| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011B17 | Sequence | 545 | 011592 (7) | ref|XP_006431097.1| | 4e-65 | hypothetical protein CICLE_v10013776mg [Citrus clementina] gb|ESR44337.1| hypoth | 743 | 013646 (3) | ref|XP_010322561.1| | 1e-50 | PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum] |
| JMFF020K15 | Sequence | 527 | 011592 (7) | ref|XP_006431097.1| | 2e-61 | hypothetical protein CICLE_v10013776mg [Citrus clementina] gb|ESR44337.1| hypoth | 742 | 013646 (3) | ref|XP_010322561.1| | 2e-52 | PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum] |
| JMFF037I20 | Sequence | 554 | 011592 (7) | gb|KDO72510.1| | 5e-60 | hypothetical protein CISIN_1g039529mg [Citrus sinensis] | 738 | 013646 (3) | ref|XP_010322561.1| | 2e-53 | PREDICTED: serine carboxypeptidase-like 46 isoform X3 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF037I20+ A
____________________________________________________________
consensus A
. : . : . : . : . : . :
rJMFF037I20+ ATGTCGGAAGATTGCTCTGACATAAATGTTATGATTTCGGAGGAAATTGGGGATGATATG
rJMFF020K15+ CGGAAGATTGCTCTGACATAAATGTTATGATTTCGGAGGAAATTGGGGATGATATG
____________________________________________________________
consensus ATGTCGGAAGATTGCTCTGACATAAATGTTATGATTTCGGAGGAAATTGGGGATGATATG
. : . : . : . : . : . :
rJMFF037I20+ CATAAGGACAATTTACTCTTTCAATCATGCCAAACCGACCAATACTCATCATCTCAACGA
rJMFF020K15+ CATAAGGACAATTTACTCTTTCAATCATGCCAAACCGACCAATACTCATCATCTCAACGA
____________________________________________________________
consensus CATAAGGACAATTTACTCTTTCAATCATGCCAAACCGACCAATACTCATCATCTCAACGA
. : . : . : . : . : . :
rJMFF037I20+ CATTGTCTTGGTACTGAAACAGCCAAAGCTGATCCATGCCTTCTTACTTGGGTAGATGAC
rJMFF020K15+ CATTGTCTTGGTACTGAAACAGCCAAAGCTGATCCATGCCTTCTTACTTGGGTAGATGAC
____________________________________________________________
consensus CATTGTCTTGGTACTGAAACAGCCAAAGCTGATCCATGCCTTCTTACTTGGGTAGATGAC
. : . : . : . : . : . :
rJMFF037I20+ TACTTAAGCAGGCCAGAAGTTCAGGAAGCTTTACATGCCAATGCATCTACTTGGGATTCT
rJMFF020K15+ TACTTAAGCAGGCCAGAAGTTCAGGAAGCTTTACATGCCAATGCATCTACTTGGGATTCT
____________________________________________________________
consensus TACTTAAGCAGGCCAGAAGTTCAGGAAGCTTTACATGCCAATGCATCTACTTGGGATTCT
. : . : . : . : . : . :
rJMFF037I20+ ATTTTTCATGGGAGGAATATGATTTTGAACAACCTTGCTATTGACATATTGCCAACATTG
rJMFF020K15+ ATTTTTCATGGGAGGAATATGATTTTGAACAACCTTGCTATTGACATATTGCCAACATTG
rJMFF011B17+ TGATTTTGAACAACCTTGCTATTGACATATTGCCAACATTG
____________________________________________________________
consensus ATTTTTCATGGGAGGAATATGATTTTGAACAACCTTGCTATTGACATATTGCCAACATTG
. : . : . : . : . : . :
rJMFF037I20+ TCAGCACTTCTAAAGAGGGGTATCCCACTTCTGATTTACAGTGGAGATGAAGATTTAAGG
rJMFF020K15+ TCAGCACTTCTAAAGAGGGGTATCCCACTTCTGATTTACAGTGGAGATGAAGATTTAAGG
rJMFF011B17+ TCAGCACTTCTAAAGAGGGGTATCCCACTTCTGATTTACAGTGGAGATGAAGATTTAAGG
