clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006A04 | Sequence | 460 | 013426 (7) | emb|CDP11579.1| | 2e-56 | unnamed protein product [Coffea canephora] | 830 | 013426 (7) | ref|XP_009757658.1| | 2e-84 | PREDICTED: probable glutathione S-transferase [Nicotiana sylvestris] |
JMFF022P22 | Sequence | 141 | 013426 (7) | ref|XP_008226266.1| | 4e-08 | PREDICTED: probable glutathione S-transferase parC [Prunus mume] | 798 | 013426 (7) | ref|XP_009757658.1| | 9e-84 | PREDICTED: probable glutathione S-transferase [Nicotiana sylvestris] |
JMFS106H01 | Sequence | 598 | 013426 (7) | ref|XP_004294220.1| | 7e-77 | PREDICTED: probable glutathione S-transferase [Fragaria vesca subsp. vesca] | |||||
JMSF031F21 | Sequence | 533 | 013426 (7) | emb|CDP11579.1| | 2e-57 | unnamed protein product [Coffea canephora] | 683 | 013426 (7) | ref|XP_009757658.1| | 6e-71 | PREDICTED: probable glutathione S-transferase [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF022P22- ATAATATCCATTATATTTAATTTTGAGAATTATCATATTC
rJMSF031F21- AATTTTGAGAATTATCATATTC
rJMFF006A04- ATTTTATTACACAATAATATCCATTATATTTAATTTTGAGAATTATCATATTC
____________________________________________________________
consensus ATTTTATTACACAATAATATCCATTATATTTAATTTTGAGAATTATCATATTC
. : . : . : . : . : . :
rJMFF022P22- TTCTTACATATGCTTAATTAATGCATCACAAAGTACATAATATGCTTATTTATGTATCTT
rJMSF031F21- TTCTTACATATGCTTAATTAATGCATCACAAAGTACATAATATGCTTATTTATGTATCTT
rJMFF006A04- TTCTTACATATGCTTAATTAATGCATCACAAAGTACATAATATGCTTATTTATGTATCTT
____________________________________________________________
consensus TTCTTACATATGCTTAATTAATGCATCACAAAGTACATAATATGCTTATTTATGTATCTT
. : . : . : . : . : . :
rJMFF022P22- TATCTTTGATTTGCCTTGTTCCTTGGAGATGCTCTAAGCAACGCCAATCCTTTCCCACAT
rJMSF031F21- TATCTTTGATTTGCCTTGTTCCTTGGAGATGCTCTAAGCAACGCCAATCCTTTCCCACAT
rJMFF006A04- TATCTTTGATTTGCCTTGTTCCTTGGAGATGCTCTAAGCAACGCCAATCCTTTCCCACAT
____________________________________________________________
consensus TATCTTTGATTTGCCTTGTTCCTTGGAGATGCTCTAAGCAACGCCAATCCTTTCCCACAT
. : . : . : . : . : . :
rJMFF022P22- CTGCAGAGTAAAGTCATAGACCTTCAAAGGGTCTGCAAGAGAGGTGGACACACTCTCATT
rJMSF031F21- CTGCAGAGTAAAGTCATAGACCTTCAAAGGGTCTGCAAGAGAGGTGGACACACTCTCATT
JMFS106H01+ AGAGGTGGACACACTCTCATT
rJMFF006A04- CTGCAGAGTAAAGTCATAGACCTTCAAAGGGTCTGCAAGAGAGGTGGACACACTCTCATT
____________________________________________________________
consensus CTGCAGAGTAAAGTCATAGACCTTCAAAGGGTCTGCAAGAGAGGTGGACACACTCTCATT
. : . : . : . : . : . :
rJMFF022P22- TTGCATGCATCTTTTGCCCCATTCACTCAACTTTGGAATTTCTGCATCCATGATCAACTC
rJMSF031F21- TTGCATGCATCTTTTGCCCCATTCACTCAACTTTGGAATTTCTGCATCCATGATCAACTC
JMFS106H01+ TTGCATGCATCTTTTGCCCCATTCACTCAACTTTGGAATTTCTGCATCCATGATCAACTC
rJMFF006A04- TTGCATGCATCTTTTGCCCCATTCACTCAACTTTGGAATTTCTGCATCCATGATCAACTC
____________________________________________________________
consensus TTGCATGCATCTTTTGCCCCATTCACTCAACTTTGGAATTTCTGCATCCATGATCAACTC
. : . : . : . : . : . :
rJMFF022P22- TACATCTTTCTCAAAAGTCAGCAGCCAAGTGTAGTATGAAACCAGAACCAAATCCAAGAA
rJMSF031F21- TACATCTTTCTCAAAAGTCAGCAGCCAAGTGTAGTATGAAACCAGAACCAAATCCAAGAA
JMFS106H01+ TACATCTTTCTCAAAAGTCAGCAGCCAAGTGTAGTATGAAACCAGAACCAAATCCAAGAA
rJMFF006A04- TACATCTTTCTCAAAAGTCAGCAGCCAAGTGTAGTATGAAACCAGAACCAAATCCAAGAA
JMSF031F21+ TCAAAAGTCAGCAGNCAAGNGTAGTANGAAACCAGAACCAAATCCAAGAA
____________________________________________________________
consensus TACATCTTTCTCAAAAGTCAGCAGCCAAGTGTAGTATGAAACCAGAACCAAATCCAAGAA
. : . : . : . : . : . :
rJMFF022P22- CCCAAT-CCTCTCCCCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
rJMSF031F21- CCCAAT-CCTCTCCCCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
JMFS106H01+ CCCAAT-CCTCTCCCCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
JMFF006A04+ CCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
rJMFF006A04- CCCAAT-CCTCTCCCCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
JMSF031F21+ CCCAATCCCTCTCCCCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
____________________________________________________________
consensus CCCAAT-CCTCTCCCCTCCATAATATGCCTCTTCCCCTAACTCCCTTTCCAACACCTTCA
. : . : . : . : . : . :
rJMFF022P22- GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
rJMSF031F21- GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
JMFS106H01+ GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
JMFF006A04+ GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
rJMFF006A04- GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
JMSF031F21+ GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
____________________________________________________________
consensus GGTTCTCCACCAGTTCTTCTTTAATGTCCTTTGTATCTTTGGTTTTAAACAGCCATGCCC
. : . : . : . : . : . :
rJMFF022P22- TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
rJMSF031F21- TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
JMFS106H01+ TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
JMFF006A04+ TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
rJMFF006A04- TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
JMSF031F21+ TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
____________________________________________________________
consensus TTATACAGTCATAGATCTTTTTGTCAATGAAATCAGCCCAGAACCTAGCTTGAGCTCTCT
. : . : . : . : . : . :
rJMFF022P22- TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
rJMSF031F21- TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
JMFS106H01+ TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
JMFF006A04+ TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
rJMFF006A04- TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
JMSF031F21+ TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
____________________________________________________________
consensus TGTAAGGATCCGAAGGCAACAATGGAAACTTGTCCTTCCAGACCTCATCGATGTACTCCA
. : . : . : . : . : . :
rJMFF022P22- GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
rJMSF031F21- GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
JMFS106H01+ GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
JMFF006A04+ GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
rJMFF006A04- GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
JMSF031F21+ GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
____________________________________________________________
consensus GAATGATGAGAGACTCGCAGACGGGTTTTCCGTTGTGAATGAGAACAGGGACCTTCTTGT
. : . : . : . : . : . :
rJMFF022P22- GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAAGTCTTCCTCTTTGGATT
rJMSF031F21- GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAGGTCTTCCTCTTNGGATT
JMFS106H01+ GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAAGTCTTCCTCTTTGGATT
JMFF006A04+ GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAAGTCTTCCTCTTTGGATT
JMFF022P22+ TGTTCCTCAAGTCTTCCTCTTTGGATT
rJMFF006A04- GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAAGTCTTCCTCTTTGGATT
JMSF031F21+ GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAAGTCTTCCTCTTTGGATT
____________________________________________________________
consensus GAACCGGGTTCATCTCCAGCAAGAGTGAGCTTTTGTTCCTCAAGTCTTCCTCTTTGGATT
. : . : . : . : . : . :
rJMFF022P22- CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
rJMSF031F21- CG
JMFS106H01+ CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
JMFF006A04+ CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
JMFF022P22+ CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
rJMFF006A04- CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
JMSF031F21+ CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
____________________________________________________________
consensus CGTAGTGAACCCCTTTGAGAGCGAGCGCCATTTTTGGCCTCATCGCGAACATGCTCACGT
. : . : . : . : . : . :
rJMFF022P22- GTAAATCCNATATAACAACCTTATCATCACCATCACTAG
JMFS106H01+ GTAAATCCAATATAACAACCTTATCATCACCATCACTA
JMFF006A04+ GTAAATCCAATATAACAACCTTATCATCACCATCACTAGCCATCTTTG
JMFF022P22+ GTAAATCCAATATAACAACCTTATCATCACCATCACTAGCCATCTTTG
rJMFF006A04- GTAAATCCAATATAACAACCTTATCATCACCATCACTAGCCATCTTTG
JMSF031F21+ GTAAATCCAATATAACAACCTTATCATCACCATCACTAGCCATCTTTGTGTTTCAATTCC
____________________________________________________________
consensus GTAAATCCAATATAACAACCTTATCATCACCATCACTAGCCATCTTTGTGTTTCAATTCC