Contig 013390:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026N14Sequence647013390 (3)ref|XP_010526854.1|5e-82PREDICTED: SRSF protein kinase 2-like [Tarenaya hassleriana]741018231ref|XP_009588851.1|4e-43PREDICTED: SRSF protein kinase 1 [Nicotiana tomentosiformis]
JMSF029E05Sequence639013390 (3)ref|XP_010526854.1|4e-82PREDICTED: SRSF protein kinase 2-like [Tarenaya hassleriana]735011342 (2)
JMSF041L09Sequence770013390 (3)emb|CDP01781.1|9e-111unnamed protein product [Coffea canephora]818011342 (2)

Alignment

This contig is upended


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JMSF041L09+                  GAAGAATGGGGGTATTTCCAGATTTTATTGGATCTTTGGCAGGATTAATGGTG
                      ____________________________________________________________
consensus                    GAAGAATGGGGGTATTTCCAGATTTTATTGGATCTTTGGCAGGATTAATGGTG
 
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JMSF041L09+           GAACAGAGCAGGATATTTTCAAGTTTTAGGTCTGTATGTATAATTCCAAGTACTCTATGC
                      ____________________________________________________________
consensus             GAACAGAGCAGGATATTTTCAAGTTTTAGGTCTGTATGTATAATTCCAAGTACTCTATGC
 
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JMSF029E05+                        CAGTCAAAATGCACTTGCATATTTCTCTAACTTTGTTTAACTCAAGG
JMSF041L09+           AAATAATCTAGGCCAGTCAAAATGCACTTGCATATTTCTCTAACTTTGTTTAACTCAAGG
JMSF026N14+                        CAGTCAAAATGCACTTGCATATTTCTCTAACTTTGTTTAACTCAAGG
                      ____________________________________________________________
consensus             AAATAATCTAGGCCAGTCAAAATGCACTTGCATATTTCTCTAACTTTGTTTAACTCAAGG
 
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JMSF029E05+           CCTTTATGATGGTTATATCTGATCAGTCGCAACAAACTATCACCAAGAAATTCAAGAACC
JMSF041L09+           CCTTTATGATGGTTATATCTGATCAGTCGCAACAAACTATCACCAAGAAATTCAAGAACC
JMSF026N14+           CCTTTATGATGGTTATATCTGATCAGTCGCAACAAACTATCACCAAGAAATTCAAGAACC
                      ____________________________________________________________
consensus             CCTTTATGATGGTTATATCTGATCAGTCGCAACAAACTATCACCAAGAAATTCAAGAACC
 
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JMSF029E05+           ATGCAGAGATGCTGTCCATTTGGGCCTGTGTGCTTAAAATGGTCAATTAACCGTATAACA
JMSF041L09+           ATGCAGAGATGCTGTCCATTTGGGCCTGTGTGCTTAAAATGGTCAATTAACCGTATAACA
JMSF026N14+           ATGCAGAGATGCTGTCCATTTGGGCCTGTGTGCTTAAAATGGTCAATTAACCGTATAACA
                      ____________________________________________________________
consensus             ATGCAGAGATGCTGTCCATTTGGGCCTGTGTGCTTAAAATGGTCAATTAACCGTATAACA
 
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JMSF029E05+           CAATTATTATTGGAGGGATCACCATCAGCAATAGCAGAGAGGATTTCAATTTCATGGAGA
JMSF041L09+           CAATTATTATTGGAGGGATCACCATCAGCAATAGCAGAGAGGATTTCAATTTCATGGAGA
JMSF026N14+           CAATTATTATTGGAGGGATCACCATCAGCAATAGCAGAGAGGATTTCAATTTCATGGAGA
                      ____________________________________________________________
consensus             CAATTATTATTGGAGGGATCACCATCAGCAATAGCAGAGAGGATTTCAATTTCATGGAGA
 
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JMSF029E05+           GCAGCTTGAGCAAATTGTGGTGCACTCTTCTGAATCTTCAAAGCTACATATGTTGATGCT
JMSF041L09+           GCAGCTTGAGCAAATTGTGGTGCACTCTTCTGAATCTTCAAAGCTACATATGTTGATGCT
JMSF026N14+           GCAGCTTGAGCAAATTGTGGTGCACTCTTCTGAATCTTCAAAGCTACATATGTTGATGCT
                      ____________________________________________________________
consensus             GCAGCTTGAGCAAATTGTGGTGCACTCTTCTGAATCTTCAAAGCTACATATGTTGATGCT
 
