Contig 013591:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001G02Sequence530015211gb|KDO41054.1|5e-56hypothetical protein CISIN_1g002238mg [Citrus sinensis]655013591 (7)emb|CBI28627.3|3e-84unnamed protein product [Vitis vinifera]
JMFF001O23Sequence540011917 (6)emb|CDP01661.1|5e-47unnamed protein product [Coffea canephora]721013591 (7)emb|CBI28627.3|6e-111unnamed protein product [Vitis vinifera]
JMFS043A06Sequence598013591 (7)emb|CBI28627.3|5e-70unnamed protein product [Vitis vinifera]
JMFS149C12Sequence504013591 (7)ref|XP_011038249.1|1e-109PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica]
JMSF008J09Sequence373011917 (6)emb|CDP01661.1|5e-16unnamed protein product [Coffea canephora]695013591 (7)emb|CBI28627.3|2e-110unnamed protein product [Vitis vinifera]
JMSF040G10Sequence776013591 (7)emb|CBI28627.3|1e-106unnamed protein product [Vitis vinifera]
JMSF053K09Sequence648011917 (6)ref|XP_009587166.1|6e-56PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]928013591 (7)emb|CAN77178.1|8e-162hypothetical protein VITISV_021790 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS149C12- CAAAGGTTAGGCACCGGCACCTTGTTGCCCTAC
                      ____________________________________________________________
consensus CAAAGGTTAGGCACCGGCACCTTGTTGCCCTAC
 
. : . : . : . : . : . :
JMFS149C12- TCGGGTACTGTCTCGATGGGAACGAGAAACTTCTTGTGTATGAGTACATGCCTCAAGGGA
                      ____________________________________________________________
consensus TCGGGTACTGTCTCGATGGGAACGAGAAACTTCTTGTGTATGAGTACATGCCTCAAGGGA
 
. : . : . : . : . : . :
JMFS149C12- CTTTAAGTAGGCATCTTTTCAACTGGGCAGAAGAAGGGCTGAAGCCTCTGGAATGGACG-
rJMSF053K09+ GGGCTGAAGCCTCTGGAATGGACGA
                      ____________________________________________________________
consensus CTTTAAGTAGGCATCTTTTCAACTGGGCAGAAGAAGGGCTGAAGCCTCTGGAATGGACGA
 
. : . : . : . : . : . :
JMFS149C12- AAAAGGTTGACAATCGCATTATATGTTGCTAGAGGAGTGGAGTATCTCCATACTTTAGCA
rJMSF053K09+ AAAAGGTTGACAATCGCATTAGATGTTGCTAGAGGAGTGGAGTATCTCCATACTTTAGCA
                      ____________________________________________________________
consensus AAAAGGTTGACAATCGCATTATATGTTGCTAGAGGAGTGGAGTATCTCCATACTTTAGCA
 
. : . : . : . : . : . :
JMFS149C12- CACCAAAGTTTCATCCATAGGGACCTTAAGCCTTCGAACATTCTTCTAGGGGACGATATG
rJMSF053K09+ CACCAAAGTTTCATCCATAGGGACCTTAAGCCTTCGAACATTCTTCTAGGGGACGATATG
                      ____________________________________________________________
consensus CACCAAAGTTTCATCCATAGGGACCTTAAGCCTTCGAACATTCTTCTAGGGGACGATATG
 
. : . : . : . : . : . :
JMFS149C12- AGGGCTAAGGTGGCAGATTTTGGCCTCGTTAGACTTGCTCCTGAAGGGAAAGGCTCCATC
rJMSF053K09+ AGGGCTAAGGTGGCAGATTTTGGCCTCGTTAGACTTGCTCCTGAAGGGAAAGGCTCCATC
                      ____________________________________________________________
consensus AGGGCTAAGGTGGCAGATTTTGGCCTCGTTAGACTTGCTCCTGAAGGGAAAGGCTCCATC
 
. : . : . : . : . : . :
JMFS149C12- GAGACCAGGATTGCTGGAACTTTCGGATATCTGGCTCCAGAGTATGCAGTAACTGGGAGG
rJMSF053K09+ GAGACCAGGATTGCTGGAACTTTCGGATATCTGGCTCCAGAGTATGCAGTAACTGGGAGG
rJMSF008J09+ TCCAGAGTATGCAGTAACTGGGAGG
rJMSF040G10+ CAGTAACTGGGAGG
rJMFF001O23+ TCCAGAGTATGCAGTAACTGGGAGG
                      ____________________________________________________________
consensus GAGACCAGGATTGCTGGAACTTTCGGATATCTGGCTCCAGAGTATGCAGTAACTGGGAGG
 
. : . : . : . : . : . :
JMFS149C12- GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMSF053K09+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMSF008J09+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMSF040G10+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMFF001O23+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMFF001G02+ GGG
                      ____________________________________________________________
consensus GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
 
. : . : . : . : . : . :
JMFS149C12- AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGT
rJMSF053K09+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
rJMSF008J09+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
rJMSF040G10+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
JMFS043A06- CGGAAGGTGTCCTTGTTTAG
rJMFF001O23+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
rJMFF001G02+ AGGAAGGCTCTGGACGAGAGGCAACCCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
                      ____________________________________________________________
consensus AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
 
. : . : . : . : . : . :
rJMSF053K09+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMSF008J09+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMSF040G10+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
JMFS043A06- GTGCATTCTCCTGAACCACGTCACGAGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMFF001O23+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMFF001G02+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
                      ____________________________________________________________
consensus GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
 
. : . : . : . : . : . :
rJMSF053K09+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMSF008J09+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMSF040G10+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
JMFS043A06- GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMFF001O23+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMFF001G02+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
                      ____________________________________________________________
consensus GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
 
. : . : . : . : . : . :
rJMSF053K09+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMSF008J09+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMSF040G10+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
JMFS043A06- TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMFF001O23+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMFF001G02+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
                      ____________________________________________________________
consensus TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
 
. : . : . : . : . : . :
rJMSF053K09+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMSF008J09+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMSF040G10+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
JMFS043A06- TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMFF001O23+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMFF001G02+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
                      ____________________________________________________________
consensus TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
 
. : . : . : . : . : . :
rJMSF053K09+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMSF008J09+ GACATGTCCTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMSF040G10+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
JMFS043A06- GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMFF001O23+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMFF001G02+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
                      ____________________________________________________________
consensus GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
 
. : . : . : . : . : . :
rJMSF053K09+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMSF008J09+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMSF040G10+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
JMFS043A06- GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMFF001O23+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMFF001G02+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
                      ____________________________________________________________
consensus GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
 
. : . : . : . : . : . :
rJMSF053K09+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMSF008J09+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMSF040G10+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
JMFS043A06- CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMFF001O23+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMFF001G02+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
                      ____________________________________________________________
consensus CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
 
. : . : . : . : . : . :
rJMSF053K09+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMSF008J09+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMSF040G10+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
JMFS043A06- CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMFF001O23+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMFF001G02+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
                      ____________________________________________________________
consensus CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
 
. : . : . : . : . : . :
rJMSF053K09+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCT
rJMSF008J09+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
rJMSF040G10+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCNGTCTTGAA
JMFS043A06- TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
rJMFF001O23+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
rJMFF001G02+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
                      ____________________________________________________________
consensus TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
 
. : . : . : . : . : . :
rJMSF008J09+ GTTC
rJMSF040G10+ GTT
JMFS043A06- GTTCAGTGAGCCTTGTAATGTAA
rJMFF001O23+ GTTCAGTGAGCCTTGTAATGTAA
rJMFF001G02+ GTTCAGTGAGCCTTGTAATGTAATGTTTCTTAAGAGTTAAGAATGGCCACTCAATATGCT
                      ____________________________________________________________
consensus GTTCAGTGAGCCTTGTAATGTAATGTTTCTTAAGAGTTAAGAATGGCCACTCAATATGCT