Contig 013473:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS022B08Sequence563013473 (5)ref|XP_009768306.1|6e-54PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840
JMFS061G09Sequence627013473 (5)
JMFS123F03Sequence576013473 (5)ref|XP_009768306.1|1e-39PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840
JMSF034P22Sequence607013473 (5)686002937 (4)emb|CAN75549.1|3e-81hypothetical protein VITISV_043541 [Vitis vinifera]
JMSF037J18Sequence690013473 (5)687002937 (4)emb|CAN75549.1|3e-81hypothetical protein VITISV_043541 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS022B08+ TGTCAGTTCATTTCCATTCAGAAGCAATAACTCTAACGTT
                      ____________________________________________________________
consensus TGTCAGTTCATTTCCATTCAGAAGCAATAACTCTAACGTT
 
. : . : . : . : . : . :
JMFS022B08+ GAAATACTTCCTATCTCCTTTGGTATACTTCCGCCAATACTGTTCCACATCACATCTAAT
                      ____________________________________________________________
consensus GAAATACTTCCTATCTCCTTTGGTATACTTCCGCCAATACTGTTCCACATCACATCTAAT
 
. : . : . : . : . : . :
JMFS022B08+ ATCTTCAAATGAGATAAGCGGCCAAGCTCAGGTGATAAACTTCCTGATAAGCCCATCTTC
JMFS123F03+ AGCTCAGGTGATAAACTTCCTGATAAGCCCATCTTC
                      ____________________________________________________________
consensus ATCTTCAAATGAGATAAGCGGCCAAGCTCAGGTGATAAACTTCCTGATAAGCCCATCTTC
 
. : . : . : . : . : . :
JMFS022B08+ AACAGTTGCAGTTCTCGCACATGAAAGTAGCCATCACTCAGTGTGTCATTATAGCATAGC
JMFS123F03+ AACAGTTGCAGTTCTCGCACATGAAAGTAGCCATCACTCAGTGTGTCATTATAGCATAGC
                      ____________________________________________________________
consensus AACAGTTGCAGTTCTCGCACATGAAAGTAGCCATCACTCAGTGTGTCATTATAGCATAGC
 
. : . : . : . : . : . :
JMFS022B08+ ACCCCTGTCCAATTTGAGGCACATGGATCTCCTGCCCTCCAGTTACTCAGATTCCTATTT
JMFS123F03+ ACCCCTGTCCAATTTGAGGCACATGGATCTCCTGCCCTCCAGTTACTCAGATTCCTATTT
                      ____________________________________________________________
consensus ACCCCTGTCCAATTTGAGGCACATGGATCTCCTGCCCTCCAGTTACTCAGATTCCTATTT
 
. : . : . : . : . : . :
JMFS022B08+ GGATCAATCAAGCTTCCCCTGATGGAACGCAATGCTTTTACTTCATCAGGATGAGTAACT
JMFS123F03+ GGATCAATCAAGCTTCCCCTGATGGAACGCAATGCTTTTACTTCATCAGGATGAGTAACT
                      ____________________________________________________________
consensus GGATCAATCAAGCTTCCCCTGATGGAACGCAATGCTTTTACTTCATCAGGATGAGTAACT
 
. : . : . : . : . : . :
JMFS022B08+ CGATCGTCTGCCCCAGTAACCAACATAAACCAGCAAATCCATACAATCAAACTCACTTCA
JMFS123F03+ CGATCGTCTGCCCCAGTAACCAACATAAACCAGCAAATCCATACAATCAAACTCACTTCA
JMSF034P22+ CCAGTAACCAACATAAACCAGCAAATCCATACAATCAAACTCACTTCA
JMSF037J18+ CAGCAAATCCATACAATCAAACTCACTTCA
                      ____________________________________________________________
consensus CGATCGTCTGCCCCAGTAACCAACATAAACCAGCAAATCCATACAATCAAACTCACTTCA
 
