTCAGATTGCCAACAGACTTACATCGGGATACAACTTCTATT
 
. : . : . : . : . : . :
rJMSF044H20+ CTCTACAATTCAGTATGGTAAATCGNTCCCCTGAAACTGTTTCCGATATGTTCTTCCCC
rJMSF044D12+ CCTCTACAATTCAGTATGGTAAATCGTTCCCCTGAAACTGTTTCCGATATGTTCTTCCCC
rJMFF011O12+ CCTCTACAATTCAGTATGGTAAATCGTTCCCCTGAAACTGTTTCCGATATGTTCTTCCCC
                      ____________________________________________________________
consensus CCTCTACAATTCAGTATGGTAAATCGTTCCCCTGAAACTGTTTCCGATATGTTCTTCCCC
 
. : . : . : . : . : . :
rJMSF044H20+ AGCCATTTCCTCGAGTCTCGATCTACCTCTTCTGCAGGGAGTCCATTCTCTTCCATCCCC
rJMSF044D12+ AGCCATTTCCTCGAGTCTCGATCTACCTCTTCTGCAGGGAGTCCATTCTCTTCCATCCCC
rJMFF011O12+ AGCCATTTCCTCGAGTCTCGATCTACCTCTTCTGCAGGGAGTCCATTCTCTTCCATCCCC
                      ____________________________________________________________
consensus AGCCATTTCCTCGAGTCTCGATCTACCTCTTCTGCAGGGAGTCCATTCTCTTCCATCCCC
 
. : . : . : . : . : . :
rJMSF044H20+ ACCAACCCTTCTATACAAATTGGATCAAGAAATGCACCGTGGAGGCCAATGTTTGAGCCT
rJMSF044D12+ ACCAACCCTTCTATACAAATTGGATCAAGAAATGCACCGTGGAGGCCAATGTTTGAGCCT
rJMFF011O12+ ACCAACCCTTCTATACAAATTGGATCAAGAAATGCACCGTGGAGGCCAATGTTTGAGCCT
                      ____________________________________________________________
consensus ACCAACCCTTCTATACAAATTGGATCAAGAAATGCACCGTGGAGGCCAATGTTTGAGCCT
 
. : . : . : . : . : . :
rJMSF044H20+ TCCGTTAATACCAGTCTACCCTCTTCCTCAAGATCGAATCTTTTCGATCCTCAGTCAAGT
rJMSF044D12+ TCCGTTAATACCAGTCTACCCTCTTCCTCAAGATCGAATCTTTTCGATCCTCAGTCAAGT
rJMFF011O12+ TCCGTTAATACCAGTCTACCCTCTTCCTCAAGATCGAATCTTTTCGATCCTCAGTCAAGT
                      ____________________________________________________________
consensus TCCGTTAATACCAGTCTACCCTCTTCCTCAAGATCGAATCTTTTCGATCCTCAGTCAAGT
 
. : . : . : . : . : . :
rJMSF044H20+ GCAGCCAGTCCTTTTTCTAGTAACCATAGTTTCCCAACCTACCCTTTCTCCCCTGCCATG
rJMSF044D12+ GCAGCCAGTCCTTTTTCTAGTAACCATAGTTTCCCAACCTACCCTTTCTCCCCTGCCATG
rJMFF011O12+ GCAGCCAGTCCTTTTTNTAGTAACCATAGTTTCCCAACCTACCCTTTCTCCCCTGCCATG
                      ____________________________________________________________
consensus GCAGCCAGTCCTTTTTCTAGTAACCATAGTTTCCCAACCTACCCTTTCTCCCCTGCCATG
 
. : . : . : . : . : . :
rJMSF044H20+ ACCCCGCAATTATCTTCTCCCATCGGATTCTCATCCGCCCATTCTGCCCGGGAAAACAAC
rJMSF044D12+ ACCCCGCAATTATCTTCTCCCATCGGATTCTCATCCGCCCATTCTGCCCGGGAAAACAAC
rJMFF011O12+ ACCCCGCAATTATCTTCTCCCATCGGATTCTCATCCGCCCATTCTGCCCGGGAAAACAAC
                      ____________________________________________________________
consensus ACCCCGCAATTATCTTCTCCCATCGGATTCTCATCCGCCCATTCTGCCCGGGAAAACAAC
 
. : . : . : . : . : . :
rJMSF044H20+ ACACCACCTCCTGCAACACGCTTCTCGCTCTACGATGATCATGTAAGACCAAATATGCAC
rJMSF044D12+ ACACCACCTCCTGCAACACGCTTCTCGCTCTACGATGATCATGTAAGACCAAATATGCAC
rJMFF011O12+ ACACCACCTCCTGCAACACGCTTCTCGCTNTACGATGATCATGTAAGACCAAATATGCAC
                      ____________________________________________________________
consensus ACACCACCTCCTGCAACACGCTTCTCGCTCTACGATGATCATGTAAGACCAAATATGCAC
 
. : . : . : . : . : . :
rJMSF044H20+ AGGTAGTATCTTGCTACTGTTTTTATAGCCATGCAGTTTTAATGTCTGAATGAAGATATT
rJMSF044D12+ AGGTAGTATCTTGCTACTGTTTTTATAGCCATGCAGTTTTAATGTCTGAATGAAGATATT
rJMFF011O12+ AGGTAGTATCTTGCTACTGTTTTTATAGCCATGCAGTTTTAATGTCTGAATGAAGATATT
                      ____________________________________________________________
consensus AGGTAGTATCTTGCTACTGTTTTTATAGCCATGCAGTTTTAATGTCTGAATGAAGATATT
 
. : . : . : . : . : . :
rJMSF044H20+ TTTATTTGGGTTATATATTGTCATTTATTGCAACTGGGCACTTAGGTTTATAAATGTTTT
rJMSF044D12+ TTTATTTGGGTTATATATTGTCATTTATTGCAACTGGGCACTTAGGTTTATAAATGTTTT
rJMFF011O12+ TTTATTTGGGTTATATATTGTCATTTATTGCAACTGGGCACTTAGGTTTATAAATGTTTT
                      ____________________________________________________________
consensus TTTATTTGGGTTATATATTGTCATTTATTGCAACTGGGCACTTAGGTTTATAAATGTTTT
 
. : . : . : . : . : . :
rJMSF044H20+ ATAAGCAGCTGTTGTTGTATCTAAGATATATATTGGCTTGTAAACTTTTACAGTAGCTCA
rJMSF044D12+ ATAAGCAGCTGTTGTTGTATCTAAGATATATATTGGCTTGTAAACTTTTACAGTAGCTCA
rJMFF011O12+ ATAAGCAGCTGTTGTTGTATCTAAGATATATATTGGCTTGTAAACTTTTACAGTAGCTCA
                      ____________________________________________________________
consensus ATAAGCAGCTGTTGTTGTATCTAAGATATATATTGGCTTGTAAACTTTTACAGTAGCTCA
 
. : . : . : . : . : . :
rJMSF044H20+ TAGAAATGCGGTTTGTAAGAAGGTAATAAACAAC
rJMSF044D12+ TAGAAATGCGGTTTGTAAGAAGGTAATAAACAAC
rJMFF011O12+ TAGAAATGCGGTTTGTAAGAAGGTAATAAACAACATATATGTATTTTTCATGTTAATAAG
                      ____________________________________________________________
consensus TAGAAATGCGGTTTGTAAGAAGGTAATAAACAACATATATGTATTTTTCATGTTAATAAG