Contig 013521:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF023B02-                       TCTTTATTATACTATGTTGAATATATCTATAAAGCCATAAAATAAGA
                      ____________________________________________________________
consensus                          TCTTTATTATACTATGTTGAATATATCTATAAAGCCATAAAATAAGA
 
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rJMFF023B02-          GAGTCATAGAACCATATAAATTTCAAAAGAGGCATTCACCCTGTACTCTGCATTCAAGTT
rJMSF043I05-                                                    GTACTCTGCATTCAAGTT
                      ____________________________________________________________
consensus             GAGTCATAGAACCATATAAATTTCAAAAGAGGCATTCACCCTGTACTCTGCATTCAAGTT
 
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rJMFF023B02-          TGATACCAGTAAAACCTCTCTAGGGAGCTACGTTTTCGTAAAGTACAACGACATTTACCA
rJMSF043I05-          TGATACCAGTAAAACCTCTCTAGGGAGCTACGTTTTCGTAAAGTACAACGACATTTACCA
                      ____________________________________________________________
consensus             TGATACCAGTAAAACCTCTCTAGGGAGCTACGTTTTCGTAAAGTACAACGACATTTACCA
 
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rJMFF023B02-          CTAGGTTTCATGGCGTTCAAACACAGAATCTGGTCATCGCCTAACCTGAATCCCAAAGAT
rJMSF043I05-          CTAGGTTTCATGGCGTTCAAACACAGAATCTGGTCATCGCCTAACCTGAATCCCAAAGAT
                      ____________________________________________________________
consensus             CTAGGTTTCATGGCGTTCAAACACAGAATCTGGTCATCGCCTAACCTGAATCCCAAAGAT
 
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rJMFF023B02-          TTGGCTTTTGTGCCTTTCAAACCGCTGGGTCTTCGAGTGTGGCAGTGGAAACATCGTTTA
rJMSF043I05-          TTGGCTTTTGTGCCTTTCAAACCGCTGGGTCTTCGAGTGTGGCAGTGGAAACATCGTTTA
                      ____________________________________________________________
consensus             TTGGCTTTTGTGCCTTTCAAACCGCTGGGTCTTCGAGTGTGGCAGTGGAAACATCGTTTA
 
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rJMFF023B02-          TGCGAGGGTAAGCAGCTTTCTCGTCGAGCTGGTTTTGTGCCCATACCAACAGCTTCAGTA
rJMSF043I05-          TGCGAGGGTAAGCAGCTTTCTCGTCGAGCTGGTTTTGTGCCCATACCAACAGCTTCAGTA
                      ____________________________________________________________
consensus             TGCGAGGGTAAGCAGCTTTCTCGTCGAGCTGGTTTTGTGCCCATACCAACAGCTTCAGTA
 
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rJMFF023B02-          GGCTTGGAAGCTTGGGATCTTTTTCATGGCTTTGGCTAGTGAGAATTGCAGCATTCACCT
rJMSF043I05-          GGCTTGGAAGCTTGGGATCTTTTTCATGGCTTTGGCTAGTGAGAATTGCAGCATTCACCT
                      ____________________________________________________________
consensus             GGCTTGGAAGCTTGGGATCTTTTTCATGGCTTTGGCTAGTGAGAATTGCAGCATTCACCT
 
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rJMFF023B02-          CGCTTGCTGTCTTCAGACGCTGTGATATATCTAAAAGCTCTCCTAGAGGGCAGTTTGCAA
rJMSF043I05-          CGCTTGCTGTCTTCAGACGCTGTGATATATCTAAAAGCTCTCCTAGAGGGCAGTTTGCAA
                      ____________________________________________________________
consensus             CGCTTGCTGTCTTCAGACGCTGTGATATATCTAAAAGCTCTCCTAGAGGGCAGTTTGCAA
 
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rJMFF023B02-          CATCTTCAAATGCCAGCAATGCAACCGTCCTCTCCAACTCCTCTAAAAACCCTTGATTTT
rJMSF043I05-          CATCTTCAAATGCCAGCAATGCAACCGTCCTCTCCAACTCCTCTAAAAACCCTTGATTTT
                      ____________________________________________________________
consensus             CATCTTCAAATGCCAGCAATGCAACCGTCCTCTCCAACTCCTCTAAAAACCCTTGATTTT
 
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rJMFF023B02-          CCTCTCCCCTTGGAGCAAGTTCCTCCTGAGCAAACTCTAAAGCTTCTTCCACCTTCCCAT
rJMSF043I05-          CCTCTCCCCTTGGAGCAAGTTCCTCCTGAGCAAACTCTAAAGCTTCTTCCACCTTCCCAT
JMFF023B02+                                                              CCTTCCCAT
                      ____________________________________________________________
consensus             CCTCTCCCCTTGGAGCAAGTTCCTCCTGAGCAAACTCTAAAGCTTCTTCCACCTTCCCAT
 
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rJMFF023B02-          TCCTTATCAGTTCTATCAACCTTTGCTTTTGGAGATGGAAAAAGAGCTGGGGATTTGTAT
rJMSF043I05-          TCCTTATCAGTTCTATCAACCTTTGCTTTTGGAGATGGAAAAAGAGCTGGGGATTTGTAT
JMFF023B02+           TCCTTATCAGTTCTATCAACCTTTGCTTTTGGAGATGGAAAAAGAGCTGGGGATTTGTAT
                      ____________________________________________________________
consensus             TCCTTATCAGTTCTATCAACCTTTGCTTTTGGAGATGGAAAAAGAGCTGGGGATTTGTAT
 
