Contig 013450:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001M03Sequence273013450 (12)
JMSF003M15Sequence228013450 (12)746009933 (12)emb|CAB51610.1|2e-93ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF004P21Sequence269013450 (12)452009933 (12)emb|CAB52196.1|1e-17ADP-glucose pyrophosphorylase [Ipomoea batatas]
JMSF005C08Sequence267013450 (12)262009933 (12)
JMSF012C15Sequence449013450 (12)gb|AGB85109.1|8e-35ADP-glucose pyrophosphorylase large subunit 1 [Ipomoea batatas]748009933 (12)emb|CAB51610.1|3e-95ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF016C24Sequence248013450 (12)764009933 (12)emb|CAB51610.1|1e-73ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF016I24Sequence403013450 (12)gb|AGB85109.1|2e-25ADP-glucose pyrophosphorylase large subunit 1 [Ipomoea batatas]792009933 (12)emb|CAB51610.1|5e-90ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF033E07Sequence696013450 (12)gb|AGB85109.1|1e-96ADP-glucose pyrophosphorylase large subunit 1 [Ipomoea batatas]734009933 (12)emb|CAB51610.1|3e-94ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF034M03Sequence662013450 (12)gb|AGB85109.1|2e-66ADP-glucose pyrophosphorylase large subunit 1 [Ipomoea batatas]698009933 (12)emb|CAB51610.1|4e-81ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF035D17Sequence713013450 (12)dbj|BAF47746.1|468ADP-glucose pyrophosphorylase beta subunit IbAGPb1A [Ipomoea batatas]720009933 (12)emb|CAB51610.1|2e-95ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF043L18Sequence716013450 (12)gb|AGB85109.1|1e-99ADP-glucose pyrophosphorylase large subunit 1 [Ipomoea batatas]746009933 (12)emb|CAB51610.1|3e-95ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]
JMSF046M10Sequence702013450 (12)gb|AGB85109.1|5e-99ADP-glucose pyrophosphorylase large subunit 1 [Ipomoea batatas]760009933 (12)emb|CAB51610.1|2e-98ADP-glucose pyrophosphorylase large subunit [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035D17+ GAAAGAGTAATATCAGAATTGCGTTCGATGTGATTCTGCACTAAGTCCATGTAATCCA
                      ____________________________________________________________
consensus GAAAGAGTAATATCAGAATTGCGTTCGATGTGATTCTGCACTAAGTCCATGTAATCCA
 
. : . : . : . : . : . :
JMSF035D17+ TGCGATAAAGTTGATCTCCTGACAGAATAACTATATTATCAATGTCCTTGTTCTTCGCGT
                      ____________________________________________________________
consensus TGCGATAAAGTTGATCTCCTGACAGAATAACTATATTATCAATGTCCTTGTTCTTCGCGT
 
. : . : . : . : . : . :
JMSF035D17+ CCTCAAAAACCCACGTAAACTGTCTAACAGCATCTGCAGTTCCCTGAAACCAATTCATTC
                      ____________________________________________________________
consensus CCTCAAAAACCCACGTAAACTGTCTAACAGCATCTGCAGTTCCCTGAAACCAATTCATTC
 
. : . : . : . : . : . :
JMSF035D17+ CCATTTCCCCTTGCGTTTGGGTTGCAGCCAACACCTCAACAAATCCATCTCCGAAGCTCA
JMSF046M10+ GAAGCTCA
JMSF043L18+ GAAGCTCA
                      ____________________________________________________________
consensus CCATTTCCCCTTGCGTTTGGGTTGCAGCCAACACCTCAACAAATCCATCTCCGAAGCTCA
 
. : . : . : . : . : . :
JMSF035D17+ CACCATTGCCAAAGTAGGTACGGGAAATGTGACGGTTAAGAGAAGCGGAATTGAACTGGG
JMSF033E07+ CCATTGCCAAAGTAGGTACGGGAAATGTGACGGTTAAGAGAAGCGGAATTGAACTGGG
JMSF046M10+ CACCATTGCCAAAGTAGGTACGGGAAATGTGACGGTTAAGAGAAGTGGAATTGAACTGGG
JMSF043L18+ CACCATTGCCAAAGTAGGTACGGGAAATGTGACGGTTAAGAGAAGCGGAATTGAACTGGG
                      ____________________________________________________________
consensus CACCATTGCCAAAGTAGGTACGGGAAATGTGACGGTTAAGAGAAGCGGAATTGAACTGGG
 
. : . : . : . : . : . :
JMSF035D17+ TGAGCACGAAGATCTTGTTAACCCCGCTGTTGATGCAATTGCTCATCGGAATGTCAATCA
JMSF033E07+ TGAGCACGAAGATCTTGTTAACCCCGCTGTTGATGCAATTGCTCATCGGAATGTCAATCA
JMSF046M10+ TGAGCACGAAGATCTTGTTAACCCCGCTGTTGATGCAATTGCTCATCGGAATGTCAATCA
JMSF043L18+ TGAGCACGAAGATCTTGTTAACCCCGCTGTTGATGCAATTGCTCATCGGAATGTCAATCA
JMSF034M03+ CA
                      ____________________________________________________________
consensus TGAGCACGAAGATCTTGTTAACCCCGCTGTTGATGCAATTGCTCATCGGAATGTCAATCA
 
