Contig 013387:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027F02Sequence620013387 (4)emb|CDP00757.1|2e-83unnamed protein product [Coffea canephora]
JMFF037P18Sequence521013387 (4)emb|CDP00757.1|3e-83unnamed protein product [Coffea canephora]
JMSF017B19Sequence264013387 (4)emb|CCH14886.1|7e-19quinolinate phosphoribosyltransferase, partial [Nicotiana excelsior]
JMSF026I24Sequence656013387 (4)emb|CDP00757.1|1e-100unnamed protein product [Coffea canephora]754012288 (2)ref|XP_004238845.1|3e-118PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplast

Alignment

This contig is upended


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JMFF027F02+                                                    AAGTGGTATAATTTNTGAG
                      ____________________________________________________________
consensus                                                      AAGTGGTATAATTTNTGAG
 
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JMFF027F02+           AAAATGTTAACCCTCGTTAAGTGATANTAATTCATTCTCGAATCAATGAACAGTGACTTA
                      ____________________________________________________________
consensus             AAAATGTTAACCCTCGTTAAGTGATANTAATTCATTCTCGAATCAATGAACAGTGACTTA
 
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JMFF037P18+                               AGTCAGCGTAGCAATTCCGCTCATTCTCTGCATAAAATTA
JMFF027F02+           CATCAACTTAAACACACCTTAGTCAGCGTAGCAATTCCGCTCATTCTCTGCATAAAATTA
JMSF026I24+                           CCTTAGTCAGTGTAGCAATTCCGCTCATTCTCTGCATAAAATTA
                      ____________________________________________________________
consensus             CATCAACTTAAACACACCTTAGTCAGCGTAGCAATTCCGCTCATTCTCTGCATAAAATTA
 
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JMFF037P18+           AGCACAACCCTTTCAGCAACGATAATACTGTGAGCGTTTCCGTGCACTTTGCCAAATTGC
JMFF027F02+           AGCACAACCCTTTCAGCAACGATAATACTGTGAGCGTTTCCGTGCACTTTGCCAAATTGC
JMSF026I24+           AGCACAACCCTTTCAGCAACGATAATACTGTGAGCGTTTCCGTGCACTTTGCCAAATTGC
                      ____________________________________________________________
consensus             AGCACAACCCTTTCAGCAACGATAATACTGTGAGCGTTTCCGTGCACTTTGCCAAATTGC
 
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JMFF037P18+           AGGCCTTTGTGAACTTTATCACCGTCCTTTCGAGACCACTCCACCTCCAACGTGGGATCA
JMFF027F02+           AGGCCTTTGTGAACTTTATCACCGTCCTTTCGAGACCACTCCACCTCCAACGTGGGATCA
JMSF026I24+           AGGCCTTTGTGAACTTTATCACCGTCCTTTCGAGACCACTCCACCTCCAACGTGGGATCA
                      ____________________________________________________________
consensus             AGGCCTTTGTGAACTTTATCACCGTCCTTTCGAGACCACTCCACCTCCAACGTGGGATCA
 
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JMFF037P18+           ACTTCATCGAATACCATTTCCGCAAGTGCAATCCCGGCTATGATCCCATCCTCCTTTGCT
JMFF027F02+           ACTTCATCGAATACCATTTCCGCAAGTGCAATCCCGGCTATGATCCCATCCTCCTTTGCT
JMSF026I24+           ACTTCATCGAATACCATTTCCGCAAGTGCAATCCCGGCTATGATCCCATCCTCCTTTGCT
                      ____________________________________________________________
consensus             ACTTCATCGAATACCATTTCCGCAAGTGCAATCCCGGCTATGATCCCATCCTCCTTTGCT
 
