Contig 013634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N06Sequence730013634 (7)gb|AAC49564.1|5e-61lectin [Calystegia sepium]
JMFF023J16Sequence467013634 (7)gb|AAC49564.1|1e-47lectin [Calystegia sepium]717013634 (7)gb|AAC49564.1|4e-61lectin [Calystegia sepium]
JMFN010A20Sequence619013634 (7)gb|AAG10403.1|AF233284_12e-73mannose-binding lectin [Convolvulus arvensis]
JMFN036A21Sequence554013634 (7)gb|AAG10403.1|AF233284_11e-72mannose-binding lectin [Convolvulus arvensis]
JMSF015O02Sequence381013634 (7)gb|AAC49564.1|8e-38lectin [Calystegia sepium]718013634 (7)gb|AAC49564.1|1e-61lectin [Calystegia sepium]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015O02- ATTTTTTTCAATAA
                      ____________________________________________________________
consensus ATTTTTTTCAATAA
 
. : . : . : . : . : . :
rJMSF015O02- AAATATTGATTGAAGACACATATATTATTAAAGAGCAAAGTATAAAAACAACTTTATTTA
rJMFF023J16- ACTTTATTTA
rJMFF008N06- ACTTTATTTA
                      ____________________________________________________________
consensus AAATATTGATTGAAGACACATATATTATTAAAGAGCAAAGTATAAAAACAACTTTATTTA
 
. : . : . : . : . : . :
rJMSF015O02- TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
rJMFF023J16- TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
rJMFF008N06- TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
                      ____________________________________________________________
consensus TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
 
. : . : . : . : . : . :
rJMSF015O02- AACATTATTCAAACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
rJMFF023J16- AACATTATTCAAACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
JMFN036A21+ ATTCATACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
JMFN010A20+ CATTATTCATACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
rJMFF008N06- AACATTATTCANACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
                      ____________________________________________________________
consensus AACATTATTCATACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
 
. : . : . : . : . : . :
rJMSF015O02- GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
rJMFF023J16- GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
JMFN036A21+ GGAGCAATACTTCAGCTTGAGAGTGACAATAGATCAATAATATAATCACTTATTAGAATT
JMFN010A20+ GGAGCAATACTTCAGCTTGAGAGTGACAATAGATCAATAATATAATCACTTATTAGAATT
rJMFF008N06- GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
                      ____________________________________________________________
consensus GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
 
. : . : . : . : . : . :
rJMSF015O02- ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
JMFF023J16+ T
rJMFF023J16- ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
JMFN036A21+ ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
JMFN010A20+ ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
rJMFF008N06- ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
                      ____________________________________________________________
consensus ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
 
. : . : . : . : . : . :
rJMSF015O02- GGGAACGACATGCACGGGATGGAATGTCTCTCCATCAGTGTGGCCAAAAGGCCCGTAGTC
JMFF023J16+ GGGAACGACATGCACGGGATGGAATGTCTCTACATCAGTGTGGCCAAAAGGCCCGTAGTC
rJMFF023J16- GGGAACGACATGCACGGGATGGAATGTCTCTACATCAGTGTGGCCAAAAGGCCCGTAGTC
JMFN036A21+ GGGAACGACACGCACAGGACTGAACGGCTCTCCAACATTGGGGCCAAAAGGCCCGTAGTC
JMFN010A20+ GGGAACGACACGCACAGGACTGAACGGCTCTCCAACATTGGGGCCAAAAGGCCCGTAGTC
rJMFF008N06- GGGAACGACATGCACGGGATGGAATGTCTCTACATCAGTGTGGCCAAAAGGCCCGTAGTC
                      ____________________________________________________________
consensus GGGAACGACATGCACGGGATGGAATGTCTCTCCATCAGTGTGGCCAAAAGGCCCGTAGTC
 
. : . : . : . : . : . :
rJMSF015O02- TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
JMFF023J16+ TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
JMSF015O02+ AACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
rJMFF023J16- TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
JMFN036A21+ TTTCAAATTGGTAGTGAACTTTATTGAACGTAAGACATTGTTATCCAGGTAAATTCCAAA
JMFN010A20+ TTTCAAATTGGTAGTGAACTTTATTGAACGTAAGACATTGTTATCCAGGTAAATTCCAAA
rJMFF008N06- TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
                      ____________________________________________________________
consensus TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
 
. : . : . : . : . : . :
rJMSF015O02- TGTTCCACTTATATGTTCCAAGCGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
JMFF023J16+ TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
JMSF015O02+ TGTTCCACTTATATGTTCCAAGCGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
rJMFF023J16- TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
JMFN036A21+ CGTTCCACTTATATCAACTAAGTATTCATCCGCGTTATCAATATTCACCGTGTCAGTGTT
JMFN010A20+ CGTTCCACTTATATCAACTAAGTATTCATCCGCGTTATCAATATTCACCGTGTCAGTGTT
rJMFF008N06- TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
                      ____________________________________________________________
consensus TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
 
. : . : . : . : . : . :
rJMSF015O02- AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
JMFF023J16+ AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
JMSF015O02+ AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
rJMFF023J16- AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
JMFN036A21+ AACGATGCGGTCTGGTCCTGCTCCTCCTACTGTGATTGTATCCTTTGAACCATCATCTTT
JMFN010A20+ AACGATGCGGTCTGGTCCTGCTCCTCCTACTGTGATTGTATCCTTTGAACCATCATCTTT
rJMFF008N06- AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
                      ____________________________________________________________
consensus AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
 
. : . : . : . : . : . :
rJMSF015O02- AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
JMFF023J16+ AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
JMSF015O02+ AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
rJMFF023J16- AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
JMFN036A21+ AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTTACCAGAG------GCATAGTGAATGAC
JMFN010A20+ AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTTACCAGAG------GCATAGTGAATGAC
rJMFF008N06- AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
                      ____________________________________________________________
consensus AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
 
. : . : . : . : . : . :
rJMSF015O02- TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMFF023J16+ TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMSF015O02+ TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
rJMFF023J16- TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMFN036A21+ TATCTGGTTTATCTTGTTTACTGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMFN010A20+ TATCTGGTTTATCTTGTTTACTGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
rJMFF008N06- TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
                      ____________________________________________________________
consensus TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
 
. : . : . : . : . : . :
rJMSF015O02- TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTT
JMFF023J16+ TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
JMSF015O02+ TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
rJMFF023J16- TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
JMFN036A21+ CGGTCCAGCTATCGTGTCCATAGGAA
JMFN010A20+ CGGTCCAGCTATCGTGTCCATAGGAA---CTGCGGCCATGATTTCTTGGATGATAATTGA
rJMFF008N06- TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
                      ____________________________________________________________
consensus TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
 
. : . : . : . : . : . :
JMFF023J16+ GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTG
JMSF015O02+ GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTG
rJMFF023J16- GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTG
JMFN010A20+ GAAGGAAAGCAAAAGGCAGATTGAAAATGA
rJMFF008N06- GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTGGATTTGGTCGGTTCTCGACGA
                      ____________________________________________________________
consensus GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTGGATTTGGTCGGTTCTCGACGA