Contig 013589:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B12Sequence542013589 (8)gb|KDO87500.1|1e-48hypothetical protein CISIN_1g027319mg [Citrus sinensis]744013589 (8)ref|XP_002320387.2|2e-71hypothetical protein POPTR_0014s13350g [Populus trichocarpa] gb|EEE98702.2| hypo
JMFF015B20Sequence590013589 (8)ref|XP_010242542.1|189PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera]604013589 (8)ref|XP_009764088.1|206PREDICTED: uncharacterized protein LOC104215861 [Nicotiana sylvestris]
JMSF003G08Sequence427013589 (8)ref|XP_010242542.1|76.3PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera]728013589 (8)ref|XP_002273337.1|241PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] emb|CBI32315.3|
JMSF045L06Sequence612013589 (8)ref|XP_010242542.1|207PREDICTED: uncharacterized protein LOC104586868 [Nelumbo nucifera]803013589 (8)ref|XP_002273337.1|263PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] emb|CBI32315.3|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015B20- GAAGAATGCAATGAAATTGCTA
JMFF001B12- GCTA
JMSF003G08- GCTA
JMSF045L06- GAAGAATGCAATGAAATTGCTA
                      ____________________________________________________________
consensus GAAGAATGCAATGAAATTGCTA
 
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JMFF015B20- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
JMFF001B12- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
JMSF003G08- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
JMSF045L06- ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
                      ____________________________________________________________
consensus ACGGCTGCGACGCCATTACAATGCATGAGAGCTGAGTAGATATCTATTAGACGCCATGAA
 
. : . : . : . : . : . :
JMFF015B20- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
JMFF001B12- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
JMSF003G08- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
JMSF045L06- CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
                      ____________________________________________________________
consensus CGCCCTAATGTCTGCTGCATCTCCTTTTACCTCTATTTCCATCTTGAAGTTTCCTTCATC
 
. : . : . : . : . : . :
JMFF015B20- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
JMFF001B12- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
JMSF003G08- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
JMSF045L06- CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
rJMSF045L06+ GAAAAGCTCGAGATT
                      ____________________________________________________________
consensus CCCTCTGGTTCTCAGAAATGGCGTCTTTAGGGCCCAATTTTGGGGGAAAAGCTCGAGATT
 
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JMFF015B20- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
JMFF001B12- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
JMSF003G08- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
JMSF045L06- TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
rJMSF045L06+ TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
                      ____________________________________________________________
consensus TCGAGCAAGCTCGAACGGATTGGATAAGAAGGTGGAGGAGGAAGGTTTAGGAGACTCTGC
 
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JMFF015B20- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGGGC
JMFF001B12- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
JMSF003G08- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
JMSF045L06- AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
rJMSF045L06+ AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
                      ____________________________________________________________
consensus AGAAACCAAAGTTGAAGATGAACAAGAAAGTAAAGGGGCAAACAGCATTTCTAATGGAGC
 
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JMFF015B20- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
JMFF001B12- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
JMSF003G08- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
JMSF045L06- AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
rJMSF045L06+ AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
rJMSF003G08+ ATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
rJMFF001B12+ ACTGAAAAAGGTGGTTCAGANGAC
                      ____________________________________________________________
consensus AGCATCCACTACTATCAACCCGGCACTCGATAAAGAACTGAAAAAGGTGGTTCAGAAGAC
 
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JMFF015B20- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
JMFF001B12- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
JMSF003G08- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAA
JMSF045L06- TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMSF045L06+ TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMFF015B20+ GGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMSF003G08+ TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
rJMFF001B12+ TGCTGCANCTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
                      ____________________________________________________________
consensus TGCTGCAACTTTCGCACCGAGGGCTTCCACTGCTTCAAAAAATCCTGCTGTACCTGGAAC
 