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JMSF029E05+           TGAGTATCATAGGCGAGCCAGACAGTGGAGAACTCTCCCCAGCCGAGCTTCCGCTGCGCG
JMSF041L09+           TGAGTATCATAGGCGAGCCAGACAGTGGAGAACTCTCCCCAGCCGAGCTTCCGCTGCGCG
JMSF026N14+           TGAGTATCATAGGCGAGCCAGACAGTGGAGAACTCTCCCCAGCCGAGCTTCCGCTGCGCG
                      ____________________________________________________________
consensus             TGAGTATCATAGGCGAGCCAGACAGTGGAGAACTCTCCCCAGCCGAGCTTCCGCTGCGCG
 
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JMSF029E05+           ATGTACCGGCCGCCGGCGAAGGAATCGCCGACGCGCACCGCGTGGTACCCTCCCTTCCTG
JMSF041L09+           ATGTACCGGCCGCCGGCGAAGGAATCGCCGACGCGCACCGCGTGGTACCCTCCCTTCCTG
JMSF026N14+           ATGTACCGGCCGCCGGCGAAGGAATCGCCGACGCGCACCGCGTGGTACCCTCCCTTCCTG
                      ____________________________________________________________
consensus             ATGTACCGGCCGCCGGCGAAGGAATCGCCGACGCGCACCGCGTGGTACCCTCCCTTCCTG
 
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JMSF029E05+           TACGAGTCCATTGACTCATCCTCCTCCTCCGACCCCGAAGACGACGATGAGCACGACATC
JMSF041L09+           TACGAGTCCATTGACTCATCCTCCTCCTCCGACCCCGAAGACGACGATGAGCACGACATC
JMSF026N14+           TACGAGTCCATTGACTCATCCTCCTCCTCCGACCCCGAAGACGACGATGAGCACGACATC
                      ____________________________________________________________
consensus             TACGAGTCCATTGACTCATCCTCCTCCTCCGACCCCGAAGACGACGATGAGCACGACATC
 
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JMSF029E05+           GTGGTTATCCAAATCCGAATCAAAACACCGTGATCTGCCTAAAAGTTTCCCCTCTGAAAT
JMSF041L09+           GTGGTTATCCAAATCCGAATCAAAACACCGTGATCTGCCTAAAAGTTTCCCCTCTGAAAT
JMSF026N14+           GTGGTTATCCAAATCCGAATCAAAACACCGTGATCTGCCTAAAAGTTTCCCCTCTGAAAT
                      ____________________________________________________________
consensus             GTGGTTATCCAAATCCGAATCAAAACACCGTGATCTGCCTAAAAGTTTCCCCTCTGAAAT
 
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JMSF029E05+           GAATTCGCTCGCGATCAAATTCGAATTATTTGAATACTGGCGATTGTACAATTACAAATA
JMSF041L09+           GAATTCGCTCGCGATCAAATTCGAATTATTTGAATACTGGCGATTGTACAATTACAAATA
JMSF026N14+           GAATTCGCTCGCGATCAAATTCGAATTATTTGAATACTGGCGATTGTACAATTACAAATA
                      ____________________________________________________________
consensus             GAATTCGCTCGCGATCAAATTCGAATTATTTGAATACTGGCGATTGTACAATTACAAATA
 
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JMSF029E05+           CTGTTACAGTTATACGGATGGGGAAGAAAGTTATATGTGCAAGTATCGGT          
JMSF041L09+           CTGTTACAGTTATACGGATGGGGAAGAAAGTTATATGTGCAAGTATCGGT          
JMSF026N14+           CTGTTACAGTTATACGGATGGGGAAGAAAGTTATATGTGCAAGTATCGGTGAAGCCGAGC
                      ____________________________________________________________
consensus             CTGTTACAGTTATACGGATGGGGAAGAAAGTTATATGTGCAAGTATCGGTGAAGCCGAGC