Contig 013613:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF005H21-                                                              AGAAAGAAG
JMSF035D09-                                                            GAAGAAAGAAG
                      ____________________________________________________________
consensus                                                              GAAGAAAGAAG
 
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JMFF005H21-           AGAAGGAAGATTCCCCACAGCCGTCAGCATCAGGAAATGGCCTCTTCCGCCGCCATAGAC
JMSF035D09-           AGAAGGAAGATTCCCCACAGCCGTCAGCATCAGGAAATGGCCTCTTCCGCCGCCATAGAC
                      ____________________________________________________________
consensus             AGAAGGAAGATTCCCCACAGCCGTCAGCATCAGGAAATGGCCTCTTCCGCCGCCATAGAC
 
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JMFF005H21-           GGCGTGGCATCTACGGCGCTGCGATCGGTTCTGCAGCGGGTGCAGCAGGCCGGCGAACGC
JMSF035D09-           GGCGTGGCATCTACGGCGCTGCGATCGGTTCTGCAGCGGGTGCAGCAGGCCGGCGAACGC
                      ____________________________________________________________
consensus             GGCGTGGCATCTACGGCGCTGCGATCGGTTCTGCAGCGGGTGCAGCAGGCCGGCGAACGC
 
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JMFF005H21-           TGCGGCTGCCAGTCCGACCGGATTCGGGTGGTCGCCGTGAGCAAGACCAAGCCAGCCTCC
JMSF035D09-           TGCGGCCGCCAGTCCGACCGGATTCGGGTGGTCGCCGTGAGCAAGACCAAGCCAGCCTCC
                      ____________________________________________________________
consensus             TGCGGCTGCCAGTCCGACCGGATTCGGGTGGTCGCCGTGAGCAAGACCAAGCCAGCCTCC
 
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JMFF005H21-           CTTATCCGCCAAGTTTACGACTCTGGCCACCGCTGTTTCGGCGAAAATTATGTCCAAGAG
JMSF035D09-           CTTATCCGCCAAGTTTACGACTCTGGCCACCGCTGTTTCGGCGAAAATTATGTCCAAGAG
                      ____________________________________________________________
consensus             CTTATCCGCCAAGTTTACGACTCTGGCCACCGCTGTTTCGGCGAAAATTATGTCCAAGAG
 
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JMFF005H21-           CTCGTCGACAAAGCTCCACAGCTTCCGGAGGATATAGAGTGGCATTTCATCGGCAATTTG
JMSF035D09-           CTCGTCGACAAAGCTCCACAGCTTCCGGAGGATATAGAGTGGCATTTCATCGGCAATTTG
rJMSF035D09+                      GCTCCACAGCTTCCGGAGGATATAGAGTGGCATTTCATCGGCAATTTG
rJMFF005H21+                                        GATATAGAGTGGCATTTCATCGGCAATTTG
                      ____________________________________________________________
consensus             CTCGTCGACAAAGCTCCACAGCTTCCGGAGGATATAGAGTGGCATTTCATCGGCAATTTG
 
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JMFF005H21-           CAGAGCAATAAAGTAAAGCCGCTTCTGACTGGTGTGCCAAATCTTGCAATGGTGGAGACT
JMSF035D09-           CAGAGCAATAAAGTAAAGCCGCTTCTGACTGGTGTGCCAAATCTTGCAATGGTGGAGACT
rJMSF035D09+          CAGAGCAATAAAGTAAAGCCGCTTCTGACTGGTGTGCCAAATCTTGCAATGGTGGAGACT
rJMFF005H21+          CAGAGCAATAAAGTAAAGCCGCTTCTGACTGGTGTGCCAAATCTTGCAATGGTGGAGACT
                      ____________________________________________________________
consensus             CAGAGCAATAAAGTAAAGCCGCTTCTGACTGGTGTGCCAAATCTTGCAATGGTGGAGACT
 
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JMFF005H21-           GTTGATGATGAGAAGATTGCAAATCAGCTTATTCGAGTGGTTGGAAACATTGGAAGGAAA
JMSF035D09-           GTTGATGATGAGAAGATTGCAAATCAGCTTAATCGAGTGGTTGGAAACATTGGAAGGAAA
rJMSF035D09+          GTTGATGATGAGAAGATTGCAAATCAGCTTAATCGAGTGGTTGGAAACATTGGAAGGAAA
rJMFF005H21+          GTTGATGATGAGAAGATTGCAAATCAGCTTATTCGAGTGGTTGGAAACATTGGAAGGAAA
                      ____________________________________________________________
consensus             GTTGATGATGAGAAGATTGCAAATCAGCTTATTCGAGTGGTTGGAAACATTGGAAGGAAA
 
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JMFF005H21-           CCATTGAAGGTTTTCGTTCAAGTGAATACAAGTGG                         
JMSF035D09-           CCATTGAAGGTTTTCGTTCAAGTGAATACAAGTGGAGAAGAAACTAAATCCGGTGTTGAG
rJMSF035D09+          CCATTGAAGGTTTTCGTTCAAGTGAATACAAGTGGAGAAGAAACTAAATCCGGTGTTGAG
rJMFF005H21+          CCATTGAAGGTTTTCGTTCAAGTGAATACAAGTGGAGAAGAAACTAAATCCGGTGTTGAG
                      ____________________________________________________________
consensus             CCATTGAAGGTTTTCGTTCAAGTGAATACAAGTGGAGAAGAAACTAAATCCGGTGTTGAG
 
