Contig 013471:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007F03Sequence549013471 (23)ref|XP_007163079.1|2e-104hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot769013471 (23)emb|CDP17103.1|2e-65unnamed protein product [Coffea canephora]
JMFF009D08Sequence568013471 (23)ref|XP_007163079.1|1e-104hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot715013471 (23)emb|CDP17103.1|8e-66unnamed protein product [Coffea canephora]
JMFF036H13Sequence615013471 (23)ref|XP_007163079.1|5e-104hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot719013471 (23)ref|XP_006419494.1|1e-54hypothetical protein CICLE_v10005909mg [Citrus clementina] gb|ESR32734.1| hypoth
JMFF038D10Sequence427013471 (23)ref|XP_007163079.1|6e-70hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot787013471 (23)gb|EYU21017.1|2e-56hypothetical protein MIMGU_mgv1a013756mg [Erythranthe guttata]
JMFF038I17Sequence512013471 (23)ref|XP_007163079.1|1e-94hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot669013471 (23)ref|XP_006419494.1|6e-55hypothetical protein CICLE_v10005909mg [Citrus clementina] gb|ESR32734.1| hypoth
JMFF049P07Sequence641013471 (23)ref|XP_004489107.1|5e-118PREDICTED: 60S ribosomal protein L19-1-like [Cicer arietinum]602013471 (23)gb|ABK93091.1|3e-31unknown [Populus trichocarpa]
JMFN010D18Sequence626013471 (23)ref|XP_007163079.1|1e-99hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot
JMSF018O18Sequence286013471 (23)gb|ABQ65182.1|4e-1760S ribosomal protein L19, partial [Paeonia suffruticosa]738010884 (13)gb|KGN44953.1|9e-87hypothetical protein Csa_7G398150 [Cucumis sativus]
JMSF026I06Sequence647013471 (23)ref|XP_007163079.1|2e-99hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot771013471 (23)gb|EYU43983.1|7e-71hypothetical protein MIMGU_mgv1a013788mg [Erythranthe guttata]
JMSF037G03Sequence655013471 (23)ref|XP_007163079.1|2e-99hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot765010884 (13)gb|KCW58398.1|5e-114hypothetical protein EUGRSUZ_H01084 [Eucalyptus grandis]
JMSF044M17Sequence950013471 (23)gb|KCW58398.1|1e-113hypothetical protein EUGRSUZ_H01084 [Eucalyptus grandis]711013471 (23)gb|KGN44953.1|3e-47hypothetical protein Csa_7G398150 [Cucumis sativus]
JMSF052D02Sequence667013471 (23)ref|XP_007163079.1|3e-107hypothetical protein PHAVU_001G204300g [Phaseolus vulgaris] gb|ESW35073.1| hypot927013471 (23)gb|KCW58398.1|4e-96hypothetical protein EUGRSUZ_H01084 [Eucalyptus grandis]
JMSF053K07Sequence650013471 (23)gb|KCW58398.1|3e-115hypothetical protein EUGRSUZ_H01084 [Eucalyptus grandis]829013471 (23)gb|EYU43983.1|9e-84hypothetical protein MIMGU_mgv1a013788mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF049P07- GGCACAAAGTATGTATTACAATAACAGAATCATTCAACCAGTGTTTTAACAACAAAATTG
rJMFF007F03- GTTTTAACAACAAAATTG
rJMSF044M17- GTTTTAACAACAAAATTG
rJMFF036H13- GTTTTAACAACAAAATTG
rJMFF038D10- GTGTTTTAACAACAAAATTG
rJMSF053K07- ACAACAAAATTG
rJMSF026I06- ACAAAATTG
rJMSF052D02- GTTTTAACAACAAAATTG
                      ____________________________________________________________
consensus GGCACAAAGTATGTATTACAATAACAGAATCATTCAACCAGTGTTTTAACAACAAAATTG
 