. : . : . : . : . : . :
JMSF035D17+ ACCTATAGCATCCTCCAACTGGAACAGCAGGGGTTGCAGCTCGGTTTGTGAGAGGGAATA
JMSF033E07+ ACCTATAGCATCCTCCAACTGGAACAGCAGGGGTTGCAGCTCGGTTTGTGAGAGGGAATA
JMSF046M10+ ACCTATAGCATCCTCCAACTGGAACAGCAGGGGTTGCAGCTCGGTTTGTGAGAGGGAATA
JMSF043L18+ ACCTATAGCATCCTCCAACTGGAACAGCAGGGGTTGCAGCTCGGTTTGTGAGAGGGAATA
JMSF034M03+ ACCTATAGCATCCTCCAACTGGAACAGCAGGGGTTGCAGCTCGGTTTGTGAGAGGGAATA
                      ____________________________________________________________
consensus ACCTATAGCATCCTCCAACTGGAACAGCAGGGGTTGCAGCTCGGTTTGTGAGAGGGAATA
 
. : . : . : . : . : . :
JMSF035D17+ GTTGTGTCCCTGCACCCCCTCCCAGTATGATTGCCGCCACATTCTTAGGGTTTGCCCGAC
JMSF033E07+ GTTGTGTCCCTGCACCCCCTCCCAGTATGATTGCCGCCACATTCTTAGGGTTTGCCCGAC
JMSF046M10+ GTTGTGTCCCTGCACCCCCTCCCAGTATGATTGCCGCCACATTCTTAGGGTTTGCCCGAC
JMSF043L18+ GTTGTGTCCCTGCACCCCCTCCCAGTATGATTGCCGCCACATTCTTAGGGTTTGCCCGAC
JMSF034M03+ GTTGTGTCCCTGCACCCCCTCCCAGTATGATTGCCGCCACATTCTTAGGGTTTGCCCGAC
                      ____________________________________________________________
consensus GTTGTGTCCCTGCACCCCCTCCCAGTATGATTGCCGCCACATTCTTAGGGTTTGCCCGAC
 
. : . : . : . : . : . :
JMSF035D17+ GCCTCTCCAATATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
JMSF033E07+ GCCTCTCCAATATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
JMSF046M10+ GCCTCTCCAATATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
JMSF043L18+ GCCTCTCCAATATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
JMSF016I24+ GAGAA
JMSF012C15+ ATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
JMSF034M03+ GCCTCTCCAATATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
                      ____________________________________________________________
consensus GCCTCTCCAATATCGGTGCTTCTACAGTCAGAGTTTCTGTCCCGTTCTCTCTTGTGAGAA
 
. : . : . : . : . : . :
JMSF035D17+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
JMSF033E07+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
JMSF046M10+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
JMSF043L18+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
JMSF016I24+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
JMSF012C15+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
JMSF034M03+ CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
                      ____________________________________________________________
consensus CAGAGAAAGCAACCCCAGGCTTGATCTTCCTCTTATTTTCTTCAAGTTTCAAACTTTTCC
 
. : . : . : . : . : . :
JMSF035D17+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
JMSF033E07+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
JMSF046M10+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
JMSF043L18+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
JMSF016I24+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
JMSF012C15+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
JMSF034M03+ TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
                      ____________________________________________________________
consensus TGGACTGATTGACCAAGACATTGTTGTTTACACTGCCTCTGATCTTCCCACCAAAAAACC
 
. : . : . : . : . : . :
JMSF035D17+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCAC
JMSF033E07+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF046M10+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF043L18+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF016I24+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF016C24+ TCAAAGTTGCACAAAACTCCATCACAGATC
JMSF001M03+ TCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF004P21+ TTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF012C15+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF005C08+ TTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
JMSF003M15+ ATCACAGATC
JMSF034M03+ CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
                      ____________________________________________________________
consensus CAGTCTCTCTTGGCAAATGAGCAGAAGATTTCAAAGTTGCACAAAACTCCATCACAGATC
 
. : . : . : . : . : . :
JMSF033E07+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF046M10+ ACTCC---CTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF043L18+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF016I24+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF016C24+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF001M03+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF004P21+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF012C15+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF005C08+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF003M15+ ACTCCNTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
JMSF034M03+ ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
                      ____________________________________________________________
consensus ACTCCCTACTAGAAGTTCACGAATAGGATCTGCAAAGCTAAAGCGCCAAGATGCGGTCCC
 
. : . : . : . : . : . :
JMSF033E07+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF046M10+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF043L18+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF016I24+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF016C24+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF001M03+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF004P21+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF012C15+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF005C08+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF003M15+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
JMSF034M03+ CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
                      ____________________________________________________________
consensus CAAACAAACAAGTGAAAATTCCTAGTACCCAGAAGTGAGAATCCAAGAAAAAAAAGGTGG
 
. : . : . : . : . : . :
JMSF033E07+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF046M10+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF043L18+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF016I24+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF016C24+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF001M03+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF004P21+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF012C15+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF005C08+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF003M15+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
JMSF034M03+ CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
                      ____________________________________________________________
consensus CAATTGCTGTGCACCCTTGAGCTCTTGCGCTTAAGAAAGGAAAAACAGAACTTCCCTTCT
 
. : . : . : . : . : . :
JMSF033E07+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTT
JMSF046M10+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCC
JMSF043L18+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCC
JMSF016I24+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCCC
JMSF016C24+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTG
JMSF001M03+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCC
JMSF004P21+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCCC
JMSF012C15+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCCC
JMSF005C08+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTT
JMSF003M15+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCCC
JMSF034M03+ ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCCACGAGAAATCTTCCAGTTCTTGA
                      ____________________________________________________________
consensus ATGCAACCGAGCTAGATGGTGGCTTCTCAGCTTTGCCCCGAGAAATCTTCCAGTTCTTGA
 
. : . : . : . : . : . :
JMSF034M03+ TATATATAGTGAGCTCGACAGTAAAAATTTCTGGGTAACGTACTCTCCCAAACTTCCATC
                      ____________________________________________________________
consensus TATATATAGTGAGCTCGACAGTAAAAATTTCTGGGTAACGTACTCTCCCAAACTTCCATC