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rJMFF023B02-          CCAGTATCTCAGGGTTCAAATCATTGACCTTTT                           
rJMSF043I05-          CCAGTATCTCAGGGTTCAAATCATTGACCTTTTCAATAGCATCCTCAACATTACCACATT
JMFF023B02+           CCAGTATCTCAGGGTTCAAATCATTGACCTTTTCAATAGCATCCTCAACATTACCACATT
JMSF043I05+                  CTCAGGGTTCAAATCATTGACCTTTTCAATAGCATCCTCAACATTACCACATT
                      ____________________________________________________________
consensus             CCAGTATCTCAGGGTTCAAATCATTGACCTTTTCAATAGCATCCTCAACATTACCACATT
 
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rJMSF043I05-          GTACTGCTTTTTTCACAGCCATCCGGTCAGTAATGGTTGCAAGATCTATGTCAGGTTCTG
JMFF023B02+           GTACTGCTTTTTTCACAGCCATCCGGTCAGTAATGGTTGCAAGATCTATGTCAGGTTCTG
JMSF043I05+           GTACTGCTTTTTTCACAGCCATCCGGTCAGTAATGGTTGCAAGATCTATGTCAGGTTCTG
                      ____________________________________________________________
consensus             GTACTGCTTTTTTCACAGCCATCCGGTCAGTAATGGTTGCAAGATCTATGTCAGGTTCTG
 
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rJMSF043I05-          TCCCAGATTCCATTCTGAATTTCTCTGCTGCTTCCACATAACCCTCAGTGACTAGGAAGT
JMFF023B02+           TCCCAGATTCCATTCTGAATTTCTCTGCTGCTTCCACATAACCCTCAGTGACTAGGAAGT
JMSF043I05+           TCCCAGATTCCATTCTGAATTTCTCTGCTGCTTCCACATAACCCTCAGTGACTAGGAAGT
                      ____________________________________________________________
consensus             TCCCAGATTCCATTCTGAATTTCTCTGCTGCTTCCACATAACCCTCAGTGACTAGGAAGT
 
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rJMSF043I05-          TCATCACTAGTTTATTCATGTCCTCCTTTCTAATCCTAACATTGTTCAGCTTCTTCTCCC
JMFF023B02+           TCATCACTAGTTTATTCATGTCCTCCTTTCTAATCCTAACATTGTTCAGCTTCTTCTCCC
JMSF043I05+           TCATCACTAGTTTATTCATGTCCTCCTTTCTAATCCTAACATTGTTCAGCTTCTTCTCCC
                      ____________________________________________________________
consensus             TCATCACTAGTTTATTCATGTCCTCCTTTCTAATCCTAACATTGTTCAGCTTCTTCTCCC
 
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rJMSF043I05-          ACTCTTCTCTTGTGATTACTTTCTTAGACATGGCCATGGCTTCAGTTTCTGCTAATTGGC
JMFF023B02+           ACTCTTCTCTTGTGATTACTTTCTTAGACATTGCCATGGCTTCAGTTTCTGCTAATTGGC
JMSF043I05+           ACTCTTCTCTTGTGATTACTTTCTTAGACATTGCCATGGCTTCAGTTTCTGCTAATTGGC
                      ____________________________________________________________
consensus             ACTCTTCTCTTGTGATTACTTTCTTAGACATTGCCATGGCTTCAGTTTCTGCTAATTGGC
 
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rJMSF043I05-          GTAA                                                        
JMFF023B02+           GTAAAACAATCCAGAACAATGACATCAGACTTCAGTATTGACCCATGTACACTGCCCGCT
JMSF043I05+           GTAAAACAATCCAGAACAATGACATCAGACTTCAGTATTGACCCATGTACACTGCCCGCT
                      ____________________________________________________________
consensus             GTAAAACAATCCAGAACAATGACATCAGACTTCAGTATTGACCCATGTACACTGCCCGCT
 
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JMFF023B02+           CCCCGGCAAACTCCAATTTATTCTGTAAAGGAGTTAC                       
JMSF043I05+           CCCCGGCAAACTCCAATTTATTCTGTAAAGGAGTTACAATTTCTACATTCTACCTTATAC
                      ____________________________________________________________
consensus             CCCCGGCAAACTCCAATTTATTCTGTAAAGGAGTTACAATTTCTACATTCTACCTTATAC
 
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JMSF043I05+           GGAGATATATACGGTATAAGCTTCTGTATATCAGCAGTAGTAGAAATGAAGGCTGAAGCT
                      ____________________________________________________________
consensus             GGAGATATATACGGTATAAGCTTCTGTATATCAGCAGTAGTAGAAATGAAGGCTGAAGCT
 
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JMSF043I05+           TAGCTTCCTTGCTAGATCGCCCGATCCTGTGCTTGATACAAAACCTTGATGTTGCTCCTC
                      ____________________________________________________________
consensus             TAGCTTCCTTGCTAGATCGCCCGATCCTGTGCTTGATACAAAACCTTGATGTTGCTCCTC