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JMSF035D09-           CCAGCTGCGTGTGTGGACCTTGTCAAACACATTAGTTCAAGCTGCCCGAATCTTGAATTC
rJMSF035D09+          CCAGCTGCGTGTGTGGACCTTGTCAAACACATTAGTTCAAGCTGCCCGAATCTTGAATTC
rJMFF005H21+          CCAGCTGCGTGTGTGGACCTTGTCAAACACATTAGTTCAAGCTGCCCGAATCTTGAATTC
                      ____________________________________________________________
consensus             CCAGCTGCGTGTGTGGACCTTGTCAAACACATTAGTTCAAGCTGCCCGAATCTTGAATTC
 
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JMSF035D09-           AGTGGCCTGATGACAATAGGAATGCCTGACTATACTTCGACCCCTGAGAATTTTAAGACA
rJMSF035D09+          AGTGGCCTGATGACAATAGGAATGCCTGACTATACTTCGACCCCTGAGAATTTTAAGACA
rJMFF005H21+          AGTGGCCTGATGACAATAGGAATGCCTGACTATACTTCGACCCCTGAGAATTTTAAGACA
                      ____________________________________________________________
consensus             AGTGGCCTGATGACAATAGGAATGCCTGACTATACTTCGACCCCTGAGAATTTTAAGACA
 
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JMSF035D09-           TTAGCAAACTGTAGAAGTGAGGTATGCAAGGCACTTGG                      
rJMSF035D09+          TTAGCAAACTGTAGAAGTGAGGTATGCAAGGCACTTGGAATAGCTGAAGAGCAGTGTGAG
rJMFF005H21+          TTAGCAAACTGTAGAAGTGAGGTATGCAAGGCACTTGGAATAGCTGAAGAGCAGTGTGAG
                      ____________________________________________________________
consensus             TTAGCAAACTGTAGAAGTGAGGTATGCAAGGCACTTGGAATAGCTGAAGAGCAGTGTGAG
 
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rJMSF035D09+          CTGTCAATGGGCATGTCCGGTGACTTTGAACTTGCAATTGAAATGGGCAGTACAAATGTC
rJMFF005H21+          CTGTCAATGGGCATGTCCGGTGACTTTGAACTTGCAATTGAAATGGGCAGTACAAATGTC
                      ____________________________________________________________
consensus             CTGTCAATGGGCATGTCCGGTGACTTTGAACTTGCAATTGAAATGGGCAGTACAAATGTC
 
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rJMSF035D09+          AGAGTTGGATCTACAATATTTGGAGCTAGGGAGTATCCAAAGAAGCAATGAAACTAGCTA
rJMFF005H21+          AGAGTTGGATCTACAATATTTGGAGCTAGGGAGTATCCAAAGAAGCAATGAAACTAGCTA
                      ____________________________________________________________
consensus             AGAGTTGGATCTACAATATTTGGAGCTAGGGAGTATCCAAAGAAGCAATGAAACTAGCTA
 
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rJMSF035D09+          CTACCAGACACTCGATGACTCGAAGAACCAAATTCATCGCCAATAATGAAAATTCACTAT
rJMFF005H21+          CTACCAGACACTCGATGACTCGAAGAACCAAATTCATCGCCAATAATGAAAATTCACTAT
                      ____________________________________________________________
consensus             CTACCAGACACTCGATGACTCGAAGAACCAAATTCATCGCCAATAATGAAAATTCACTAT
 
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rJMSF035D09+          TCGACAGAGCTTTCTTGACAGGAGGATTCATAGATAATGAAAATTTCCTTAGCTTCTTTG
rJMFF005H21+          TCGACAGAGCTTTCTTGACAGGAGGATTCATAGATAATGAAAATTTCCTTAGCTTCTTTG
                      ____________________________________________________________
consensus             TCGACAGAGCTTTCTTGACAGGAGGATTCATAGATAATGAAAATTTCCTTAGCTTCTTTG
 
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rJMSF035D09+          CTGCACCTAAGAACTGATTGAGACCTCCATTTATGTAATGGTTTACCTTCACCTATAGCT
rJMFF005H21+          CTGCACCTAAGAACTGATTGAGGCCTCCATTTATGTAATGGTTTACCTTCACCTATAGCT
                      ____________________________________________________________
consensus             CTGCACCTAAGAACTGATTGAGGCCTCCATTTATGTAATGGTTTACCTTCACCTATAGCT
 
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rJMSF035D09+          CTCTGGCCAAGCCCGAGTCTATAACTATAGCTGGAATGA                     
rJMFF005H21+          CTCTGGCCAAGCCCGAGTCTATAACTATAGCTGGAATGATGATATTAACTTTTTAATCAT
                      ____________________________________________________________
consensus             CTCTGGCCAAGCCCGAGTCTATAACTATAGCTGGAATGATGATATTAACTTTTTAATCAT