____________________________________________________________
consensus TCAGCACTTCTAAAGAGGGGTATCCCACTTCTGATTTACAGTGGAGATGAAGATTTAAGG
. : . : . : . : . : . :
rJMFF037I20+ ATCCCTGTGTCACACACTAGAGAACTTGCAAACGTGCTTGCTACACGCTTGAACCTAACC
rJMFF020K15+ ATCCCTGTGTCACACACTAGAGAACTTGCAAACGTGCTTGCTACACGCTTGAACCTAACC
rJMFF011B17+ ATCCCTGTGTCACACACTAGAGAACTTGCAAACGTGCTTGCTACACGCTTGAACCTAACC
____________________________________________________________
consensus ATCCCTGTGTCACACACTAGAGAACTTGCAAACGTGCTTGCTACACGCTTGAACCTAACC
. : . : . : . : . : . :
rJMFF037I20+ GCTATGGAGATGAATGAACCTTGGTATGATGGCAAGCAGATTGGAGGATGGAGTCAAACA
rJMFF020K15+ ACTATGGAGATGAATGAACCTTGGTATGATGGCAAGCAGATTGGAGGATGGAGTCAAACA
rJMFF011B17+ ACTATGGAGATGAATGAACCTTGGTATGATGGCAAGCAGATTGGAGGATGGAGTCAAACA
____________________________________________________________
consensus ACTATGGAGATGAATGAACCTTGGTATGATGGCAAGCAGATTGGAGGATGGAGTCAAACA
. : . : . : . : . : . :
rJMFF037I20+ TTCGGAAATTCGGGTGGAGGTGAAAAGGTGGCAAATTTGACATTTGCAACAGTAAGGGGT
rJMFF020K15+ TTCGGAAATTCGGGTGGAGGTGAAAAGGTGGCAAATTTGACATTTGCAACAGTAAGGGGT
rJMFF011B17+ TTCGGAAATTCGGGTGGAGGTGAAAAGGTGGCAAATTTGACATTTGCAACAGTAAGGGGT
____________________________________________________________
consensus TTCGGAAATTCGGGTGGAGGTGAAAAGGTGGCAAATTTGACATTTGCAACAGTAAGGGGT
. : . : . : . : . : . :
rJMFF037I20+ GGATCTCATTTTGTCCCAAATTCATCTCCCTCAAAAGCTCTCACACTTTTTAAGGCATTT
rJMFF020K15+ GGATCTCATTTTGTCCCAAATTCATCTCCCTCAAAAGCTCTCACACTTTTTAAGGCATTT
rJMFF011B17+ GGATCTCATTTTGTCCCAAATTCATCTCCCTCAAAAGCTCTCACACTTTTTAAGGCATTT
____________________________________________________________
consensus GGATCTCATTTTGTCCCAAATTCATCTCCCTCAAAAGCTCTCACACTTTTTAAGGCATTT
. : . : . : . : . : . :
rJMFF037I20+ CTTAAAGGATCTCCACCACCCAACACTCACCCGGACCACTATTTAGTGGCATTGCCCAAA
rJMFF020K15+ CTTAAAGGATCTCCACCACCCAACACTCACCCGGACCACTATTTAGTGGCATTGCCCAAA
rJMFF011B17+ CTTAAAGGATCTCCACCACCCAACACTCACCCGGACCACTATTTAGTGGCATTGCCCAAA
____________________________________________________________
consensus CTTAAAGGATCTCCACCACCCAACACTCACCCGGACCACTATTTAGTGGCATTGCCCAAA
. : . : . : . : . : . :
rJMFF037I20+ TACTAACTCTTATATTTGTATTCAAGTATTTATATTCCTAGATATTGTCCCGTGCGATGC
rJMFF020K15+ TACTAACTCTTATATTTGTATTCAAGTATTTATATTCCTAGATATTGTCCCGTGCGATGC
rJMFF011B17+ TACTAACTCTTATATTTGTATTCAAGTATTTATATTCCTAGATATTGTCCCGTGCGATGC
____________________________________________________________
consensus TACTAACTCTTATATTTGTATTCAAGTATTTATATTCCTAGATATTGTCCCGTGCGATGC
. : . : . : . : . : . :
rJMFF037I20+ ACTGGGTAAATACAGTT
rJMFF020K15+ ACTGGGTAAATACAGTTTTAATAAAA
rJMFF011B17+ ACTGGGTAAATACAGTTTTAATAAAAATAAAGCGTTGTTTCAAAATAAAATAAAATAAAA
____________________________________________________________
consensus ACTGGGTAAATACAGTTTTAATAAAAATAAAGCGTTGTTTCAAAATAAAATAAAATAAAA