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JMFF037P18+           ATAAAATGAGCTTCCACTTCCATATCAACTGGAATTGTTGCCTTGCAAGTCACGTCTCCT
JMFF027F02+           ATAAAATGAGCTTCCACTTCCATATCAACTGGAATTGTTGCCTTGCAAGTCACGTCTCCT
JMSF026I24+           ATAAAATGAGCTTCCACTTCCATATCAACTGGAATTGTTGCCTTGCAAGTCACGTCTCCT
                      ____________________________________________________________
consensus             ATAAAATGAGCTTCCACTTCCATATCAACTGGAATTGTTGCCTTGCAAGTCACGTCTCCT
 
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JMFF037P18+           CTATCCCCAGCATCTTCAGAAAGGGCAAGATGAATAACACCCTTCAAATCATAAGTGGGG
JMFF027F02+           CTATCCCCAGCATCTTCAGAAAGGGCAAGATGAATAACACCCTTCAAATCATAAGTGGGG
JMSF017B19+             ATCCCCAGCATNTTCAGAAAGGGCAAGATGAATAACACCCTTCAAATCATAAGTGGGG
JMSF026I24+           CTATCCCCAGCATCTTCAGAAAGGGCAAGATGAATAACACCCTTCAAATCATAAGTGGGG
                      ____________________________________________________________
consensus             CTATCCCCAGCATCTTCAGAAAGGGCAAGATGAATAACACCCTTCAAATCATAAGTGGGG
 
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JMFF037P18+           TGAGCAGGTGGCTTCACTGCCAGAGACTCAACAGCTTTTCCAAGATTATTGATCGTGCCA
JMFF027F02+           TGAGCAGGTGGCTTCACTGCCAGAGACTCAACAGCTTTTCCAAGATTATTGATCGTGCCA
JMSF017B19+           TGAGCAGGTGGCTTCACTGCCAGAGACTCAACAGCTTTTCCAAGATTATTGATCGTGCCA
JMSF026I24+           TGAGCAGGTGGCTTCACTGCCAGAGACTCAACAGCTTTTCCAAGATTATTGATCGTGCCA
                      ____________________________________________________________
consensus             TGAGCAGGTGGCTTCACTGCCAGAGACTCAACAGCTTTTCCAAGATTATTGATCGTGCCA
 
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JMFF037P18+           ACTGCTGACATTTTCACAAGCAATCTGGGAGCAGTGATGGGATGAGCATGGTGCAAAAAT
JMFF027F02+           ACTGCTGACATTTTCACAAGCAATCTGGGAGCAGTGATGGGATGAGCATGGTGCAAAAAT
JMSF017B19+           ACTGCTGACATTTTCACAAGCAATCTGGGAGCAGTGATGGGATGAGCATGGTGCAAAAAT
JMSF026I24+           ACTGCTGACATTTTCACAAGCAATCTGGGAGCAGTGATGGGATGAGCATGGTGCAAAAAT
                      ____________________________________________________________
consensus             ACTGCTGACATTTTCACAAGCAATCTGGGAGCAGTGATGGGATGAGCATGGTGCAAAAAT
 
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JMFF037P18+           GGACGGAGAGAAAAGGCTCTGAACATCGAGAATCTGATGTCGCAACTCAATCTCT     
JMFF027F02+           GGACGGAGAGAAAAGGCTCTGAACATCGAGAATCTGATGTCGCAACTCAATCTCT     
JMSF017B19+           GGACGGAGAGAAAAGGCTCTGAACATCGAGAATCTGATGTCGCAACTCAATCTCTATCTT
JMSF026I24+           GGACGGAGAGAAAAGGCTCTGAACATCGAGAATCTGATGTCGCAACTCAATCTCTATCTT
                      ____________________________________________________________
consensus             GGACGGAGAGAAAAGGCTCTGAACATCGAGAATCTGATGTCGCAACTCAATCTCTATCTT
 
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JMSF017B19+           CAATTCAGTACACACAACAAAAAGC                                   
JMSF026I24+           CAATTCAGTACACACAACAAAAAGCAATAAACCCTTCGCTGGTGGCCTCTGCTTTTCCTC
                      ____________________________________________________________
consensus             CAATTCAGTACACACAACAAAAAGCAATAAACCCTTCGCTGGTGGCCTCTGCTTTTCCTC