Contig 013406:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029E16Sequence701013406 (2)780013406 (2)

Alignment

This contig is upended


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rJMSF029E16-                                  GTATGAGACTGTGGTCTAAAGTGGGCAAATTCTTTA
                      ____________________________________________________________
consensus                                     GTATGAGACTGTGGTCTAAAGTGGGCAAATTCTTTA
 
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rJMSF029E16-          AGCACACCAACATTTATCTCTATCTGCTTAGCCATTGATAACATTGTTAAATTGATGATA
                      ____________________________________________________________
consensus             AGCACACCAACATTTATCTCTATCTGCTTAGCCATTGATAACATTGTTAAATTGATGATA
 
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rJMSF029E16-          CTTAGGTTGCCGCTGCAGCAGTGAAGACAAATGTCATATGAACTTGTTCAAACAACGATA
                      ____________________________________________________________
consensus             CTTAGGTTGCCGCTGCAGCAGTGAAGACAAATGTCATATGAACTTGTTCAAACAACGATA
 
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rJMSF029E16-          ACAGCGCCCAGGAATGGAGACGTTGTCGTTGAGCGTTTGGTTTCTTTAATTTGCCGGTTA
                      ____________________________________________________________
consensus             ACAGCGCCCAGGAATGGAGACGTTGTCGTTGAGCGTTTGGTTTCTTTAATTTGCCGGTTA
 
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rJMSF029E16-          AGCGTTCCAATCCTTTTCTGCTCCTCCCTGCTCGCGAAACCTTAGCCAAGATCCGTTCTT
                      ____________________________________________________________
consensus             AGCGTTCCAATCCTTTTCTGCTCCTCCCTGCTCGCGAAACCTTAGCCAAGATCCGTTCTT
 
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rJMSF029E16-          GTCGTCAACTATAAACTGCTTTGAAAACAAGATAGCCAAACAGCATATATTACGGCAGTA
                      ____________________________________________________________
consensus             GTCGTCAACTATAAACTGCTTTGAAAACAAGATAGCCAAACAGCATATATTACGGCAGTA
 
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rJMSF029E16-          AAACTAAACAAATATGAGTTTCAACCGCATAAGTAATGGCGAAAACCCTAATTTTAACCA
JMSF029E16+                              TTCAACCGCATAAGTAATGGCGAAAACCCTNATTTTAACCA
                      ____________________________________________________________
consensus             AAACTAAACAAATATGAGTTTCAACCGCATAAGTAATGGCGAAAACCCTAATTTTAACCA
 
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rJMSF029E16-          ATGAAAAACCCTTTCTCCAGCCTTCAAGATTAATATGCAGAAATAATTGAAACTTAATTA
JMSF029E16+           ATGAAAAACCCTTTCTCCAGCCTTCAAGATTAATATGCAGAAATAATTGAAACTTAATTA
                      ____________________________________________________________
consensus             ATGAAAAACCCTTTCTCCAGCCTTCAAGATTAATATGCAGAAATAATTGAAACTTAATTA
 
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rJMSF029E16-          TACGTATATGTGTGTATTTATATATGTAACTGGCAAACACCAACAAATTAAACCAAACCA
JMSF029E16+           TACGTATATGTGTGTATTTATATATGTAACTGGCAAACACCAACAAATTAAACCAAACCA
                      ____________________________________________________________
consensus             TACGTATATGTGTGTATTTATATATGTAACTGGCAAACACCAACAAATTAAACCAAACCA
 
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rJMSF029E16-          AATAGAATCTGGCTGGGCAGATCGATTAGTGTGGAAAAGGGAACAAAGAATCTGCAGAAA
JMSF029E16+           AATAGAATCTGGCTGGGCAGATCGATTAGTGTGGAAAAGGGAACAAAGAATCTGCAGAAA
                      ____________________________________________________________
consensus             AATAGAATCTGGCTGGGCAGATCGATTAGTGTGGAAAAGGGAACAAAGAATCTGCAGAAA
 
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rJMSF029E16-          CTTAGCAAAGAGACAGATATTAAAGGTAAAAATAAGTGCAATAAACAGAAAAATAAAATT
JMSF029E16+           CTTAGCAAAGAGACAGATATTAAAGGTAAAAATAAGTGCAATAAACAGAAAAATAAAATT
                      ____________________________________________________________
consensus             CTTAGCAAAGAGACAGATATTAAAGGTAAAAATAAGTGCAATAAACAGAAAAATAAAATT
 
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rJMSF029E16-          AAAGGTTAAAAAGGGAGCTCCCTTCAGTCCAAGTACAGGAAGCTTAAGATCCAACTTGTC
JMSF029E16+           AAAGGTTAAAAAGGGAGCTCCCTTCAGTCCAAGTACAGGAAGCTTAAGATCCAACTTGTC
                      ____________________________________________________________
consensus             AAAGGTTAAAAAGGGAGCTCCCTTCAGTCCAAGTACAGGAAGCTTAAGATCCAACTTGTC
 
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rJMSF029E16-          TCCCGCATCATTCACTCAGTTACTGAGACAGTGTTCATTAGTCATCANGGCCGGGTTCAT
JMSF029E16+           TCCCGCATCATTCACTCAGTTACTGAGACAGTGTTCATTAGTCATCAAGGCCGGGTTCAT
                      ____________________________________________________________
consensus             TCCCGCATCATTCACTCAGTTACTGAGACAGTGTTCATTAGTCATCAAGGCCGGGTTCAT
 
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rJMSF029E16-          CGTCATCTCATCTCAGCATTTGGA                                    
JMSF029E16+           CGTCATCTCATCTCAGCATTTGGATGAATGAGTCGGAAGCTAATTGAATCCTACTGCCAC
                      ____________________________________________________________
consensus             CGTCATCTCATCTCAGCATTTGGATGAATGAGTCGGAAGCTAATTGAATCCTACTGCCAC
 
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JMSF029E16+           CCATGTTTGGACTGAAGAAAGCTCTCTTCTTTTTTCTTTTTATAATTTTTATTACACCAC
                      ____________________________________________________________
consensus             CCATGTTTGGACTGAAGAAAGCTCTCTTCTTTTTTCTTTTTATAATTTTTATTACACCAC
 
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JMSF029E16+           ACTCAAACATGCACATATATAAACCTCGAACAGAAATTAAGAAAAAAATGGTTGGTGGGT
                      ____________________________________________________________
consensus             ACTCAAACATGCACATATATAAACCTCGAACAGAAATTAAGAAAAAAATGGTTGGTGGGT
 
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JMSF029E16+           GAAACCACATAGGATGTTAATGAAAGAAATAAACAATAATCATAAGATTTCTTTGCAGCA
                      ____________________________________________________________
consensus             GAAACCACATAGGATGTTAATGAAAGAAATAAACAATAATCATAAGATTTCTTTGCAGCA
 
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JMSF029E16+           GAAAGAGGCAAAGGCTGCGATAATGAGAAGATGAGAATGAAAGGTTGCTTAATCGCAGTC
                      ____________________________________________________________
consensus             GAAAGAGGCAAAGGCTGCGATAATGAGAAGATGAGAATGAAAGGTTGCTTAATCGCAGTC