Contig 013467:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005G04Sequence531013467 (6)ref|XP_008220169.1|2e-81PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X3 [Prunus mume
JMFN009O12Sequence627013467 (6)ref|XP_008220168.1|1e-102PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Prunus mume
JMFS045B12Sequence613013467 (6)ref|XP_010320354.1|6e-78PREDICTED: uroporphyrinogen-III synthase, chloroplastic [Solanum lycopersicum]
JMSF036M12Sequence673013467 (6)ref|XP_010320354.1|3e-93PREDICTED: uroporphyrinogen-III synthase, chloroplastic [Solanum lycopersicum] 725013467 (6)ref|XP_002282338.2|5e-53PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Vitis vinif
JMSF038M12Sequence516013467 (6)ref|XP_009607743.1|6e-15PREDICTED: uroporphyrinogen-III synthase, chloroplastic isoform X2 [Nicotiana t

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038M12- GAAGGCAACCGAATGCCAAATAGGGTGGACGACGCGTAACATGATTTTTCGAAAGAT
rJMSF036M12- AACATGATTTTTCGAAAGAT
                      ____________________________________________________________
consensus GAAGGCAACCGAATGCCAAATAGGGTGGACGACGCGTAACATGATTTTTCGAAAGAT
 
. : . : . : . : . : . :
rJMSF038M12- AAAGAAGGAACTATCCTAAAGGTTTAACTGAATACAGANCNAAACATTCANTTGTANATG
rJMSF036M12- AAAGAAGGAACTATCCTAAA-GTTTAACTGAATACAGATCTAAACATTCAATTGTACATG
                      ____________________________________________________________
consensus AAAGAAGGAACTATCCTAAAGGTTTAACTGAATACAGATCTAAACATTCAATTGTACATG
 
. : . : . : . : . : . :
rJMSF038M12- GTCAAGCCTGCGATATCTCAGTTAGAACTCGACAGANCCACGGGGGATATCTGCNCTCAC
rJMSF036M12- GTCAAGCCTGCGATATCTCAGTTAGAACTCGACAGAACCACGTGGGATATCTGCACTCAC
                      ____________________________________________________________
consensus GTCAAGCCTGCGATATCTCAGTTAGAACTCGACAGAACCACGTGGGATATCTGCACTCAC
 
. : . : . : . : . : . :
rJMSF038M12- GCAGCAGAATGNCCTGCTGAAACATATATATACAGCTGAAGATATCCTGAANAAACATAA
rJMSF036M12- GCAGCAGAATGACCTGCTGAAACATATATATACAGCTGAAGATATCCTGAAAAAACATAA
                      ____________________________________________________________
consensus GCAGCAGAATGACCTGCTGAAACATATATATACAGCTGAAGATATCCTGAAAAAACATAA
 
. : . : . : . : . : . :
rJMSF038M12- TTCCAGCCAATGCTTTTATTGCCTCGTCGGCAAACTCCCTGCCNGATTAACATCTAGGAA
rJMSF036M12- TTCCAGCCAATGCTTTTATTGCCTCGTCGGCAAACTCCCTGCCAGATTAACATCTAGGAA
                      ____________________________________________________________
consensus TTCCAGCCAATGCTTTTATTGCCTCGTCGGCAAACTCCCTGCCAGATTAACATCTAGGAA
 
. : . : . : . : . : . :
rJMSF038M12- CACAGAAGCATACAACATTTAATTTTTATACNCCCTACATTTTCTCANGGACTCCCAAGG
rJMSF036M12- CACAGAAG-ATACAACATTTAATTTTTATACACCCTACATTTTCTCAAGGACTCCCAAGG
                      ____________________________________________________________
consensus CACAGAAGCATACAACATTTAATTTTTATACACCCTACATTTTCTCAAGGACTCCCAAGG
 
. : . : . : . : . : . :
rJMSF038M12- NCTCGAGAATGCTANCAACCCNCCCATCANGACCAGGATTTTCCGGATGATATACNTTCC
rJMSF036M12- CCTCAAGAATGCTATCAACCCACCCATCAAGACCAGGATTTTCCGGATGATATACATTCC
JMFN009O12+ AGAATGCTATCAACCCACCCATCAAGACCAGGATTTTCCGGATGATATACATTCC
                      ____________________________________________________________
consensus CCTCGAGAATGCTATCAACCCACCCATCAAGACCAGGATTTTCCGGATGATATACATTCC
 
. : . : . : . : . : . :
rJMSF038M12- TCAGTCCTAGTCTTTTANCTGCCAAAGCANNTGTTTCACCGATGCATGCTATTGCATTGC
rJMSF036M12- TCAGTCCTAGTCTTTTAGCTGCCAAAGCAGTTGTTTCACCGATGCATGCTATTGCATTGC
JMFN005G04+ CCAAAGCAGTTGTTTCACGGATGCATGCTATTGCATTGC
JMFN009O12+ TCAGTCCTAGTCTTTTAGCTGCCAAAGCAGTTGTTTCACCGATGCATGCTATTGCATTGC
                      ____________________________________________________________
consensus TCAGTCCTAGTCTTTTAGCTGCCAAAGCAGTTGTTTCACCGATGCATGCTATTGCATTGC
 
. : . : . : . : . : . :
rJMSF038M12- CCCACTCTT-CNAATGCTGGAACAAGATTAGCCCATGC
rJMSF036M12- CCCACTCTT-CCAATGCTGGAACAAGATTAGCCCATGCACGAATGGCAGAAGGTGATGCT
JMFN005G04+ CCCACTCTTACAAATGCTGGAACAAGATTAGCCCATGCATGAATGGCAGAAGGTGATGTT
JMFN009O12+ CCCACTCTT-CCAATGCTGGAACAAGATTAGCCCATGCACGAATGGCAGAAGGTGATGCT
                      ____________________________________________________________
consensus CCCACTCTT-CCAATGCTGGAACAAGATTAGCCCATGCACGAATGGCAGAAGGTGATGCT
 
