Contig 013566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011B21Sequence324013566 (3)ref|XP_009624396.1|1e-29PREDICTED: uncharacterized protein LOC104115460 isoform X1 [Nicotiana tomentosi763001302 (3)ref|XP_009624399.1|2e-62PREDICTED: uncharacterized protein LOC104115460 isoform X3 [Nicotiana tomentosi
JMSF012A03Sequence277013566 (3)ref|XP_009624399.1|3e-18PREDICTED: uncharacterized protein LOC104115460 isoform X3 [Nicotiana tomentosi755001302 (3)ref|XP_009624399.1|3e-60PREDICTED: uncharacterized protein LOC104115460 isoform X3 [Nicotiana tomentosi
JMSF050B22Sequence686013566 (3)ref|XP_009624396.1|9e-74PREDICTED: uncharacterized protein LOC104115460 isoform X1 [Nicotiana tomentosi700001302 (3)ref|XP_009624399.1|4e-48PREDICTED: uncharacterized protein LOC104115460 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF050B22+                                             ACCTGCAAGCCTGTTTGGGATGCGCT
                      ____________________________________________________________
consensus                                               ACCTGCAAGCCTGTTTGGGATGCGCT
 
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JMSF050B22+           TGAGGCAACTCCAGGCCGGGTAGCATCCTAGCGAGACGCCTATTACATAGTACTTCAATC
                      ____________________________________________________________
consensus             TGAGGCAACTCCAGGCCGGGTAGCATCCTAGCGAGACGCCTATTACATAGTACTTCAATC
 
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JMSF050B22+           CTAACTCCATCAGATCAGCTAGCTCTTCGATATCAGAACCTTCGCTCTTTAACGAGCGTT
                      ____________________________________________________________
consensus             CTAACTCCATCAGATCAGCTAGCTCTTCGATATCAGAACCTTCGCTCTTTAACGAGCGTT
 
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JMSF050B22+           TTGGATTTGGATCACTCTCTCCATACCCCGCTCGATCATATATCAAGACATATACCCCCA
                      ____________________________________________________________
consensus             TTGGATTTGGATCACTCTCTCCATACCCCGCTCGATCATATATCAAGACATATACCCCCA
 
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JMSF011B21+                        TTCATCAGAAGCCATAAAGCTCATTTCTTNGGAGCTGCCAAAGCCAT
JMSF050B22+           ATTCCTCAAGCAATTCATCAGAAGCCATAAAGCTCATTTCTTTGGAGCTGCCAAAGCCAT
                      ____________________________________________________________
consensus             ATTCCTCAAGCAATTCATCAGAAGCCATAAAGCTCATTTCTTTGGAGCTGCCAAAGCCAT
 
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JMSF012A03+           GGACTATAATGATTCTGTAATNGGATTTGTTCTTGGGCACCCCTCTTTCTCTGTAAGCCA
JMSF011B21+           GGACTATAATGATTCTGTAATTGGATTTGTTCTTGGGCACCCCTCTTTCTCTGTAAGCCA
JMSF050B22+           GGACTATAATGATTCTGTAATTGGATTTGTTCTTGGGCACCCCTCTTTCTCTGTAAGCCA
                      ____________________________________________________________
consensus             GGACTATAATGATTCTGTAATTGGATTTGTTCTTGGGCACCCCTCTTTCTCTGTAAGCCA
 
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JMSF012A03+           GGCACCTCCCATCACTGAGTCGAACCCTGGGCGAAGTGTCAACAGATTGGTCGTCCACCA
JMSF011B21+           GGCACCTCCCATCACTGAGTCGAACCCTGGGCGAAGTGTCAACAGATTGGTCGTCCACCA
JMSF050B22+           GGCACCTCCCATCACTGAGTCGAACCCTGGGCGAAGTGTCAACAGATTGGTCGTCCACCA
                      ____________________________________________________________
consensus             GGCACCTCCCATCACTGAGTCGAACCCTGGGCGAAGTGTCAACAGATTGGTCGTCCACCA
 
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JMSF012A03+           CAAGCGCCGCCGCATTGGGCTCTAATTTCTCAGTCAAAGAGGGCTCTGCCACCTGATCAC
JMSF011B21+           CAAGCGCCGCCGCATTGGGCTCTAATTTCTCAGTCAAAGAGGGCTCTGCCACCTGATCAC
JMSF050B22+           CAAGCGCCGCCGCATTGGGCTCTAATTTCTCAGTCAAAGAGGGCTCTGCCACCTGATCAC
                      ____________________________________________________________
consensus             CAAGCGCCGCCGCATTGGGCTCTAATTTCTCAGTCAAAGAGGGCTCTGCCACCTGATCAC
 
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JMSF012A03+           CAAAGCCGAAGCAACTCGTAATCAGAACAAGAATGCTCCTGAAAACCATTCTCTGAAAAC
JMSF011B21+           CAAAGCCGAAGCAACTCGTAATCAGAACAAGAATGCTCCTGAAAACCATTCTCTGAAAAC
JMSF050B22+           CAAAGCCGAAGCAACTCGTAATCAGAACAAGAATGCTCCTGAAAACCATTCTCTGAAAAC
                      ____________________________________________________________
consensus             CAAAGCCGAAGCAACTCGTAATCAGAACAAGAATGCTCCTGAAAACCATTCTCTGAAAAC
 
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JMSF012A03+           AAAACAGGCATCAAGATTCAAGCCAATGGTCTGCGC                        
JMSF011B21+           AAAACAGGCATCAAGATTCAAGCCAATGGTCTGCGC                        
JMSF050B22+           AAAACAGGCATCAAGATTCAAGCCAATGGTCTGCGCAGAAATCACAAGCAATTCAAAGGG
                      ____________________________________________________________
consensus             AAAACAGGCATCAAGATTCAAGCCAATGGTCTGCGCAGAAATCACAAGCAATTCAAAGGG
 
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JMSF050B22+           ATTCTTATTGGGCGTGAAGATGACAGATTGGCAGAAGAGGCTATACGAGCCTTTGACCTA
                      ____________________________________________________________
consensus             ATTCTTATTGGGCGTGAAGATGACAGATTGGCAGAAGAGGCTATACGAGCCTTTGACCTA
 
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JMSF050B22+           TAGTGACGCAACTTGAATTGCAGACAACTGTGTTTTTGGTAATTGAGTTTGTTTCGCCCC
                      ____________________________________________________________
consensus             TAGTGACGCAACTTGAATTGCAGACAACTGTGTTTTTGGTAATTGAGTTTGTTTCGCCCC