Contig 013558:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K04Sequence271013558 (4)720014119 (4)gb|KDO70388.1|2e-94hypothetical protein CISIN_1g024548mg [Citrus sinensis]
JMFF007P16Sequence520013558 (4)ref|XP_011094340.1|4e-15PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic760014119 (4)gb|KDO70388.1|4e-100hypothetical protein CISIN_1g024548mg [Citrus sinensis]
JMSF027J14Sequence600013558 (4)ref|XP_011094340.1|3e-24PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic709015058ref|XP_009605336.1|2e-22PREDICTED: protein TRANSPARENT TESTA 12-like [Nicotiana tomentosiformis]
JMSF049G22Sequence627013558 (4)ref|XP_011094340.1|3e-25PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic832014119 (4)gb|KDO70388.1|4e-61hypothetical protein CISIN_1g024548mg [Citrus sinensis]

Alignment

This contig is upended


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JMSF027J14+                                              TCTCTGTGACATTTTCAATGCCACT
JMSF049G22+                                            GCTCTCTGTGACATTTTCAATGCCACT
                      ____________________________________________________________
consensus                                              GCTCTCTGTGACATTTTCAATGCCACT
 
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JMSF027J14+           TTCCTGTCTTGGGGTCATCATTGTACTGTTCCCCTCACCTCTAAGCATTGAAATCTCTGG
JMFF007P16+                                                              AATCTCTGG
JMSF049G22+           TTCCTGTCTNGGGGTCATCATTGTACTGTTCCCCTCACCTCTAAGCATTGAAATCTCTGG
                      ____________________________________________________________
consensus             TTCCTGTCTTGGGGTCATCATTGTACTGTTCCCCTCACCTCTAAGCATTGAAATCTCTGG
 
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JMSF027J14+           ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
JMFF007P16+           ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
JMSF049G22+           ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
                      ____________________________________________________________
consensus             ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
 
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JMSF027J14+           ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
JMFF007P16+           ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
JMSF049G22+           ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
                      ____________________________________________________________
consensus             ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
 
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JMSF027J14+           ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
JMFF007P16+           ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
JMSF049G22+           ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
                      ____________________________________________________________
consensus             ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
 
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JMSF027J14+           AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
JMFF007P16+           AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
JMSF049G22+           AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
                      ____________________________________________________________
consensus             AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
 
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JMSF027J14+           ACAAATAGTCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
JMFF007P16+           ACAAATAGCCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
JMFF005K04+                    CATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
JMSF049G22+           ACAAATAGCCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
                      ____________________________________________________________
consensus             ACAAATAGCCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
 
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JMSF027J14+           AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
JMFF007P16+           AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
JMFF005K04+           AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
JMSF049G22+           AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
                      ____________________________________________________________
consensus             AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
 
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JMSF027J14+           TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
JMFF007P16+           TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
JMFF005K04+           TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
JMSF049G22+           TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
                      ____________________________________________________________
consensus             TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
 
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JMSF027J14+           TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
JMFF007P16+           TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
JMFF005K04+           TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
JMSF049G22+           TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
                      ____________________________________________________________
consensus             TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
 
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JMSF027J14+           GAGTAGAGCAAGGGATCCTATTCCTCCAAAT                             
JMFF007P16+           GAGTAGAGCAAGGGATCCTATTCCTCCAAAT                             
JMFF005K04+           GAGTAGAGCAAGGGATCCTATTCCTCCAAAT                             
JMSF049G22+           GAGTAGAGCAAGGGATCCTATTCCTCCAAATGTTATCATTTTTCATTTCACCCAACAATC
                      ____________________________________________________________
consensus             GAGTAGAGCAAGGGATCCTATTCCTCCAAATGTTATCATTTTTCATTTCACCCAACAATC