Contig 013453:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF004F09-                                                    TTATATCTAACATGGAAT
                      ____________________________________________________________
consensus                                                       TTATATCTAACATGGAAT
 
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rJMFF004F09-          TTTTACAAAAACAGTAAAATCTCACTGCTCAGCTCGCATGGAAATATCATCTCGTATCTC
                      ____________________________________________________________
consensus             TTTTACAAAAACAGTAAAATCTCACTGCTCAGCTCGCATGGAAATATCATCTCGTATCTC
 
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rJMFF004F09-          CCTCGTTACATTCATATTACCACTACACAACAATATTACAACAGAAAAAGAAAAAAGAAA
rJMSF034P13-                                         AATATTACAACAGAAAAAGAAAAAAGAAA
                      ____________________________________________________________
consensus             CCTCGTTACATTCATATTACCACTACACAACAATATTACAACAGAAAAAGAAAAAAGAAA
 
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rJMFF004F09-          AATTGAACGGCCAANGTTATATATATTACATATATATTACTTCACAATTTCTAGTGGAGT
rJMSF034P13-          AATTGAACGGCCAA-CTTATATATATTACATATATATTACTTCACAATTTCTAGTGGAGT
                      ____________________________________________________________
consensus             AATTGAACGGCCAANGTTATATATATTACATATATATTACTTCACAATTTCTAGTGGAGT
 
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rJMFF004F09-          CGGATATGATTTCATATCATATGATTTATAATGAAATGTCAAGCATGTTGACGGCCACAT
rJMSF034P13-          CGGATATGATTTCATATCATATGATTTATAATGAAATGTCAAGCATGTTGACGGCCAGAT
                      ____________________________________________________________
consensus             CGGATATGATTTCATATCATATGATTTATAATGAAATGTCAAGCATGTTGACGGCCAGAT
 
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rJMFF004F09-          TCTCCATCATTAGGCGCTCAACTTCTCCGGCACATGGCGTCTTCTTCACCACACCCCCGT
rJMSF034P13-          TCTCCATCATTAGGCGCTCAACTTCTCCGGCACATGGCGTCTTCTTCACCACACCCCCGT
                      ____________________________________________________________
consensus             TCTCCATCATTAGGCGCTCAACTTCTCCGGCACATGGCGTCTTCTTCACCACACCCCCGT
 
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rJMFF004F09-          TAAAGGAGGAGGTGTGGTTGGGGAGGGGGTTTTTGGTGGTCCTGAGGGGGCAGGCGGANA
rJMSF034P13-          TAAAGGAGGAGGTGTGGTTGGGGAGGGGGTTTTTGGTGGTCCTGAGGGGGCAGGCGGAGA
JMSF034P13+                                                                   GAGA
                      ____________________________________________________________
consensus             TAAAGGAGGAGGTGTGGTTGGGGAGGGGGTTTTTGGTGGTCCTGAGGGGGCAGGCGGAGA
 
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rJMFF004F09-          GGGGAAGAACGGGGAGGTTTTGGCAGTTGCAGCTCTCGATCATGTAGCCGTCGGGATCGT
rJMSF034P13-          GGGGAAGAACGGGGAGGTTTTGGCAGTTGCAGATCTCGATCATGTAGCCGTCGGGATCGT
JMSF034P13+           GGGGAAGAACGGGGAGGTTTTGGCAGTTGCAGATCTCGATCATGTAGCCGTCGGGATCGT
                      ____________________________________________________________
consensus             GGGGAAGAACGGGGAGGTTTTGGCAGTTGCAGATCTCGATCATGTAGCCGTCGGGATCGT
 
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rJMFF004F09-          GGAANAAGAGCTGATCCACAATGACGCCGTCTTCCTTAACCTTCGCCGTCACGTACTCCA
rJMSF034P13-          GGAAGAAGAGCTGATCCACAATGACGCCGTCTTCCTTAACCTTCGCCGTCACGTACTCCA
JMSF034P13+           GGAAGAAGAGCTGATCCACAATGACGCCGTCTTCCTTAACCTTCGCCGTCACGTACTCCA
                      ____________________________________________________________
consensus             GGAAGAAGAGCTGATCCACAATGACGCCGTCTTCCTTAACCTTCGCCGTCACGTACTCCA
 
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rJMFF004F09-          TTTTCATGTCGTCGAGGTTCTTGATGATGANATCCATGTCGGAGCACTGGAACGACCATG
rJMSF034P13-          TTTTCATGTCGTCGAGGTTCTTGATGATGAGATCCATGTCGGAGCACTGGAACGA-AATG
JMFF004F09+                 TGTCGTCGAGGTTCTTGATGATGAGATCCATGTCGGAGCACTGGAACGA-AATG
JMSF034P13+           TTTTCATGTCGTCGAGGTTCTTGATGATGAGATCCATGTCGGAGCACTGGAACGA-AATG
                      ____________________________________________________________
consensus             TTTTCATGTCGTCGAGGTTCTTGATGATGAGATCCATGTCGGAGCACTGGAACGA-AATG
 
