Contig 013610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004N12Sequence615013610 (3)ref|XP_010326730.1|2e-91PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Solan780013610 (3)ref|XP_010326730.1|1e-18PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Solan
JMFS035D08Sequence593013610 (3)ref|XP_010326730.1|1e-19PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Solan

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF004N12- GGAATCGGTGGTGAGTTTGGTCATCATGGCGC
                      ____________________________________________________________
consensus GGAATCGGTGGTGAGTTTGGTCATCATGGCGC
 
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JMFF004N12- CCCAGGCGGTGTTCATGCCGACAGAAGTTACCAAGAATCTGCCATGTCCGGCAGCCACTT
                      ____________________________________________________________
consensus CCCAGGCGGTGTTCATGCCGACAGAAGTTACCAAGAATCTGCCATGTCCGGCAGCCACTT
 
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JMFF004N12- TCGTCCCGGACATGAGGAACGGATTCCGATAATGATTGATCCCTACGTGATCACTCTTGC
                      ____________________________________________________________
consensus TCGTCCCGGACATGAGGAACGGATTCCGATAATGATTGATCCCTACGTGATCACTCTTGC
 
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JMFF004N12- CGGTCAGGCTCGATTCATCGACCTTCAATGAGTGCCCTTCCACCAACAATCCATCCGCCG
                      ____________________________________________________________
consensus CGGTCAGGCTCGATTCATCGACCTTCAATGAGTGCCCTTCCACCAACAATCCATCCGCCG
 
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JMFF004N12- GGACTTGATCTCCGATCTTCAAGCAGACAATATCTCCGACAACGATCTCGAAGACGGAAA
                      ____________________________________________________________
consensus GGACTTGATCTCCGATCTTCAAGCAGACAATATCTCCGACAACGATCTCGAAGACGGAAA
 
. : . : . : . : . : . :
JMFF004N12- CCTGCCGCCGTCTCCCGGCCCTGACAACCTCAACCGGAATGTTCTTGCTAATCTTCAACA
                      ____________________________________________________________
consensus CCTGCCGCCGTCTCCCGGCCCTGACAACCTCAACCGGAATGTTCTTGCTAATCTTCAACA
 
. : . : . : . : . : . :
JMFF004N12- GCTTATCGAACAGTCTGCTCCGCCGGAAATTGATGAGAGCGGAAAAGAAGATTACCCGAA
                      ____________________________________________________________
consensus GCTTATCGAACAGTCTGCTCCGCCGGAAATTGATGAGAGCGGAAAAGAAGATTACCCGAA
 
. : . : . : . : . : . :
JMFF004N12- AGAAGTTGACAAACATACTCCCTCTATCCCACCATCCTTCCTTGATTCCATCCTTTTTGA
                      ____________________________________________________________
consensus AGAAGTTGACAAACATACTCCCTCTATCCCACCATCCTTCCTTGATTCCATCCTTTTTGA
 
. : . : . : . : . : . :
JMFF004N12- TCCCAAACGCTCGCTCTAAAACAGCACAAGCGAAGGCGATCACAAACGCCTCCCAGACAA
rJMFF004N12+ A
                      ____________________________________________________________
consensus TCCCAAACGCTCGCTCTAAAACAGCACAAGCGAAGGCGATCACAAACGCCTCCCAGACAA
 
. : . : . : . : . : . :
JMFF004N12- TATGGACGAGATTTTTGGCCGGCGGCTTACTGTAAGTGTTGCTTCCAAATGCTTGGTTTC
JMFS035D08+ GCCGGCGGCTTACTGTAAGTGTTGCTTCCAAATGCTTGGTTTC
rJMFF004N12+ TATGGACGAGATTTTTGGCCGGCGGCTTACTGTAAGTGTTGCTTCCAAATGCTTGGTTTC
                      ____________________________________________________________
consensus TATGGACGAGATTTTTGGCCGGCGGCTTACTGTAAGTGTTGCTTCCAAATGCTTGGTTTC
 
. : . : . : . : . : . :
JMFF004N12- TACGCGAAATATCCTGGTCGTCGCCATAGATTCCGTCGT
JMFS035D08+ TACGCGAAATATCCTGGTCGTCGCCATAGATTCCGTCGTCCAAATTAGTGTCCAGAGAAG
rJMFF004N12+ TACGCGAAATATCCTGGTCGTCGCCATAGATTCCGTCGTGCAAATTAGTGTCCAGAGAAG
                      ____________________________________________________________
consensus TACGCGAAATATCCTGGTCGTCGCCATAGATTCCGTCGTGCAAATTAGTGTCCAGAGAAG
 
. : . : . : . : . : . :
JMFS035D08+ AAGAAAGGCCTCCAATTCCACCAAGATTAGCAAGATGCTCGAGGCTTTTCTCCTTGACAA
rJMFF004N12+ AAGAAAGGCCTCCAATTCCACCAAGATTAGCAAGATGCTTGAGCTTTTTCTCCTTGACAA
                      ____________________________________________________________
consensus AAGAAAGGCCTCCAATTCCACCAAGATTAGCAAGATGCTTGAGGTTTTTCTCCTTGACAA
 