. : . : . : . : . : . :
JMFS022B08+ ATCAAAGCAATTCTCCTGGTGTTCATTTTGAAGATACGGACCCAAAATTCAAAAACTCCT
JMFS123F03+ ATCAAAGCAATTCTCCTGGTGTTCATTTTGAAGATACGGACCCAAAATTCAAAAACTCCT
JMSF034P22+ ATCAAAGCAATTCTCCTGGTGTTCATTTTGAAGATACGGACCCAAAATTCAAAAACTCCT
JMFS061G09+ TCATTTTGAAGATACGGACCCAAAATTCAAAAACTCCT
JMSF037J18+ ATCAAAGCAATTCTCCTGGTGTTCATTTTGAAGATACGGACCCAAAATTCAAAAACTCCT
                      ____________________________________________________________
consensus ATCAAAGCAATTCTCCTGGTGTTCATTTTGAAGATACGGACCCAAAATTCAAAAACTCCT
 
. : . : . : . : . : . :
JMFS022B08+ CTCAAACTACAAAACTATGAAACCTTGAGCATCCTTCCCCTTACAGAGGAGTAAAGAACA
JMFS123F03+ CTCAAACTACAAAACTATGAAACCTTGAGCATCCTTCCCCTTACAGAGGAGTAAAGAACA
JMSF034P22+ CTCAAACTACAAAACTATGAAACCTTGAGCATCCTTCCCCTTACAGAGGAGTAAAGAACA
JMFS061G09+ CTCAAACTACAAAACTATGAAACCTTGAGCATCCTTCCCCTTACAGAGGAGTAAAGAACA
JMSF037J18+ CTCAAACTACAAAACTATGAAACCTTGAGCATCCTTCCCCTTACAGAGGAGTAAAGAACA
                      ____________________________________________________________
consensus CTCAAACTACAAAACTATGAAACCTTGAGCATCCTTCCCCTTACAGAGGAGTAAAGAACA
 
. : . : . : . : . : . :
JMFS022B08+ CTGCTTGCCCACAATATGAGCAGCTGG
JMFS123F03+ CTGCTTGCCCACAATATGAGCAGCTGGTAGCTAGGAAGGCGCGGTTGGTAAATGTAATTC
JMSF034P22+ CTGCTTGCCCACAATATGAGCAGCTGGTAGCTAGGAAGGCGCGGTTGGTAAATGTAATTC
JMFS061G09+ CTGCTTGCCCACAATATGAGCAGCTGGTAGCTAGGAAGGCGCGGTTGGTAAATGTAATTC
JMSF037J18+ CTGCTTGCCCACAATATGAGCAGCTGGTAGCTAGGAAGGCGCGGTTGGTAAATGTAATTC
                      ____________________________________________________________
consensus CTGCTTGCCCACAATATGAGCAGCTGGTAGCTAGGAAGGCGCGGTTGGTAAATGTAATTC
 
. : . : . : . : . : . :
JMFS123F03+ TCTTAAGAAAACATGAATTTCCTTCGCTGGCGCTGACTGGGTCGCCATTTGAGGGATGGG
JMSF034P22+ TCTTAAGAAAACATGAATTTCCTTCGCTGGCGCTGACTGGGTCGCCATTTGAGGGATGGG
JMFS061G09+ TCTTAAGAAAACATGAATTTCCTTCGCTGGCGCTGACTGGGTCGCCATTTGAGGGATGGG
JMSF037J18+ TCTTAAGAAAACATGAATTTCCTTCGCTGGCGCTGACTGGGTCGCCATTTGAGGGATGGG
                      ____________________________________________________________
consensus TCTTAAGAAAACATGAATTTCCTTCGCTGGCGCTGACTGGGTCGCCATTTGAGGGATGGG
 
. : . : . : . : . : . :
JMFS123F03+ TTATTGTACGGTTGATAAATATTAGGTAGGTAGATAGCAACCCCGATACGATGATCATTG
JMSF034P22+ TTATTGTACGGTTGATAAATATTAGGTAGGTAGATAGCAACCCCGATACGATGATCATTG
JMFS061G09+ TTATTGTACGGTTGATAAATATTAGGTAGGTAGATAGCAACCCCGATACGATGATCATTG
JMSF037J18+ TTATTGTACGGTTGATAAATATTAGGTAGGTAGATAGCAACCCCGATACGATGATCATTG
                      ____________________________________________________________
consensus TTATTGTACGGTTGATAAATATTAGGTAGGTAGATAGCAACCCCGATACGATGATCATTG
 