. : . : . : . : . : . :
rJMSF036M12- ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
JMFN005G04+ ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
JMFN009O12+ ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
JMSF036M12+ ATCAACATGTTGGATG
                      ____________________________________________________________
consensus ACTGCAACAACAGGAGCACATAGTGCTATTTTAAGAAGTGCCTCATCAACATGTTGGATG
 
. : . : . : . : . : . :
rJMSF036M12- GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
JMFN005G04+ GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
JMFN009O12+ GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
JMFS045B12+ CGCTTTGAAAGGCCTTCC
JMSF036M12+ GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
                      ____________________________________________________________
consensus GGTGCCGTAGTGTATGTATTCAACCGAGTAACCTCAAATCCACGCTTTGAAAGGCCTTCC
 
. : . : . : . : . : . :
rJMSF036M12- TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGNTCTCT
JMFN005G04+ TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
JMFN009O12+ TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
JMFS045B12+ TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
JMSF036M12+ TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
                      ____________________________________________________________
consensus TCAATCTCACCACTGGCTTTTGCTGAAGCAGGATATAGAACAGTACATCTTTTGTTCTCT
 
. : . : . : . : . : . :
rJMSF036M12- TGCTTAGGAAGCTCTAAAGCTA
JMFN005G04+ TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
JMFN009O12+ TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
JMFS045B12+ TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
JMSF036M12+ TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
                      ____________________________________________________________
consensus TGCTTAGGAAGCTCTAAAGCTAAAACCTTGCCAGTTGCTTTGGATGGTGCAAAGGCAACA
 
. : . : . : . : . : . :
JMFN005G04+ TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
JMFN009O12+ TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
JMFS045B12+ TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
JMSF036M12+ TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
                      ____________________________________________________________
consensus TCAAGATACCGCTTTGATGACTGAGTAACTTCATCAAATATGCTAGCTGTACCAGCCCCA
 
. : . : . : . : . : . :
JMFN005G04+ ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
JMFN009O12+ ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
JMFS045B12+ ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
JMSF036M12+ ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
                      ____________________________________________________________
consensus ACAACAGCAATTCTGACATTTGGGGTTCCAGCAACCTTCCAAGCATCAAGAAAAACCAGA
 
. : . : . : . : . : . :
JMFN005G04+ CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
JMFN009O12+ CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTTCTGGACTCAACACCGAA
JMFS045B12+ CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
JMSF036M12+ CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
                      ____________________________________________________________
consensus CCAGCCTCTGGTGAAGTTATGACAATCCAGTCAAAGGTGTTTT---GACTCAACACCGAA
 
. : . : . : . : . : . :
JMFN005G04+ GGAAGCCTATCCAAA
JMFN009O12+ GGAAGCCTATCCAAATCAGGTAGGTGAGTGTGT
JMFS045B12+ GGAAGCCTATCCAAATCAGGTAGGTGCGTGTGTTGTATGAGAGGAAGCTCAAGACAACCA
JMSF036M12+ GGAAGCCTATCCAAATCAGGTAGGTGCGTGTGTTGTATGAGAGGAAGCTCAAGACAACCA
                      ____________________________________________________________
consensus GGAAGCCTATCCAAATCAGGTAGGTGCGTGTGTTGTATGAGAGGAAGCTCAAGACAACCA
 
. : . : . : . : . : . :
JMFS045B12+ ATCCCATGTATTGCCAAAGCCTTGATGAGTTTGCCGTTCTTGCCGCGTTCTCTGGTGACG
JMSF036M12+ ATCCCATGTATTGCCAAAGCCTTGATGAGTTTGCCGTTCTTGCCGCGTTCTCTGGTGACG
                      ____________________________________________________________
consensus ATCCCATGTATTGCCAAAGCCTTGATGAGTTTGCCGTTCTTGCCGCGTTCTCTGGTGACG
 
. : . : . : . : . : . :
JMFS045B12+ ACAACTGCCGGCTGCTTGGAAGATGAAGCCGAGGAGACTAAAGGATCAGAAGATTCAATT
JMSF036M12+ ACAACTGCCGGCTGCTTGGAAGATGAAGCCGAGGAGACTAAAGGATCAGAAGATTCAATT
                      ____________________________________________________________
consensus ACAACTGCCGGCTGCTTGGAAGATGAAGCCGAGGAGACTAAAGGATCAGAAGATTCAATT
 
. : . : . : . : . : . :
JMFS045B12+ CTAACGCAGCGAGGAGAGATTTTGCTCCGGTGGACTTGCAGACGAGTGGTAGAGGGACGT
JMSF036M12+ CTAACGCAGCGAGGAGAGATTTTGCTCCGGTGGACTTGCAGACGAGTGGTAGAGGGACGT
                      ____________________________________________________________
consensus CTAACGCAGCGAGGAGAGATTTTGCTCCGGTGGACTTGCAGACGAGTGGTAGAGGGACGT
 
. : . : . : . : . : . :
JMFS045B12+ GAGGGAGGAGGAAGAGGAGAGAGAAAGGAGAGCGAAAGCTGAGGCATGACGACGGTAA
JMSF036M12+ GAGGGAGGAGGAAGAGGAGAGAGAAAGGAGAGCGAAAGCTGAGGCATGACGACGGTAACC
                      ____________________________________________________________
consensus GAGGGAGGAGGAAGAGGAGAGAGAAAGGAGAGCGAAAGCTGAGGCATGACGACGGTAACC