. : . : . : . : . : . :
rJMFF049P07- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMFF007F03- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMFF038I17- AATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMSF044M17- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMFF036H13- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMFF038D10- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMSF053K07- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMSF026I06- ACCAAAAAAACAGTAAATATGATGNCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMFF009D08- TATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
rJMSF052D02- ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
                      ____________________________________________________________
consensus ACCAAAAAAACAGTAAATATGATGTCTGGGGGAACAATGTCTCAACATCACCTTTCCAAT
 
. : . : . : . : . : . :
rJMFF049P07- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMFF007F03- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMFF038I17- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMSF044M17- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMFF036H13- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMFF038D10- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMSF053K07- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMSF026I06- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMFF009D08- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
rJMSF052D02- TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
JMSF044M17+ GTATATAGCAATTNGACAAATTATA
                      ____________________________________________________________
consensus TTGTTCATTTTAAACAACAGAATTTTGGTTTCAAAGTATATAGCAATTTGACAAATTATA
 
. : . : . : . : . : . :
rJMFF049P07- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMFF007F03- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMFF038I17- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMSF044M17- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMFF036H13- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMFF038D10- TCATGGA-CCAAGACCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMSF053K07- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMSF026I06- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMFF009D08- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
rJMSF052D02- TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
JMSF044M17+ TCATGGACCCAAGATNTACCTTGCATTGTGGACCNTAGTCCCAAAATAACAGTTAATAAA
                      ____________________________________________________________
consensus TCATGGA-CCAAGATCTACCTTGCATTGTGGACCCTAGT-CCAAAATAACAGTTAATAAA
 
. : . : . : . : . : . :
rJMFF049P07- TTGAAAGCGCACAT-AACATAAATTTTCGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMFF007F03- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMFF038I17- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMSF044M17- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMFF036H13- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMFF038D10- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMSF053K07- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMSF026I06- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMFF009D08- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
rJMSF052D02- TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
JMSF044M17+ TTGAAAGCGCACATAAACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
                      ____________________________________________________________
consensus TTGAAAGCGCACAT-AACATAAATTTTTGACCAAGGTCCATAATGCAAATATGATGTCTG
 
. : . : . : . : . : . :
rJMFF049P07- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMFF007F03- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMFF038I17- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMSF044M17- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMFF036H13- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMFF038D10- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMSF053K07- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMSF026I06- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMFF009D08- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
rJMSF052D02- GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
JMSF044M17+ GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
                      ____________________________________________________________
consensus GGGGAACAATGCCTCAACATCACCTTTCCAAGAGATGTCAAATCATTCACTTCTTGGACT
 
. : . : . : . : . : . :
rJMFF049P07- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMFF007F03- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMFF038I17- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMSF044M17- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMFF036H13- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMFF038D10- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMSF053K07- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMSF026I06- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMFF009D08- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
rJMSF052D02- TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
JMSF053K07+ ATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
JMSF044M17+ TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
JMFF049P07+ TTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
                      ____________________________________________________________
consensus TCTTGCCAGCATCGGCTGGTTTAGTTGCAGGTGGAACTGCAGCAGCGGCAGACCTCTCTC
 
. : . : . : . : . : . :
rJMFF049P07- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMFF007F03- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMFF038I17- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMSF044M17- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMFF036H13- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMFF038D10- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMSF053K07- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMSF026I06- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMFF009D08- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
rJMSF052D02- CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
JMSF053K07+ CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
JMFF009D08+ CCCTGCTTGCCTTGT
JMSF044M17+ CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
JMFF049P07+ CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
JMFF007F03+ CCTGCTTGCCTTGT
JMFF036H13+ CCTGCTTGCCTTGT
JMSF052D02+ TCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
                      ____________________________________________________________
consensus CAGGTCCCTGATTCAAGCGCTCCTCCCTCCGAGCAAACTTCCTTTCCCTGCTTGCCTTGT
 