. : . : . : . : . : . :
JMFF015B20- TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCANTGTTGCTGGGAGGGGCTCT
JMFF001B12- TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
JMSF045L06- TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMSF045L06+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMFF015B20+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMSF003G08+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
rJMFF001B12+ TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
                      ____________________________________________________________
consensus TACATTATATACCGTCTTTGAAGTCCAGGGCTACGTTTCAATGTTGCTGGGAGGGGCTCT
 
. : . : . : . : . : . :
JMFF015B20- CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
JMFF001B12- CTCTTTCAATCTCATATTTCCGTCTAATGAACCANACATCTGGAGACTGATGGGAATG
JMSF045L06- CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMSF045L06+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMFF015B20+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMSF003G08+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
rJMFF001B12+ CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
                      ____________________________________________________________
consensus CTCTTTCAATCTCATATTTCCGTCTAATGAACCAGACATCTGGAGACTGATGGGAATGTG
 
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JMFF015B20- GTCCATCTGGATGTTCACTATTCCATCC
JMSF045L06- GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAA
rJMSF045L06+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
rJMFF015B20+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
rJMSF003G08+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
rJMFF001B12+ GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
                      ____________________________________________________________
consensus GTCCATCTGGATGTTCACTATTCCATCCCTTCGGGCCCGAGACTGCTCAAAGAATGAGAA
 
. : . : . : . : . : . :
rJMSF045L06+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
rJMFF015B20+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
rJMSF003G08+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
rJMFF001B12+ AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
                      ____________________________________________________________
consensus AGAAGCACTCAATTATCTCTTTCTTCTTGTCCCACTGCTGAACATTATAGTCCCATTCTT
 
. : . : . : . : . : . :
rJMSF045L06+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
rJMFF015B20+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
rJMSF003G08+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
rJMFF001B12+ CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
                      ____________________________________________________________
consensus CTGGAAATCCTTCGCTGTTGTTTGGTCAGTGGATATTGTGGCATTTTTTGGAATGTATGC
 
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rJMSF045L06+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
rJMFF015B20+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
rJMSF003G08+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
rJMFF001B12+ ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
                      ____________________________________________________________
consensus ATGGAAGCTTGGATGGCTACAGAAAGAGTAAAGGTCCAGGGAAGAGAAGCAGCTTCTTTG
 
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rJMSF045L06+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
rJMFF015B20+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
rJMSF003G08+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
rJMFF001B12+ TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
                      ____________________________________________________________
consensus TTTATGTTAAATGATTATTGGTTGGACCTGAAATCAACTTCCAGAGCTCATTTTTGGCCA
 
. : . : . : . : . : . :
rJMSF045L06+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGT
rJMFF015B20+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGT
rJMSF003G08+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGT
rJMFF001B12+ GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGTCTGGTCATTCAGGGATG
                      ____________________________________________________________
consensus GGACTGAAGGATCTTGATGAAAGAACGCATCCTCAATCAGAGTCTGGTCATTCAGGGATG
 
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rJMFF001B12+ CATGGATGCTATGTACTTGTGTTTACTGTATTCGTGTCTTTTCTATAAAGTACATATACG
                      ____________________________________________________________
consensus CATGGATGCTATGTACTTGTGTTTACTGTATTCGTGTCTTTTCTATAAAGTACATATACG
 
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rJMFF001B12+ CTTTTCCTGTATAGACGGTTTAATTTGAAATCTCTCATGCTAGCCAACTTTTACAAAGTG
                      ____________________________________________________________
consensus CTTTTCCTGTATAGACGGTTTAATTTGAAATCTCTCATGCTAGCCAACTTTTACAAAGTG
 
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rJMFF001B12+ TTTAGTATACGGTTTAAAATCTAGCTAGATGACAGAACTAAAATTTATTGTTTCCCTTTT
                      ____________________________________________________________
consensus TTTAGTATACGGTTTAAAATCTAGCTAGATGACAGAACTAAAATTTATTGTTTCCCTTTT