. : . : . : . : . : . :
JMFS035D08+ TCTTTGCAAGGCTTGACTGATCAAGATCCTGGAAACAACGAGGGTGTTCT---------T
rJMFF004N12+ TCTTTGCAAGGCTTGACTGATCAAGATTCTGGAAACAACGAGGGTGTTCTTCATCATCAT
                      ____________________________________________________________
consensus TCTTTGCAAGGCTTGACTGATCAAGATTCTGGAAACAACGAGGGTGTTCTTCATCATCAT
 
. : . : . : . : . : . :
JMFS035D08+ CATCATCATCCACGTCAATGGAAAATCTGTCAGATTGTTCAGGAGACACTTTCCTGGAGG
rJMFF004N12+ CATCATCATCCACGTCAATGGATAATCTGTCAGATTGTTCAGGAGACACTTTCCTGTCGG
                      ____________________________________________________________
consensus CATCATCATCCACGTCAATGGATAATCTGTCAGATTGTTCAGGAGACACTTTCCTGTCGG
 
. : . : . : . : . : . :
JMFS035D08+ GATTCTTGAGAAGATATCTGTAAGATGGAGCTTGGAAGAAGAGCTTGGCACTGTGATTTT
rJMFF004N12+ GATTCTTGAGAAGATATCTGTAAGATAATGGAGCTTCGAGGAGCTTGGCACTGTGATTTT
                      ____________________________________________________________
consensus GATTCTTGAGAAGATATCTGTAAGATGGTGGTTGTTCGAGGAGCTTGGCACTGTGATTTT
 
. : . : . : . : . : . :
JMFS035D08+ GTTTAGAATAATGGCGGAATGCATTCAAACATTTGATCATAGAAAGTGCAAGACGCCATC
rJMFF004N12+ GTTTAGAATACTGGCGGAATGCATTCAAACATTTGATCATAGAAAGGGCAAGACGCCATC
                      ____________________________________________________________
consensus GTTTAGAATACTGGCGGAATGCATTCAAACATTTGATCATAGAAAGTGCAAGACGCCATC
 
. : . : . : . : . : . :
JMFS035D08+ TTTTCTTGCTTGATAACCTCAGTTCCGTTTTCAGTGGCAGGTCGATGACAACAATGTCCA
rJMFF004N12+ TTTTCTTGCTTGATAACCTCAGTTCCGTTTCCAGTGGCAGGTCGATGACAACAATGTCCA
                      ____________________________________________________________
consensus TTTTCTTGCTTGATAACCTCAGTTCCGTTTTCAGTGGCAGGTCGATGACAACAATGTCCA
 
. : . : . : . : . : . :
JMFS035D08+ TGCTGCGAAAAATGGCTTGCAGATTTCTCTCGTGAAGCTGTAAAAGAAGAAAAGGATGAA
rJMFF004N12+ TGCTGGCCAAAATGGCTAACAGATTTCTCTCGTGAAGCAGTAAATGAAG-AAAGGATGAA
                      ____________________________________________________________
consensus TGCTGGGCAAAATGGCTTGCAGATTTCTCTCGTGAAGCTGTAAATGAAGAAAAGGATGAA
 
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JMFS035D08+ AGGTATGTTTGTAATTGCTATATATCAATCTTGAACGACAAGCT
rJMFF004N12+ AGGTATGTTTGTAATTGCTATATATCAATCTTGAACCACAAGCTGTCCACTAGTACTGTA
                      ____________________________________________________________
consensus AGGTATGTTTGTAATTGCTATATATCAATCTTGAACGACAAGCTGTCCACTAGTACTGTA
 
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rJMFF004N12+ CTCTAAGTGTTGAGAATTGGTGACTGGGTTTCGATTCGTAACATGATGAGTTCCCGACAT
                      ____________________________________________________________
consensus CTCTAAGTGTTGAGAATTGGTGACTGGGTTTCGATTCGTAACATGATGAGTTCCCGACAT
 
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rJMFF004N12+ GAATTTATATAGGTACATACTAAAGAATCTGTTCACGAACCGCGTCTAAGAGAGACGGTG
                      ____________________________________________________________
consensus GAATTTATATAGGTACATACTAAAGAATCTGTTCACGAACCGCGTCTAAGAGAGACGGTG
 
. : . : . : . : . : . :
rJMFF004N12+ TTCATATTTACTTTTTAAATGAGTGGGATGTGCGTTGGCGTCAATTCAGATGGAGCACAA
                      ____________________________________________________________
consensus TTCATATTTACTTTTTAAATGAGTGGGATGTGCGTTGGCGTCAATTCAGATGGAGCACAA