Contig 013410:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029K22Sequence663013410 (2)ref|XP_010258809.1|2e-33PREDICTED: ceramide kinase-like isoform X1 [Nelumbo nucifera]750000318 (3)ref|XP_010320731.1|2e-82PREDICTED: ceramide kinase isoform X3 [Solanum lycopersicum]
JMSF049M12Sequence601013410 (2)ref|XP_010258809.1|6e-39PREDICTED: ceramide kinase-like isoform X1 [Nelumbo nucifera]816000318 (3)ref|XP_010320731.1|1e-99PREDICTED: ceramide kinase isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049M12+ CTGATTAACCCACATCTGGCACGTCCGC
JMSF029K22+ CCGC
                      ____________________________________________________________
consensus CTGATTAACCCACATCTGGCACGTCCGC
 
. : . : . : . : . : . :
JMSF049M12+ AGGTCCTTATGGCCAAAACAATACTGCGATGGGATCCAAACAGTAGGGTGGTTTCTTGAC
JMSF029K22+ AGGTCCTTATGGCCAAAACAATACTGCGATGGGATCCAAACAGTAGGGTGGTTTCTTGAC
                      ____________________________________________________________
consensus AGGTCCTTATGGCCAAAACAATACTGCGATGGGATCCAAACAGTAGGGTGGTTTCTTGAC
 
. : . : . : . : . : . :
JMSF049M12+ TTTTGAATATAGTGTACAGCAAACCTATACATCTCAAATGAGTAGCCAGAGAATAGTCCA
JMSF029K22+ TTTTGAATATAGTGTACAGCAAACCTATACATCTCAAATGAGTAGCCNGAGAATAGTCCA
                      ____________________________________________________________
consensus TTTTGAATATAGTGTACAGCAAACCTATACATCTCAAATGAGTAGCCAGAGAATAGTCCA
 
. : . : . : . : . : . :
JMSF049M12+ CTAGCATTTGGAAGCGAAGATTCACGAACCAAACCCCAACCAAGAGAGTCAATGGCATAG
JMSF029K22+ CTNGCATTTGGAAGCGAAGATTCACGAACCAAACCCCAACCAAGNGAGTCAATGGCATAG
                      ____________________________________________________________
consensus CTAGCATTTGGAAGCGAAGATTCACGAACCAAACCCCAACCAAGAGAGTCAATGGCATAG
 
. : . : . : . : . : . :
JMSF049M12+ ACATCACATAATTTCACAGAAATTTCGCATTTGCGGAAAATTTTTAAGCCTAAACAAAGG
JMSF029K22+ ACATCACATAATTTCACAGAAATTTCGCATTTGCGGAAAATTTTTAAGCCTAAACAAAGG
                      ____________________________________________________________
consensus ACATCACATAATTTCACAGAAATTTCGCATTTGCGGAAAATTTTTAAGCCTAAACAAAGG
 
. : . : . : . : . : . :
JMSF049M12+ GATGGATCATCCTCGTTAGAAACAGATTCAGCTGATNTACAAGACAACCCGTCGGAATTA
JMSF029K22+ GATGGATCATCCTCGTTAGAAACAGATTCAGCTGATNTACAAGACAACCCGTCGGAATTA
                      ____________________________________________________________
consensus GATGGATCATCCTCGTTAGAAACAGATTCAGCTGATNTACAAGACAACCCGTCGGAATTA
 
. : . : . : . : . : . :
JMSF049M12+ AGGGTGACAACAACCTCTCCAACGCCATCCAAGAAGAGATTTGAGCTCAAGATTGAGCTT
JMSF029K22+ AGGGTGACAACAACCTNTCCAACGCCATCCAAGAAGAGATTTGAGCTCAAGATTGAGCTT
                      ____________________________________________________________
consensus AGGGTGACAACAACCTCTCCAACGCCATCCAAGAAGAGATTTGAGCTCAAGATTGAGCTT
 
. : . : . : . : . : . :
JMSF049M12+ TGGGAATCATTATCAGCAATTGGGCGAGAATTTTCATCTCCTCCCGGTAATGAATCATCG
JMSF029K22+ TGGGAATCATTATCAGCAATTGGGCGAGAATTTTCATCTCCTCCCGGTAATGAATCATCG
                      ____________________________________________________________
consensus TGGGAATCATTATCAGCAATTGGGCGAGAATTTTCATCTCCTCCCGGTAATGAATCATCG
 
. : . : . : . : . : . :
JMSF049M12+ CACCTCTCCATAATTTGGAATAGTATATATATTTTTTTTCTATTTTTTTTCTATTTTTCT
JMSF029K22+ CACCTCTCCATAATTTGGAATAGTATATATATTTTTTTTCTATTTTTTTT-TATTTTTCT
                      ____________________________________________________________
consensus CACCTCTCCATAATTTGGAATAGTATATATATTTTTTTTCTATTTTTTTTCTATTTTTCT
 
. : . : . : . : . : . :
JMSF049M12+ TCAGATAAATATCTGGATTTTATTTGAGCAGAAAATCCTACCCAGTTTCGAGAAACATAA
JMSF029K22+ TCAGATAAATATCTGGATTTTATTTGAGCAGAAAATCCTACCCAGTTTCGAGAAACATAA
                      ____________________________________________________________
consensus TCAGATAAATATCTGGATTTTATTTGAGCAGAAAATCCTACCCAGTTTCGAGAAACATAA
 
. : . : . : . : . : . :
JMSF049M12+ AAAAAAAGGGGGAAAAATCTGATTGTTAAC
JMSF029K22+ AAAAAAAGGGGGAAAAATCTGATTGTTAACGAGAAAGTGAGAAATCGAGTTGGATATTGG
                      ____________________________________________________________
consensus AAAAAAAGGGGGAAAAATCTGATTGTTAACGAGAAAGTGAGAAATCGAGTTGGATATTGG
 
. : . : . : . : . : . :
JMSF029K22+ GTAAAGCCATAAGGGGATCTTAGCAGACGTGAATCTCGTCAAAACCCAACAACTAAACCC
                      ____________________________________________________________
consensus GTAAAGCCATAAGGGGATCTTAGCAGACGTGAATCTCGTCAAAACCCAACAACTAAACCC