Contig 013534:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046B17Sequence533013534 (2)477013534 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046B17+ GGCAATCACAGGAAAGCTCCGTCATTCTCGATCCAAATCTCCTTCAGTTTCATTG
JMSF046B17- GGCAATCACAGGAAAGCTCCGTCATTCTCGATCCAAATCTCCTTCAGTTTCATTG
                      ____________________________________________________________
consensus GGCAATCACAGGAAAGCTCCGTCATTCTCGATCCAAATCTCCTTCAGTTTCATTG
 
. : . : . : . : . : . :
rJMSF046B17+ CTAGGGTCTTTGAAGTTGACTACCTCAATTAAAAAATAGACGAAGAGGCACAATCTCCTT
JMSF046B17- CTAGGGTCTTTGAAGTTGACTACCTCAATTAAAAAATAGACGAAGAGGCACAATCTCCTT
                      ____________________________________________________________
consensus CTAGGGTCTTTGAAGTTGACTACCTCAATTAAAAAATAGACGAAGAGGCACAATCTCCTT
 
. : . : . : . : . : . :
rJMSF046B17+ CCCCCGATTGTACCCCTCGTAATCCATAGCCGACGACTCTCAACGACGAAGCAAGATGAG
JMSF046B17- CCCCCGATTGTACCCCTCGTAATCCATAGCCGACGACTCTCAACGACGAAGCAAGATGAG
                      ____________________________________________________________
consensus CCCCCGATTGTACCCCTCGTAATCCATAGCCGACGACTCTCAACGACGAAGCAAGATGAG
 
. : . : . : . : . : . :
rJMSF046B17+ AGCTTCTCTCGAGCTGCCAAGAAGCGAAGATCCACTAACAATCAGCAAGGTCAACCCGGT
JMSF046B17- AGCTTCTCTCGAGCTGCCAAGAAGCGAAGATCCACTAACAATCAGCAAGGTCAACCCGGT
                      ____________________________________________________________
consensus AGCTTCTCTCGAGCTGCCAAGAAGCGAAGATCCACTAACAATCAGCAAGGTCAACCCGGT
 
. : . : . : . : . : . :
rJMSF046B17+ GGGGAGGTTACTCAGTGAATGTAATGGGCATTACACACTTAACCTCGCAAGCGCTCCACT
JMSF046B17- GGGGAGGTTACTCAGTGAATGTAATGGGCATTACACACTTAACCTCGCAAGCGCTCCACT
                      ____________________________________________________________
consensus GGGGAGGTTACTCAGTGAATGTAATGGGCATTACACACTTAACCTCGCAAGCGCTCCACT
 
. : . : . : . : . : . :
rJMSF046B17+ CTTTGACGTGAGGCAACATCTAGGGTATTTGAGAATACAATGAAATGTGCGGAACATTTG
JMSF046B17- CTTTGACGTGAGGCAACATCTAGGGTATTTGAGAATACAATGAAATGTGCGGAACATTTG
                      ____________________________________________________________
consensus CTTTGACGTGAGGCAACATCTAGGGTATTTGAGAATACAATGAAATGTGCGGAACATTTG
 
. : . : . : . : . : . :
rJMSF046B17+ TGTTTTGAGCGTTTAGTGAAGTTTTGGATTGTGCTAGATTGTAATGGTAGCTTTGTGTGT
JMSF046B17- TGTTTTGAGCGTTTAGTGAAGTTTTGGATTGTGCTAGATTGTAATGGTAGCTTTGTGTGT
                      ____________________________________________________________
consensus TGTTTTGAGCGTTTAGTGAAGTTTTGGATTGTGCTAGATTGTAATGGTAGCTTTGTGTGT
 
. : . : . : . : . : . :
rJMSF046B17+ GGTAATTGTTGACANCTTGTGGCCTACACAACCAANCACCGTATTTTGGTGATTTTGAAT
JMSF046B17- GGTAATTGTTGACA-CTTGTGGCCTACACAACCAA-CACCGTATTTTGGTGATTTTGAAT
                      ____________________________________________________________
consensus GGTAATTGTTGACANCTTGTGGCCTACACAACCAANCACCGTATTTTGGTGATTTTGAAT
 
. : . : . : . : . : . :
rJMSF046B17+ CC
JMSF046B17- CCATATTTCGATTGGAATTTCAATATGGCAGTGGTCAAGGACATATTTTTAAAANAAAAA
                      ____________________________________________________________
consensus CCATATTTCGATTGGAATTTCAATATGGCAGTGGTCAAGGACATATTTTTAAAANAAAAA