. : . : . : . : . : . :
JMSF034P22+ ATCGGGTAAAAATGATGGCGAAAGCAAAACAGCAGCCTTTCGTTTAAAATATTCAAAGAG
JMFS061G09+ ATCGGGTAAAAATGATGGCGAGAGCAAAACAGCAGCCTTTCGTTTAAAATATTCAAAGAG
JMSF037J18+ ATCGGGTAAAAATGATGGCGAGAGCAAAACAGCAGCCTTTCGTTTAAAATATTCAAAGAG
                      ____________________________________________________________
consensus ATCGGGTAAAAATGATGGCGAGAGCAAAACAGCAGCCTTTCGTTTAAAATATTCAAAGAG
 
. : . : . : . : . : . :
JMSF034P22+ AAAAGCCAATTTCGTCTGCAATATAATATATTTGTTCAATATTGAAACTGGGAAAGTTGA
JMFS061G09+ AAAAGCCAATTTCGTCTGCAATATAATATATTTGTTCAATATTGAAACTGGGAAAGTTGA
JMSF037J18+ AAAAGCCAATTTCGTCTGCAATATAATATATTTGTTCAATATTGAAACTGGGAAAGTTGA
                      ____________________________________________________________
consensus AAAAGCCAATTTCGTCTGCAATATAATATATTTGTTCAATATTGAAACTGGGAAAGTTGA
 
. : . : . : . : . : . :
JMSF034P22+ CTTTTCTGGAGGGAGTAGTTGTGCACACATGTTGAGCTGTTCTTGAATATTAATATGATG
JMFS061G09+ CTTTTCTGGAGGGAGTAGTTGTGCACACATGTTGAGCTGTTCTTGAATATTAATATGATG
JMSF037J18+ CTTTTCTGGAGGGAGTAGTTGTGCACACATGTTGAGCTGTTCTTGAATATTAATATGATG
                      ____________________________________________________________
consensus CTTTTCTGGAGGGAGTAGTTGTGCACACATGTTGAGCTGTTCTTGAATATTAATATGATG
 
. : . : . : . : . : . :
JMSF034P22+ AACTGATGATGATGATGAAGGTTCATATTTCTGGGTTGAGAGAGTGGAAAAAAATCTGAA
JMFS061G09+ AACTGATGATGATGATGAAGGTTCATATTTCTGGGTTGAGAGAGTGGAAAAAAATCTGAA
JMSF037J18+ AACTGATGATGATGATGAAGGTTCATATTTCTGGGTTGAGAGAGTGGAAAAAAATCTGAA
                      ____________________________________________________________
consensus AACTGATGATGATGATGAAGGTTCATATTTCTGGGTTGAGAGAGTGGAAAAAAATCTGAA
 
. : . : . : . : . : . :
JMSF034P22+ AAATGAATCGGAACACTG
JMFS061G09+ AAATGAATCGGAACACTGGGAAGAATATGGCATCTTTTCGGATCCTTTGAGGATTCACAC
JMSF037J18+ AAATGAATCGGAACACTGGGAAGAATATGGCATCTTTTCGGATCCTTTGAGGATTCACAC
                      ____________________________________________________________
consensus AAATGAATCGGAACACTGGGAAGAATATGGCATCTTTTCGGATCCTTTGAGGATTCACAC
 
. : . : . : . : . : . :
JMFS061G09+ TTGCGACAAGCTAACCACAGTCGGATAGTGCCGTTGAAGCAGTCTTTCC
JMSF037J18+ TTGCGACAAGCTAACCACAGTCGGATAGTGCCGTTGAAGCAGTCTTTCCCGTCTGCCGCC
                      ____________________________________________________________
consensus TTGCGACAAGCTAACCACAGTCGGATAGTGCCGTTGAAGCAGTCTTTCCCGTCTGCCGCC