. : . : . : . : . : . :
rJMFF049P07- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMFF007F03- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMFF038I17- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMSF044M17- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMFF036H13- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMFF038D10- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMSF053K07- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMSF026I06- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMFF009D08- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
rJMSF052D02- TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMSF053K07+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMFF009D08+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMSF044M17+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMFF038I17+ TGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMFF049P07+ TTNTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMFF007F03+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMFF036H13+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMFN010D18+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMSF052D02+ TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMSF026I06+ TTTAGCACGCTTGGCNTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
JMSF037G03+ TTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
                      ____________________________________________________________
consensus TTTTAGCACGCTTGGCCTCAAACTGGTCAGACAATGTCTTCTCTCTTGCCTTTTCTGCCT
 
. : . : . : . : . : . :
rJMFF049P07- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMFF007F03- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMFF038I17- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMSF044M17- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMFF036H13- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMFF038D10- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMSF053K07- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMSF026I06- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMFF009D08- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
rJMSF052D02- TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMSF053K07+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMFF009D08+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMSF044M17+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMFF038I17+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMFF038D10+ CTTTAACTT
JMFF049P07+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMFF007F03+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMFF036H13+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMFN010D18+ TTGATNTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMSF052D02+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMSF026I06+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
JMSF037G03+ TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
                      ____________________________________________________________
consensus TTGATTTGTGGATACTCTCCATAAGCACCCTCTTGTTCTTAAAGACATTTCCTTTAACTT
 
. : . : . : . : . : . :
rJMFF049P07- TCATG
rJMFF007F03- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMFF038I17- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMSF044M17- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMFF036H13- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMFF038D10- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACCTTCGGA
rJMSF053K07- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMSF026I06- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMFF009D08- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
rJMSF052D02- TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMSF053K07+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMFF009D08+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMSF044M17+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMFF038I17+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMFF038D10+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACCTTCGGA
JMFF049P07+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMFF007F03+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMFF036H13+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMFN010D18+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMSF052D02+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMSF026I06+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
JMSF037G03+ TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
                      ____________________________________________________________
consensus TCATGTACATATCATGGTACATGTGCTTATCAATTTTCTTTGATTCTCTGTACTTTCGGA
 
. : . : . : . : . : . :
rJMFF007F03- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMFF038I17- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMSF044M17- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTNGGCAATCTTG
rJMFF036H13- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMFF038D10- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMSF053K07- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMSF026I06- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMFF009D08- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
rJMSF052D02- GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMSF053K07+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFF009D08+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMSF044M17+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFF038I17+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFF038D10+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFF049P07+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFF007F03+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFF036H13+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMFN010D18+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMSF052D02+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMSF026I06+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
JMSF037G03+ GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
                      ____________________________________________________________
consensus GCAAGCGCCTTAGCACACGCATTCTCCTCATCCAGAGGATTTTTGTTGGCAATCTTGCCT
 
. : . : . : . : . : . :
rJMFF007F03- CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
rJMFF038I17- CCCTGGTACCTTTGCGCTTACCATAAC
rJMFF036H13- CCCTGGTACCTTTGCGCTTACCATAAC
rJMFF038D10- CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCGCCCCCTTTCTTTTTGCCTCCTTC
rJMSF053K07- CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
rJMSF026I06- CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
rJMFF009D08- CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
rJMSF052D02- CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMSF053K07+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFF009D08+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMSF044M17+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFF038I17+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFF038D10+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFF049P07+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFF007F03+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFF036H13+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMFN010D18+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMSF052D02+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMSF026I06+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
JMSF037G03+ CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
                      ____________________________________________________________
consensus CCCTGGTACCTTTGCGCTTACCATAACCAGAGTGGCG-CCCCTTTCTTTTTGCCTCCTTC
 