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rJMFF004F09-          TGGATGTCTTTTGGGTTTCTTTTCCCTTTCTTT                           
rJMSF034P13-          TGGTTGTCTTTTGGGTTTATTTTCCCTTTCTTTGTCGGAACCTTCTCCGCTCCCAGCAAA
JMFF004F09+           TGGTTGTCTTTTGGGTTTATTTTCCCTTTCTTTGTCGGAACCTTCTCCGCTCCCAGCAAA
JMSF034P13+           TGGTTGTCTTTTGGGTTTATTTTCCCTTTCTTTGTCGGAACCTTCTCCGCTCCCAGCAAA
                      ____________________________________________________________
consensus             TGGTTGTCTTTTGGGTTTATTTTCCCTTTCTTTGTCGGAACCTTCTCCGCTCCCAGCAAA
 
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rJMSF034P13-          TGGATCCCAATCCCATGGTTGAACAACCAAGCTCCTTCAAAGTCNAAGGAGGAGGGGCGC
JMFF004F09+           TGGATCCCAATCCCATGGTTGAACAACCAAGCTCCTTCAAAGTCGAAGGAGGAGGGGCGC
JMSF034P13+           TGGATCCCAATCCCATGGTTGAACAACCAAGCTCCTTCAAAGTCGAAGGAGGAGGGGCGC
                      ____________________________________________________________
consensus             TGGATCCCAATCCCATGGTTGAACAACCAAGCTCCTTCAAAGTCGAAGGAGGAGGGGCGC
 
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rJMSF034P13-          TTGATGAGCACAAATCCGAGAACTCGCTCATAAAACTCCACGGATTTCCTGACGGATTTG
JMFF004F09+           TTGATGAGCACAAATCCGAGAACTCGCTCATAAAACTCCACGGATTTCCTGACGGATTTG
JMSF034P13+           TTGATGAGCACAAATCCGAGAACTCGCTCATAAAACTCCACGGATTTCCTGACGGATTTG
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consensus             TTGATGAGCACAAATCCGAGAACTCGCTCATAAAACTCCACGGATTTCCTGACGGATTTG
 
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rJMSF034P13-          CAGACAAAGGAAACATGGTTCAGCGCCNGCAATGGCATTCTCTTTTCCTCNTCATCTGAA
JMFF004F09+           CAGACAAAGGAAACATGGTTCAGCGCCAGCAATGGCATTCTCTTTTCCTCATCATCTGAA
JMSF034P13+           CAGACAAAGGAAACATGGTTCAGCGCCAGCAATGGCATTCTCTTTTCCTCATCATCTGAA
                      ____________________________________________________________
consensus             CAGACAAAGGAAACATGGTTCAGCGCCAGCAATGGCATTCTCTTTTCCTCATCATCTGAA
 
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rJMSF034P13-          AGGANCGACCATGAAGGA                                          
JMFF004F09+           AGGAACGACCATGAAGGAGAAGAAGCAGAAGCAGAAGATGAAGATGAAGATGATTCTACC
JMSF034P13+           AGGAACGACCATGAAGGAGAAGAAGCAGAAGCAGAAGATGAAGATGAAGATGATTCTACC
                      ____________________________________________________________
consensus             AGGAACGACCATGAAGGAGAAGAAGCAGAAGCAGAAGATGAAGATGAAGATGATTCTACC
 
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JMFF004F09+           CAGCTCTCTATCTCTCTACCCATTCTGATCGATCTTCACTCTCTTCAAATCAAATGATAG
JMSF034P13+           CAGCTCTCTATCTCTCTACCCATTCTGATCGATCTTCACTCTCTTCAAATCAAATGATAG
                      ____________________________________________________________
consensus             CAGCTCTCTATCTCTCTACCCATTCTGATCGATCTTCACTCTCTTCAAATCAAATGATAG
 
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JMFF004F09+           ATGTTTGAGCTAGCGCTGTAAGTATATATATATTTATGCAAATGGAACTAGCTAGAAGGT
JMSF034P13+           ATGTTTGAGCTAGCGCTGTAAGTATATATATATTTATGCAAATGGAACTAGCTAGAAGGT
                      ____________________________________________________________
consensus             ATGTTTGAGCTAGCGCTGTAAGTATATATATATTTATGCAAATGGAACTAGCTAGAAGGT
 
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JMFF004F09+           GCTAGATAGATAGATAGATATGCAGATTGTATAATAAGAGAAGACGAATTGTAGATGAT 
JMSF034P13+           GCTAGATAGATAGATAGATATGCAGATTGTATAATAAGAGAAGACGAATTGTAGATGATC
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consensus             GCTAGATAGATAGATAGATATGCAGATTGTATAATAAGAGAAGACGAATTGTAGATGATC