Contig 013597:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C15Sequence326013597 (7)ref|XP_011089412.1|7e-44PREDICTED: 60S ribosomal protein L35-like [Sesamum indicum]673013597 (7)ref|XP_007206099.1|3e-72hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti
JMFF024E05Sequence483013597 (7)ref|XP_007206099.1|2e-73hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti626013597 (7)ref|XP_007206099.1|1e-72hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti
JMFN003H21Sequence538013597 (7)ref|XP_007206099.1|7e-73hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti
JMSF023H10Sequence606013597 (7)ref|XP_007206099.1|1e-72hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti541013597 (7)ref|XP_007206099.1|5e-73hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF024E05- ACT
rJMFF003C15- ACTACTTGGAACT
                      ____________________________________________________________
consensus ACTACTTGGAACT
 
. : . : . : . : . : . :
rJMFF024E05- TGGCAATTGTAGCCTTGCAAAGTGTTACAGAATTGATGGCAATCTATCATACAAGATTAC
JMSF023H10+ TCATACAAGATTAC
rJMFF003C15- TGGCAATTGCAGCCTTGCAAAGTGTTACAGAATTGATGGCAATCTATCATACAAGATTAC
                      ____________________________________________________________
consensus TGGCAATTGTAGCCTTGCAAAGTGTTACAGAATTGATGGCAATCTATCATACAAGATTAC
 
. : . : . : . : . : . :
JMFN003H21+ GAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
rJMFF024E05- TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
JMSF023H10+ TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
rJMSF023H10- TATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
rJMFF003C15- TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
                      ____________________________________________________________
consensus TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
 
. : . : . : . : . : . :
JMFF003C15+ AACACAGTAAACAAAATTCTNGAATTCAATGTTCTAACTGATATACTC
JMFN003H21+ CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
JMFF024E05+ AAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
rJMFF024E05- CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
JMSF023H10+ CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
rJMSF023H10- CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
rJMFF003C15- CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
                      ____________________________________________________________
consensus CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
 
. : . : . : . : . : . :
JMFF003C15+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
JMFN003H21+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
JMFF024E05+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
rJMFF024E05- AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
JMSF023H10+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
rJMSF023H10- AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
rJMFF003C15- AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
                      ____________________________________________________________
consensus AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
 
. : . : . : . : . : . :
JMFF003C15+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
JMFN003H21+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
JMFF024E05+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
rJMFF024E05- GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
JMSF023H10+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
rJMSF023H10- GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
rJMFF003C15- GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
                      ____________________________________________________________
consensus GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
 
. : . : . : . : . : . :
JMFF003C15+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
JMFN003H21+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
JMFF024E05+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
rJMFF024E05- ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
JMSF023H10+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
rJMSF023H10- ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
rJMFF003C15- ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
                      ____________________________________________________________
consensus ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
 
. : . : . : . : . : . :
JMFF003C15+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
JMFN003H21+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
JMFF024E05+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
rJMFF024E05- CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
JMSF023H10+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
rJMSF023H10- CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
rJMFF003C15- CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
                      ____________________________________________________________
consensus CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
 
. : . : . : . : . : . :
JMFF003C15+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTAT
JMFN003H21+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
JMFF024E05+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
rJMFF024E05- AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
JMSF023H10+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
rJMSF023H10- AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
rJMFF003C15- AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
                      ____________________________________________________________
consensus AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
 
. : . : . : . : . : . :
JMFN003H21+ GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
JMFF024E05+ GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
rJMFF024E05- GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
JMSF023H10+ GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
rJMSF023H10- GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
rJMFF003C15- GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
                      ____________________________________________________________
consensus GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
 
. : . : . : . : . : . :
JMFN003H21+ TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
JMFF024E05+ TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
rJMFF024E05- TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
JMSF023H10+ TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
rJMSF023H10- TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
rJMFF003C15- TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
                      ____________________________________________________________
consensus TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
 
. : . : . : . : . : . :
JMFN003H21+ ATTCCGAAAA
JMFF024E05+ ATTCCGAAAACCCT
rJMFF024E05- ATTCCGAAAACCCT
JMSF023H10+ ATTCCGAAAACCCT
rJMSF023H10- ATTCCGAAAACCCT
rJMFF003C15- ATTCCGAAAACCCTAGCCTTGAATCGGTTCTCCGAGTATCGCTGTTCCAGACAGCGATGA
                      ____________________________________________________________
consensus ATTCCGAAAACCCTAGCCTTGAATCGGTTCTCCGAGTATCGCTGTTCCAGACAGCGATGA