| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN044H06 | Sequence | 603 | 013428 (4) | ref|XP_009626880.1| | 244 | PREDICTED: uncharacterized protein LOC104117521 [Nicotiana tomentosiformis] | |||||
| JMSF016O18 | Sequence | 291 | 007834 (7) | gb|EYU27512.1| | 1e-23 | hypothetical protein MIMGU_mgv1a018266mg [Erythranthe guttata] | 616 | 013428 (4) | ref|XP_009626880.1| | 245 | PREDICTED: uncharacterized protein LOC104117521 [Nicotiana tomentosiformis] |
| JMSF031J13 | Sequence | 665 | 013428 (4) | ref|XP_010551290.1| | 219 | PREDICTED: uncharacterized protein LOC104821956 [Tarenaya hassleriana] | 624 | 013428 (4) | ref|XP_010551290.1| | 219 | PREDICTED: uncharacterized protein LOC104821956 [Tarenaya hassleriana] |
This contig is upended
. : . : . : . : . : . :
JMFN044H06- GAGAG
rJMSF016O18+ TGCTTGGTGACGAGAGACAAACAAAATCACAGATTCNGAGAGAGAGAGAGAGAGAG
rJMSF031J13+ GAGAG
JMSF031J13- GAGAG
____________________________________________________________
consensus TGCTTGGTGACGAGAGACAAACAAAATCACAGATTCNGAGAGAGAGAGAGAGAGAG
. : . : . : . : . : . :
JMFN044H06- GGAGAGAGTGGTGCTCTAGCTCTTCTATGGCGACTGCCATTTGCTGTCGAGTTTCTCTTT
rJMSF016O18+ GGAGAGAGTGGTGCTCTAGCTCTTCTATGGCGACTGCCATTTGCTGTCGAGTTTCTCTTT
rJMSF031J13+ GGAGAGAGTGGTGCTCTAGCTCTTCTATGGCGACTGCCATTTGCTGTCGAGTTTCTCTTT
JMSF031J13- GGAGAGAGTGGTGCTCTAGCTCTTCTATGGCGACTGCCATTTGCTGTCGAGTTTCTCTTT
____________________________________________________________
consensus GGAGAGAGTGGTGCTCTAGCTCTTCTATGGCGACTGCCATTTGCTGTCGAGTTTCTCTTT
. : . : . : . : . : . :
JMFN044H06- CAGCCAATCATATCTTCCACCCTAAACCCGGAGATAAGAGCCACATTCAAAAACAATGGG
rJMSF016O18+ CAGCCAATCATATCTTCCACCCTAAACCCGGAGATAAGAGCCACATTCAAAAACAATGGG
rJMSF031J13+ CAGCCAATCATATCTTCCACCCTAAACCCGGAGATAAGAGCCACATTCAAAAACAATGGG
JMSF031J13- CAGCCAATCATATCTTCCACCCTAAACCCGGAGATAAGAGCCACATTCAAAAACAATGGG
____________________________________________________________
consensus CAGCCAATCATATCTTCCACCCTAAACCCGGAGATAAGAGCCACATTCAAAAACAATGGG
. : . : . : . : . : . :
JMFN044H06- CAAGCTGGAATGTAATGGCAATGCCGATTGCAGGAGCGGGAAAAGGTGGTGGGCTGTTGG
rJMSF016O18+ CAAGCTGGAATGTAATGGCAATGCCGATTGCAGGAGCGGGAAAAGGTGGTGGGCTGTTGG
rJMSF031J13+ CAAGCTGGAATGTAATGGCAATGCCGATTGCAGGA-CGGGAAAAGGTGGTGGGCTGTTGG
JMSF031J13- CAAGCTGGAATGTAATGGCAATGCCGATTGCAGGA-CGGGAAAAGGTGGTGGGCTGTTGG
____________________________________________________________
consensus CAAGCTGGAATGTAATGGCAATGCCGATTGCAGGAGCGGGAAAAGGTGGTGGGCTGTTGG
. : . : . : . : . : . :
JMFN044H06- ACAAGCCTGTAATAGAAAAAGCAACTCCTGGCCGTCAATCTGAGTTTGATTTGAGGAAAT
rJMSF016O18+ ACAAGCCTGTAATAGAAAAAGCAACTCCTGGCCGTCAATCTGAGTTTGATTTGAGGAAAT
rJMSF031J13+ ACAAGCCTGTAATAGAAAAAGCAACTCCTGGCCGTCAATCTGAGTTTGATTTGAGGAAAT
JMSF031J13- ACAAGCCTGTAATAGAAAAAGCAACTCCTGGCCGTCAATCTGAGTTTGATTTGAGGAAAT