. : . : . : . : . : . :
rJMFF007F03- ATTCTACGTGCACG
rJMFF038D10- ATTCTACGTGCACGAAGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAA
rJMSF053K07- ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
rJMSF026I06- ATTCTACGTGCACG-AGACCNGGAGTGGATCNTAATTGGTTTCCTGA
rJMFF009D08- ATTCTACGTGCACG-AG
rJMSF052D02- ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMSF053K07+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFF009D08+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMSF044M17+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFF038I17+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFF038D10+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFF049P07+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFF007F03+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFF036H13+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMFN010D18+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMSF052D02+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMSF026I06+ ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
JMSF037G03+ ATTCTACGTGCACG-AGACCTAGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
                      ____________________________________________________________
consensus ATTCTACGTGCACG-AGACCTGGAGTGGATCTTAGTTGGTTTCCTGATAATGAAACCATC
 
. : . : . : . : . : . :
rJMSF053K07- TTTGACCAGTTTCCTAATGTTTTGCC
rJMSF052D02- TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMSF053K07+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFF009D08+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMSF044M17+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFF038I17+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFF038D10+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFF049P07+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFF007F03+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFF036H13+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMFN010D18+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMSF052D02+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMSF026I06+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMSF018O18+ CGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
JMSF037G03+ TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
                      ____________________________________________________________
consensus TTTGACCAGTTTCCTAATGTTTTGCCGGGAGTTGGCCATGGAGATTTCATTGCCTTCATT
 
. : . : . : . : . : . :
rJMSF052D02- GGGGTCAAGCCNAAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMSF053K07+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFF009D08+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMSF044M17+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFF038I17+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFF038D10+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFF049P07+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFF007F03+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFF036H13+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMFN010D18+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMSF052D02+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMSF026I06+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMSF018O18+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
JMSF037G03+ GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
                      ____________________________________________________________
consensus GGGGTCAAGCC-AAACCTTGCCACGGCCACACTTGAGTACGCTGGCAGCGAGACGCTTCT
 
. : . : . : . : . : . :
rJMSF052D02- GAAG
JMSF053K07+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMFF009D08+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCC
JMSF044M17+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMFF038I17+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCC
JMFF038D10+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMFF049P07+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMFF007F03+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCC
JMFF036H13+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMFN010D18+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMSF052D02+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMSF026I06+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
JMSF018O18+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTGCTAGGATTGCAGCCCAA
JMSF037G03+ GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTGCTAGGATTGCAGCCCAA
                      ____________________________________________________________
consensus GAAGCTTCAGCGACACCATCGTTGCTTCCTAGCCTCCTCGGTACTAGGATTGCAGCCCAA
 
. : . : . : . : . : . :
JMSF053K07+ AC
JMSF044M17+ AC
JMFF049P07+ AC
JMFF036H13+ ACGTTTAGAAGAAAGGAAGCACTGCAGCTTTTATATGTAGTGCTTTAGATACTCGTTTAG
JMFN010D18+ ACGTTTAGAAGAAAGGAAGCACTGCAGCTTTTATATGTAGTGCTTTAGATACTCGTTTAG
JMSF052D02+ ACGTTTAGAAGAAAGGAAGCACTGCAGCTTTTATATGTAGTGCTTTAGATACTCGTTTAG
JMSF026I06+ ACGTTTAGAAGAAAGGAAGCACTGCAGCTTTTATATGTAGTGCTTTAGATACTCGTTTAG
JMSF018O18+ ACGT
JMSF037G03+ ACGTTTAGAAGAAAGGAAGCACTGCAGCTTTTATATGTAGTGCTTTAGATACTCGTTTAG
                      ____________________________________________________________
consensus ACGTTTAGAAGAAAGGAAGCACTGCAGCTTTTATATGTAGTGCTTTAGATACTCGTTTAG
 
. : . : . : . : . : . :
JMFF036H13+ GGTT
JMFN010D18+ GGTTAGGGTTCTA
JMSF052D02+ GGTTAGGGTTCTA
JMSF026I06+ GGTTAGGGTTCTA
JMSF037G03+ GGTTAGGATTCTAGAGCGGAGGATCCCCAGTGATAGTAGCGAAATTCGTTCTAGATACCA
                      ____________________________________________________________
consensus GGTTAGGGTTCTAGAGCGGAGGATCCCCAGTGATAGTAGCGAAATTCGTTCTAGATACCA