Contig 013403:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF029B24+                                                                   AGCT
                      ____________________________________________________________
consensus                                                                     AGCT
 
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JMSF029B24+           TAAGGAAAATAACAGAAACGAAAACTCTATATAAAAACACAGCACCCATATTTAATTTGA
                      ____________________________________________________________
consensus             TAAGGAAAATAACAGAAACGAAAACTCTATATAAAAACACAGCACCCATATTTAATTTGA
 
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JMFS007D11+                                                                   GATT
JMFS051F07+                                                                   GATT
JMSF029B24+           ACATATGTGCAAAAGCAAGAAGAATGAAAATACAAATAAAAGTAGTGAAAGGATATGATT
                      ____________________________________________________________
consensus             ACATATGTGCAAAAGCAAGAAGAATGAAAATACAAATAAAAGTAGTGAAAGGATATGATT
 
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JMFS007D11+           TCAGTCTTCCCATAAAAATCTCCATGAATGAATCCAGAGTCCATGTTTTCTTCTCTGACC
JMFS051F07+           TCAGTCTTCCCATAAAAATCTCCATGAATGAATCCAGAGTCCATGTTTTCTTCTCTGACC
JMSF029B24+           TCAGTCTTCCCATAAAAATCTCCATGAATGAATCCAGAGTCCATGTTTTCTTCTCTGACC
                      ____________________________________________________________
consensus             TCAGTCTTCCCATAAAAATCTCCATGAATGAATCCAGAGTCCATGTTTTCTTCTCTGACC
 
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JMFS007D11+           TCCCCTCGTCGAGAATTTTCTCAACCAAATGCTCAATCCTTAGTATTCTACCAACAATTG
JMFS051F07+           TCCCCTCGTCGAGAATTTTCTCAACCAAATGCTCAATCCTTAGTATTCTACCAACAATTG
JMSF029B24+           TCCCCTCGTCGAGAATTTTCTCAACCAAATGCTCAATCCTTAGTATTCTACCAACAATTG
                      ____________________________________________________________
consensus             TCCCCTCGTCGAGAATTTTCTCAACCAAATGCTCAATCCTTAGTATTCTACCAACAATTG
 
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JMFS007D11+           GTACAAAATTCTTGTGCCACTCAACTTCATTCTTCATGTCCAAGTCGAGCCCATCATCAA
JMFS051F07+           GTACAAAATTCTTGTGCCACTCAACTTCATTCTTCATGTCCAAGTCGAGCCCATCATCAA
JMSF029B24+           GTACAAAATTCTTGTGCCACTCAACTTCATTCTTCATGTCCAAGTCGAGCCCATCATCAA
                      ____________________________________________________________
consensus             GTACAAAATTCTTGTGCCACTCAACTTCATTCTTCATGTCCAAGTCGAGCCCATCATCAA
 
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JMFS007D11+           TAAGCAAAACAGAAATGCCTGCAGCTTTGAAGCACAGGGCAGTGGTCTCTTCCAATTTAT
JMFS051F07+           TAAGCAAAACAGAAATGCCTGCAGCTTTGAAGCACAGGGCAGTGGTCTCTTCCAATTTAT
JMSF029B24+           TAAGCAAAACAGAAATGCCTGCAGCTTTGAAGCACAGGGCAGTGGTCTCTTCCAATTTAT
                      ____________________________________________________________
consensus             TAAGCAAAACAGAAATGCCTGCAGCTTTGAAGCACAGGGCAGTGGTCTCTTCCAATTTAT
 
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JMFS007D11+           GGGTAGAGCGATATTCTTGAATGGCATGTAGAGATAAGTTTGAGCCATATAATTCAGCAA
JMFS051F07+           GGGTAGAGCGATATTCTTGAATGGCATGTAGAGATAAGTTTGAGCCATATAATTCAGCAA
JMSF029B24+           GGGTAGAGCGATATTCTTGAATGGCATGTAGAGATAAGTTTGAGCCATATAATTCAGCAA
                      ____________________________________________________________
consensus             GGGTAGAGCGATATTCTTGAATGGCATGTAGAGATAAGTTTGAGCCATATAATTCAGCAA
 
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JMFS007D11+           TTTCCCTTATGCTTCTTTTGAAATTGATGGTATGTACGGCGGAGGACAAGGCGTCGCCGG
JMFS051F07+           TTTCCCTTATGCTTCTTTTGAAATTGATGGTATGTACGGCGGAGGACAAGGCGTCGCCGG
JMSF029B24+           TTTCCCTTATGCTTCTTTTGAAATTGATGGTATGTACGGCGGAGGACAAGGCGTCGCCGG
                      ____________________________________________________________
consensus             TTTCCCTTATGCTTCTTTTGAAATTGATGGTATGTACGGCGGAGGACAAGGCGTCGCCGG
 
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JMFS007D11+           TGGCTTCAGAGAAGCAGTTGAGAAAAGGGATTTTGGAGTGAAGGCTGACTATGTTGTGAG
JMFS051F07+           TGGCTTCAGAGAAGCAGTTGAGAAAAGGGATTTTGGAGTGAAGGCTGACTATGTTGTGAG
JMSF029B24+           TGGCTTCAGAGAAGCAGTTGAGAAAAGGGATTTTGGAGTGAAGGCTGACTATGTTGTGAG
                      ____________________________________________________________
consensus             TGGCTTCAGAGAAGCAGTTGAGAAAAGGGATTTTGGAGTGAAGGCTGACTATGTTGTGAG
 
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JMFS007D11+           CATGAGCATCCACCAACTTCACCTTCTCCACTGCTTCTTTCAGCTCAGCAAAGCCTTCCA
JMFS051F07+           CATGAGCATCCACCAACTTCACCTTCTCCACTGCTTCTTTCAGCTCAGCAAAGCCTTCCA
JMSF029B24+           CATGAGCATCCACCAACTTCACCTTCTCCACTGCTTCTTTCAGCTCAGCAAAGCCTTCCA
                      ____________________________________________________________
consensus             CATGAGCATCCACCAACTTCACCTTCTCCACTGCTTCTTTCAGCTCAGCAAAGCCTTCCA
 
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JMFS007D11+           TTTTCCCTCTCTGCAGCTCGATAGGACCTCCCTCGTTTCCGAGTTCACCTAGA       
JMFS051F07+           TTTTCCCTCTCTGCAGCTCGATAGGACCTCCC                            
JMSF029B24+           TTTTCCCTCTCTGCAGCTCGATAGGACCTCCCTCGTTTCCGAGTTCACCTAGATAGAGCC
                      ____________________________________________________________
consensus             TTTTCCCTCTCTGCAGCTCGATAGGACCTCCCTCGTTTCCGAGTTCACCTAGATAGAGCC