____________________________________________________________
consensus ACAAGCCTGTAATAGAAAAAGCAACTCCTGGCCGTCAATCTGAGTTTGATTTGAGGAAAT
. : . : . : . : . : . :
JMFN044H06- CGAGGAAAACATCCCCACCATATCGTGTGCTGCTGCACAACGACAATTTCAACAAGAGGG
rJMSF016O18+ CGAGGAAAACATCCCCACCATATCGTGTGCTGCTGCACAACGACAATTTCAACAAGAGGG
rJMSF031J13+ CGAGGAAAACATCCCCACCATATCGTGTGCTGCTGCACAACGACAATTTCAACAAGAGGG
JMSF031J13- CGAGGAAAACATCCCCACCATATCGTGTGCTGCTGCACAACGACAATTTCAACAAGAGGG
____________________________________________________________
consensus CGAGGAAAACATCCCCACCATATCGTGTGCTGCTGCACAACGACAATTTCAACAAGAGGG
. : . : . : . : . : . :
JMFN044H06- AGTATGTTGTCCAAGTCCTTATGAAGGTCATACCAGGGATGACCCTTGACATTGCCGTAA
rJMSF016O18+ AGTATGTTGTCCAAGTCCTTATGAAGGTCATACCAGGGATGACCCTTGACATTGCCGTAA
rJMSF031J13+ AGTATGTTGTCCAAGTCCTTATGAAGGTCATACCAGGGATGACCCTTGACATTGCCGTAA
JMSF031J13- AGTATGTTGTCCAAGTCCTTATGAAGGTCATACCAGGGATGACCCTTGACATTGCCGTAA
____________________________________________________________
consensus AGTATGTTGTCCAAGTCCTTATGAAGGTCATACCAGGGATGACCCTTGACATTGCCGTAA
. : . : . : . : . : . :
JMFN044H06- ACATCATGCAAGAGGCACATCACAACGGCCTCTCGGTGGTCATAATCTGTGCGCAGGTTG
rJMSF016O18+ ACATCATGCAAGAGGCACATCACAACGGCCTCTCGGTGGTCATAATCTGTGCGCAGGTTG
rJMSF031J13+ ACATCATGCAAGAGGCACATCACAACGGCCTCTCGGTGGTCATAATCTGTGCGCAGGTTG
JMSF031J13- ACATCATGCAAGAGGCACATCACAACGGCCTCTCGGTGGTCATAATCTGTGCGCAGGTTG
____________________________________________________________
consensus ACATCATGCAAGAGGCACATCACAACGGCCTCTCGGTGGTCATAATCTGTGCGCAGGTTG
. : . : . : . : . : . :
JMFN044H06- ATGCAGAAGAGCATTGCACGCAGCTTAGAGGTAATGGCCTGTTGAGCTCAATTGAACCC
rJMSF016O18+ ATGCAGAAGAGCATTGCACGCAGCTTAGAGGTAATGGCCTGTTGAGCTCAATTGAACCCG
rJMSF031J13+ ATGCAGAAGAGCATTGCACGCAGCTTAGAGGTAATGGCCTGTTGAGCTCAATTGAACCC
JMSF031J13- ATGCAGAAGAGCATTGCACGCAGCTTAGAGGTAATGGCCTGTTGAGCTCAATTGAACCCG
____________________________________________________________
consensus ATGCAGAAGAGCATTGCACGCAGCTTAGAGGTAATGGCCTGTTGAGCTCAATTGAACCCG
. : . : . : . : . : . :
rJMSF016O18+ CCAGTGGCGGTGGTTGTTGAAGCGCACGAATCTCGTGTAGAAAATATAATCTGTATAACA
JMSF031J13- CCAGTGGCGGTGGTTGTTGAAGCGCACGAATCTCGTGTAGAAAATATAATCTGTATAACA
____________________________________________________________
consensus CCAGTGGCGGTGGTTGTTGAAGCGCACGAATCTCGTGTAGAAAATATAATCTGTATAACA
. : . : . : . : . : . :
rJMSF016O18+ TACTAGAGTTTACAC
JMSF031J13- TACTAGAGTTTACACATATATGTACATAGACGATGGGAATGAAATAGCTATGGAACTTTG
____________________________________________________________
consensus TACTAGAGTTTACACATATATGTACATAGACGATGGGAATGAAATAGCTATGGAACTTTG
. : . : . : . : . : . :
JMSF031J13- TTGAATGTTGGAACAGCAGATTGATCACCTGGCTGCCTTTGCTGCTGGGCAACTGGTGCA
____________________________________________________________
consensus TTGAATGTTGGAACAGCAGATTGATCACCTGGCTGCCTTTGCTGCTGGGCAACTGGTGCA