Contig 013424:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014A08Sequence647013424 (4)gb|KDP23968.1|3e-79hypothetical protein JCGZ_25356 [Jatropha curcas]
JMFN018K18Sequence640013424 (4)gb|AID16035.1|2e-76putative universal stress protein [Catharanthus roseus]
JMSF031D13Sequence685013424 (4)gb|AID16035.1|7e-84putative universal stress protein [Catharanthus roseus]710013424 (4)gb|KDP23968.1|4e-86hypothetical protein JCGZ_25356 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF014A08-                                                             TCAGACCAC
                      ____________________________________________________________
consensus                                                                TCAGACCAC
 
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rJMFF014A08-          CAGATAGACAATTACACAGTCAGAACATTACAAAACAGACTGCATTTTAAACATAACAGA
rJMSF031D13-                          CAGTCAGAACATTACAAAACAGACTGCATTTTAAACATAACAGA
                      ____________________________________________________________
consensus             CAGATAGACAATTACACAGTCAGAACATTACAAAACAGACTGCATTTTAAACATAACAGA
 
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rJMFF014A08-          TAACAGAACCCAAAATGGTTGAAAAAGTTGGGAGAGAATGAGTAAACAAGACACTGTCAA
rJMSF031D13-          TAACAGAACCCAAAATGGTTGAAAAAGTTGGGAGAGAATGAGTAAACAAGACACTGTCAA
                      ____________________________________________________________
consensus             TAACAGAACCCAAAATGGTTGAAAAAGTTGGGAGAGAATGAGTAAACAAGACACTGTCAA
 
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rJMFF014A08-          TGCCATTTGATGTAAAGATTGCATTCTCGACCATGAAATCAGAACTCATATTTCTTGGCA
rJMSF031D13-          TGCCATTTGATGTAAAGATTGCATTCTCGACCATGAAATCAGAACTCATATTTCTTGGCA
                      ____________________________________________________________
consensus             TGCCATTTGATGTAAAGATTGCATTCTCGACCATGAAATCAGAACTCATATTTCTTGGCA
 
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rJMFF014A08-          TTTTAAGGGTGTTTTCTCATAGCGGCAAAAGCAGTACGGGGCAGGGAATGAATTCCGCGA
rJMSF031D13-          TTTTAAGGGTGTTTTCTCATAGCGGCAAAAGCAGTACGGGGCAGGGAATGAATTCCGCGA
JMFN018K18+                                                                     GA
JMSF031D13+                                              ACGGGGCAGGGAATGAATTCCGCGA
                      ____________________________________________________________
consensus             TTTTAAGGGTGTTTTCTCATAGCGGCAAAAGCAGTACGGGGCAGGGAATGAATTCCGCGA
 
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rJMFF014A08-          GCAGGTTTGCATCTACGTGTTTGGAGTGGATGGCATCCATGCTCAGCACAACCAAATCCA
rJMSF031D13-          GCAGGTTTGCATCTACGTGTTTGGAGTGGATGGCATCCATGCTCAGCACAACCAAATCCA
JMFN018K18+           GCAGGTTTGCATCTACGTGTTGGANGTGGATGGCATCCATGCTCAGCACAACCAAATCCA
JMSF031D13+           GCAGGTTTGCATCTACGTGTTTGGAGTGGATGGCATCCATGCTCAGCACAACCAAATCCA
                      ____________________________________________________________
consensus             GCAGGTTTGCATCTACGTGTTTGGAGTGGATGGCATCCATGCTCAGCACAACCAAATCCA
 
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rJMFF014A08-          AGTTCATCTCGTCAGCAATTTCACCGATGATAGCTGTGGGCTGGTTCCCTTCCCCTAATC
rJMSF031D13-          AGTTCATCTCGTCAGCAATTTCACCGATGATAGCTGTGGGCTGGTTCCCTTCCCCTAATC
JMFN018K18+           AGTTCATCTCGTCAGCAATTTCACCGATGATAGCTGTGGGCTGGTTCCCTTCCCCTAATC
JMSF031D13+           AGTTCATCTCGTCAGCAATTTCACCGATGATAGCTGTGGGCTGGTTCCCTTCCCCTAATC
                      ____________________________________________________________
consensus             AGTTCATCTCGTCAGCAATTTCACCGATGATAGCTGTGGGCTGGTTCCCTTCCCCTAATC
 
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rJMFF014A08-          GCTCCAGCAGCTTAAACTCCTGGAAGCCACCTTCAGATAAGTGCCAACGAATGCTTGAGA
rJMSF031D13-          GCTCCAGCAGCTTAAACTCCTGGAAGCCACCTTCAGATAAGTGCCAACGAATGCTTGAGA
JMFN018K18+           GCTCCAGCAGCTTAAACTCCTGGAAGCCGCCTTCAGATAAGTGCCAACGAATGCTTGAGA
JMSF031D13+           GCTCCAGCAGCTTAAACTCCTGGAAGCCACCTTCAGATAAGTGCCAACGAATGCTTGAGA
                      ____________________________________________________________
consensus             GCTCCAGCAGCTTAAACTCCTGGAAGCCACCTTCAGATAAGTGCCAACGAATGCTTGAGA
 
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rJMFF014A08-          GTTGGGTTTCATGTTGTGGCAGTGACGCTTTGTCATTTTCATCAATAACTACAACTGTTA
rJMSF031D13-          GTTGGGTTTCATGTTGTGGCAGTGACGCTTTGTCATTTTCATCAATAACTACAACTGTTA
JMFN018K18+           GTTGGGTTTCATGTTGTGGCAGTGACGCTTTGTCATTTTCATCAATAACTACAACTGTTA
JMSF031D13+           GTTGGGTTTCATGTTGTGGCAGTGACGCTTTGTCATTTTCATCAATAACTACAACTGTTA
                      ____________________________________________________________
consensus             GTTGGGTTTCATGTTGTGGCAGTGACGCTTTGTCATTTTCATCAATAACTACAACTGTTA
 
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rJMFF014A08-          TGTCCGCTCCATACTTCTTCGCCAAAGCAGCAGTAGTAGCCGCAGCCTGTCTTGTACCCT
rJMSF031D13-          TGTCCGCTCCATACTTCTTCGCCAAAGCAGCAGTAGTAGCCGCAGCCTGTCTTGTACCCT
JMFN018K18+           TGTCCGCTCCATACTTCTTCGCCAAAGCAGCAGTAGTAGCCGCAGCCTGTCTTGTACCCT
JMSF031D13+           TGTCCGCTCCATACTTCTTCGCCAAAGCAGCAGTAGTAGCCGCAGCCTGTCTTGTACCCT
                      ____________________________________________________________
consensus             TGTCCGCTCCATACTTCTTCGCCAAAGCAGCAGTAGTAGCCGCAGCCTGTCTTGTACCCT
 
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rJMFF014A08-          CAGAGAGATAAGGGTTTCGATCGGTGATTGGTAAGAGTAGATGCTTGAAATTAGTAAAGG
rJMSF031D13-          CAGAGAGATAAGGGTTTCGATCGGTGATTGGTAAGAGTAGATGCTTGAAATTAGTAAAGG
JMFN018K18+           CAGAGAGATAAGGGTTTCGATCGGTGATTGGTAAGAGTAGATGCTTGAAATTAGTAAAGG
JMSF031D13+           CAGAGAGATAAGGGTTTCGATCGGTGATTGGTAAGAGTAGATGCTTGAAATTAGTAAAGG
                      ____________________________________________________________
consensus             CAGAGAGATAAGGGTTTCGATCGGTGATTGGTAAGAGTAGATGCTTGAAATTAGTAAAGG
 
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rJMFF014A08-          CATCTGCAGCTGAAGTGGCCTCTGATACTTGGGCCTTA                      
rJMSF031D13-          CATCTGCAGCTGAAGTGGCCTCTGATACTTGGGCCTTAGCTTTTACTGTTTGCCCAATTC
JMFN018K18+           CATCTGCAGCTGAAGTGGCCTCTGATACTTGGGCCTTAGCTTTTACTGTTTGCCCAATTC
JMSF031D13+           CATCTGCAGCTGAAGTGGCCTCTGATACTTGGGCCTTAGCTTTTACTGTTTGCCCAATTC
                      ____________________________________________________________
consensus             CATCTGCAGCTGAAGTGGCCTCTGATACTTGGGCCTTAGCTTTTACTGTTTGCCCAATTC
 
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rJMSF031D13-          GATAGAGTTTGGGAAGGAATGTAAGATTGCGAGACTTTAACTTAAGCAAGGAATTGGACA
JMFN018K18+           GATAGAGTTTGGGAAGGAATGTAAGATTGCGAGACTTTAACTTAAGCAAGGAATTGGACA
JMSF031D13+           GATAGAGTTTGGGAAGGAATGTAAGATTGCGAGACTTTAACTTAAGCAAGGAATTGGACA
                      ____________________________________________________________
consensus             GATAGAGTTTGGGAAGGAATGTAAGATTGCGAGACTTTAACTTAAGCAAGGAATTGGACA
 
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rJMSF031D13-          GAGAAG                                                      
JMFN018K18+           GAGAAGAAGAGAAGGATGGGGTTAGAATTGAGGTTCGAGAATGGAGTTTTGAGGTTTTAA
JMSF031D13+           GAGAAGAAGAGAAGGATGGGGTTAGAATTGAGGTTCGAGAATGGAGTTTTGAGGTTTTAA
                      ____________________________________________________________
consensus             GAGAAGAAGAGAAGGATGGGGTTAGAATTGAGGTTCGAGAATGGAGTTTTGAGGTTTTAA
 
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JMFN018K18+           CTGACGGAGAAACTGCAACTAAGTAGTGAGCAAATGCCATGGAAGAGCCCTCCGCCGGCA
JMSF031D13+           CTGACGGAGAAACTGCAACTAAGTAGTGAGCAAATGCCATGGAAGAGCCCTCCGCCGGCA
                      ____________________________________________________________
consensus             CTGACGGAGAAACTGCAACTAAGTAGTGAGCAAATGCCATGGAAGAGCCCTCCGCCGGCA
 
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JMFN018K18+           ACTTTCTCTCTCTATTTCTTGATTTTCTGGTGTCTGGA                      
JMSF031D13+           ACTTTCTCTCTCTATTTCTTGATTTTCTGGTGTCTGGACTGGTGTGATCCAGAAGACGCC
                      ____________________________________________________________
consensus             ACTTTCTCTCTCTATTTCTTGATTTTCTGGTGTCTGGACTGGTGTGATCCAGAAGACGCC