Contig 013612:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005G11Sequence505013612 (8)gb|KDO78982.1|2e-56hypothetical protein CISIN_1g014406mg [Citrus sinensis]724013612 (8)ref|XP_009594459.1|5e-134PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb
JMFF032P09Sequence630013612 (8)gb|KDO78982.1|7e-72hypothetical protein CISIN_1g014406mg [Citrus sinensis]786013612 (8)ref|XP_009594459.1|2e-149PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb
JMFS075B05Sequence482013612 (8)ref|XP_009594459.1|6e-61PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb
JMSF029B17Sequence654013612 (8)emb|CDP02578.1|1e-78unnamed protein product [Coffea canephora]707013612 (8)gb|AAK54616.1|AF374474_14e-133CK2 alpha subunit [Nicotiana tabacum]
JMSF039E05Sequence695016841gb|KDO78982.1|2e-71hypothetical protein CISIN_1g014406mg [Citrus sinensis]879013612 (8)ref|XP_009594459.1|0.0PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF032P09- GATCCATTTCTACTGTCACTCTCTTCCCAAAACGAACACAAATTCGATCCGCTCA
JMSF029B17- GGAGATCCATTTCTACTGTCACTCTCTTCCCAAAACGAACACAAATTCGATCCGCTCA
                      ____________________________________________________________
consensus GGAGATCCATTTCTACTGTCACTCTCTTCCCAAAACGAACACAAATTCGATCCGCTCA
 
. : . : . : . : . : . :
JMFF005G11- CTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
JMFF032P09- CCTTCTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
JMSF029B17- CCTTCTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
                      ____________________________________________________________
consensus CCTTCTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
 
. : . : . : . : . : . :
JMFF005G11- GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
JMFF032P09- GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
JMSF029B17- GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
                      ____________________________________________________________
consensus GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
 
. : . : . : . : . : . :
JMFF005G11- TTCTTTTGCTTCTCCGGGACGGGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
JMFF032P09- TTCTTTTGCTTCTCCGGGACGGGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
JMSF029B17- TTCTTTTGCTTCTCCGGGACGAGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
                      ____________________________________________________________
consensus TTCTTTTGCTTCTCCGGGACGGGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
 
. : . : . : . : . : . :
JMFF005G11- TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
JMFF032P09- TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
JMSF029B17- TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
                      ____________________________________________________________
consensus TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
 
. : . : . : . : . : . :
JMFF005G11- TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
JMFF032P09- TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
JMSF029B17- TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
                      ____________________________________________________________
consensus TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
 
. : . : . : . : . : . :
JMFF005G11- GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
JMFF032P09- GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
JMSF029B17- GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
                      ____________________________________________________________
consensus GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
 
. : . : . : . : . : . :
JMFF005G11- AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
JMFF032P09- AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
JMSF029B17- AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
rJMSF039E05+ TGGAG
                      ____________________________________________________________
consensus AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
 
. : . : . : . : . : . :
JMFF005G11- GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
JMFF032P09- GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
JMSF029B17- GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
rJMSF039E05+ GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
                      ____________________________________________________________
consensus GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
 
. : . : . : . : . : . :
JMFF005G11- TGATATTTGAGTATGTAAACAGTACAGAT
JMFF032P09- TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
JMSF029B17- TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
rJMSF039E05+ TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
rJMFF032P09+ GATT
                      ____________________________________________________________
consensus TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
 
. : . : . : . : . : . :
JMFF032P09- ATGACATACGGTACTACATATATGAGCTTCTCA
JMSF029B17- ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCCTAGACTATTGTCATTCA
rJMSF039E05+ ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCCTAGACTATTGTCATTCACAAG
rJMSF029B17+ CAAG
rJMFF032P09+ ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCNTAGACTATTGTCATTCACAAG
rJMFF005G11+ CAAG
                      ____________________________________________________________
consensus ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCCTAGACTATTGTCATTCACAAG
 
. : . : . : . : . : . :
rJMSF039E05+ GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
rJMSF029B17+ GAATAATGCATAGAGATGTCAANCCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
rJMFF032P09+ GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
rJMFF005G11+ GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
                      ____________________________________________________________
consensus GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
 
. : . : . : . : . : . :
rJMSF039E05+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
rJMSF029B17+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
rJMFF032P09+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
rJMFF005G11+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
                      ____________________________________________________________
consensus TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
 
. : . : . : . : . : . :
rJMSF039E05+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
rJMSF029B17+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
rJMFF032P09+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
rJMFF005G11+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
                      ____________________________________________________________
consensus GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
 
. : . : . : . : . : . :
rJMSF039E05+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
rJMSF029B17+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
rJMFF032P09+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
rJMFF005G11+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
                      ____________________________________________________________
consensus ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
 
. : . : . : . : . : . :
rJMSF039E05+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
JMFS075B05- TCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
rJMSF029B17+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
rJMFF032P09+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
rJMFF005G11+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
                      ____________________________________________________________
consensus CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
 
. : . : . : . : . : . :
rJMSF039E05+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
JMFS075B05- CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
rJMSF029B17+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
rJMFF032P09+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
rJMFF005G11+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
                      ____________________________________________________________
consensus CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
 
. : . : . : . : . : . :
rJMSF039E05+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
JMFS075B05- CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
rJMSF029B17+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
rJMFF032P09+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
rJMFF005G11+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
                      ____________________________________________________________
consensus CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
 
. : . : . : . : . : . :
rJMSF039E05+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
JMFS075B05- ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
rJMSF029B17+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
rJMFF032P09+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
rJMFF005G11+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
                      ____________________________________________________________
consensus ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
 
. : . : . : . : . : . :
rJMSF039E05+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
JMFS075B05- ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGC
rJMSF029B17+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
rJMFF032P09+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
rJMFF005G11+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
                      ____________________________________________________________
consensus ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
 
. : . : . : . : . : . :
rJMSF039E05+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
rJMSF029B17+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
rJMFF032P09+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
rJMFF005G11+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
                      ____________________________________________________________
consensus AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
 
. : . : . : . : . : . :
rJMSF039E05+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
rJMSF029B17+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
rJMFF032P09+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
rJMFF005G11+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
                      ____________________________________________________________
consensus AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
 
. : . : . : . : . : . :
rJMSF039E05+ ATGTACTATTGGAGAGGTATATTTTAGAC
rJMSF029B17+ ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCA
rJMFF032P09+ ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCATGTT
rJMFF005G11+ ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCATGTTTGAACTCAATAAATT
                      ____________________________________________________________
consensus ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCATGTTTGAACTCAATAAATT