Contig 013411:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029L11Sequence584013411 (2)gb|ACG30677.1|9e-50histone H4 [Zea mays]535013411 (2)gb|ACG30677.1|5e-50histone H4 [Zea mays]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF029L11+ CGGCAATCAAAAATCTTCGAAGTTCAGATTTCCTTAGCTTAGAA
JMSF029L11- TCAGATTTCCTTAGCTTAGAA
                      ____________________________________________________________
consensus CGGCAATCAAAAATCTTCGAAGTTCAGATTTCCTTAGCTTAGAA
 
. : . : . : . : . : . :
rJMSF029L11+ GAGAAGTACTTTCTGAAGATGTCTGGGCGTGGAAAGGGCGGTAAGGGTTTGGGAAAGGGA
JMSF029L11- GAGAAGTACTTTCTGAAGATGTCTGGGCGTGGAAAGGGCGGTAAGGGTTTGGGAAAGGGA
                      ____________________________________________________________
consensus GAGAAGTACTTTCTGAAGATGTCTGGGCGTGGAAAGGGCGGTAAGGGTTTGGGAAAGGGA
 
. : . : . : . : . : . :
rJMSF029L11+ GGAGCGAAACGACACCGTAAGGTCCTCCGGGACAACATCCAAGGCATCACGAAGCCGGCC
JMSF029L11- GGAGCGAAACGACACCGTAAGGTCCTCCGGGACAACATCCAAGGCATCACGAAGCCGGCC
                      ____________________________________________________________
consensus GGAGCGAAACGACACCGTAAGGTCCTCCGGGACAACATCCAAGGCATCACGAAGCCGGCC
 
. : . : . : . : . : . :
rJMSF029L11+ ATTCGCCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCCGGTCTCATCTACGAGGAG
JMSF029L11- ATTCGCCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCCGGTCTCATCTACGAGGAG
                      ____________________________________________________________
consensus ATTCGCCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATCTCCGGTCTCATCTACGAGGAG
 
. : . : . : . : . : . :
rJMSF029L11+ ACTCGCGGCGTCCTCAAGATCTTCCTTGAGAATGTCATCCGCGATGCTGTTACCTACACC
JMSF029L11- ACTCGCGGCGTCCTCAAGATCTTCCTTGAGAATGTCATCCGCGATGCTGTTACCTACACC
                      ____________________________________________________________
consensus ACTCGCGGCGTCCTCAAGATCTTCCTTGAGAATGTCATCCGCGATGCTGTTACCTACACC
 
. : . : . : . : . : . :
rJMSF029L11+ GAGCACGCTCGCCGGAAGACGGTCACCGCAATGGACGTCGTCTATGCTCTCAAGAGACAG
JMSF029L11- GAGCACGCTCGCCGGAAGACGGTCACCGCAATGGACGTCGTCTATGCTCTCAAGAGACAG
                      ____________________________________________________________
consensus GAGCACGCTCGCCGGAAGACGGTCACCGCAATGGACGTCGTCTATGCTCTCAAGAGACAG
 
. : . : . : . : . : . :
rJMSF029L11+ GGCCGCACCCTGTACGGATTCGGCGGTTAGCTTTTCTTATCGGCGGTGTATATTTTGGTG
JMSF029L11- GGCCGCACCCTGTACGGATTCGGCGGTTAGCTTTTCTTATCGGCGGTGTATATTTTGGTG
                      ____________________________________________________________
consensus GGCCGCACCCTGTACGGATTCGGCGGTTAGCTTTTCTTATCGGCGGTGTATATTTTGGTG
 
. : . : . : . : . : . :
JMSF029L11- TTCTATTCTGAATCAATCTCAGATTTATTGTGACAATGTTACTCTGATTTCAATTCAATG
                      ____________________________________________________________
consensus TTCTATTCTGAATCAATCTCAGATTTATTGTGACAATGTTACTCTGATTTCAATTCAATG
 
. : . : . : . : . : . :
JMSF029L11- AATTTCAGTTCTTATGAATTCTCAATTTTCTTAATTTTATATCTTCTATTTGACTCTTCG
                      ____________________________________________________________
consensus AATTTCAGTTCTTATGAATTCTCAATTTTCTTAATTTTATATCTTCTATTTGACTCTTCG
 
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JMSF029L11- TTGCAATTCGTAATATTTGTAAAATGGTTTATGAAAAGTTTGTTCAAAGGAAAAAAAAAA
                      ____________________________________________________________
consensus TTGCAATTCGTAATATTTGTAAAATGGTTTATGAAAAGTTTGTTCAAAGGAAAAAAAAAA