Contig 013380:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025N02Sequence724013380 (3)ref|XP_004236571.1|3e-61PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosph698019328ref|XP_009597845.1|2e-06PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosph
JMSF033K24Sequence738013380 (3)ref|XP_004236571.1|7e-110PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosph680001421 (3)ref|XP_009784799.1|4e-37PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosph
JMSF033O01Sequence673013380 (3)ref|XP_004236571.1|6e-94PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosph731001421 (3)ref|NP_001274821.1|5e-52UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferas

Alignment

This contig is upended


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JMSF033K24+                                  TTGTGCAAAATATGGCCAAGAGCCACATATATAGTTT
                      ____________________________________________________________
consensus                                    TTGTGCAAAATATGGCCAAGAGCCACATATATAGTTT
 
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JMSF033K24+           ATAAATCCATCCAAGATCCAGAATTTCTAATCCAACATATTGAACTAGAGGCTTTGGTAT
JMSF033O01+                                       AATCCAACATATTGAACTAGAGGCTTTGGTAT
                      ____________________________________________________________
consensus             ATAAATCCATCCAAGATCCAGAATTTCTAATCCAACATATTGAACTAGAGGCTTTGGTAT
 
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JMSF033K24+           AACAATAGTTGTATGCCCAGCATACGCCATCAACAAAGGAAGAGCTGCAATAGATGGTAA
JMSF033O01+           AACAATAGTTGTATGCCCAGCATACGCCATCAACAAAGGAAGAGCTGCAATAGATGGTAA
                      ____________________________________________________________
consensus             AACAATAGTTGTATGCCCAGCATACGCCATCAACAAAGGAAGAGCTGCAATAGATGGTAA
 
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JMSF033K24+           TAACAATTTCACTCTCCATGGTACATCAAGAACATCATCAACAAATCCAAGCATCATCAT
JMSF033O01+           TAACAATTTCACTCTCCATGGTACATCAAGAACATCATCAACAAATCCAAGCATCATCAT
                      ____________________________________________________________
consensus             TAACAATTTCACTCTCCATGGTACATCAAGAACATCATCAACAAATCCAAGCATCATCAT
 
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JMSF033K24+           GAAGCAGATTGAAGCTAATGCCGCATTGTACTCAACAAGCCAATTTGAATCAGCTGTGAA
JMSF033O01+           GAAGCAGATTGAAGCTAATGCCGCATTGTACTCAACAAGCCAATTTGAATCAGCTGTGAA
JMSF025N02+                    TGAAGCTAATGCCGCATTGTACTCAACAAGCCAATTNGAATCAGCTGTGAA
                      ____________________________________________________________
consensus             GAAGCAGATTGAAGCTAATGCCGCATTGTACTCAACAAGCCAATTTGAATCAGCTGTGAA
 
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JMSF033K24+           GTTAAAGTACTGAAACAAGATAGCCACAACCAAGAAAACGGTCCCAACAACAATACCCAG
JMSF033O01+           GTTAAAGTACTGAAACAAGATAGCCACAACCAAGAAAACGGTCCCAACAACAATACCCAG
JMSF025N02+           GTTAAAGTACTGAAACAAGATAGCCGCAACCAAGAAAACGGTCCCAACAACAATACCCAG
                      ____________________________________________________________
consensus             GTTAAAGTACTGAAACAAGATAGCCACAACCAAGAAAACGGTCCCAACAACAATACCCAG
 
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JMSF033K24+           TGACTCAGGAACTTTAATGGTGCCTTGAGGAGTGCCCCTCTTGTTGATATCGTATCCGAA
JMSF033O01+           TGACTCAGGAACTTTAATGGTGCCTTGAGGAGTGCCCCTCTTGTTGATATCGTATCCGAA
JMSF025N02+           TGACTCAGGCACTTTAACGGTGCCTTGAGGAGTGCCCCTCTTGTTGATATCGTATCCGAA
                      ____________________________________________________________
consensus             TGACTCAGGAACTTTAATGGTGCCTTGAGGAGTGCCCCTCTTGTTGATATCGTATCCGAA
 
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JMSF033K24+           TAAGTTCCTTCTGATAACGTATTTCGAGGCCACGGGGATCATAGCTAAGGTTACGAAGTA
JMSF033O01+           TAAGTTCCTTCTGATAACGTATTTCGAGGCCACGGGGATCATAGCTAAGGTTACGAAGTA
JMSF025N02+           TAAGTTCCTTCTAAGAAGGTATTTCGAGGCCACGGGGATCATAGCTAGGGTTACGAAGTA
                      ____________________________________________________________
consensus             TAAGTTCCTTCTGATAACGTATTTCGAGGCCACGGGGATCATAGCTAAGGTTACGAAGTA
 
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JMSF033K24+           ACCGAGCAAGCTAATTATAGCATTGATGATGATGGATCTCCGGAGCTCCGACTCGATTCG
JMSF033O01+           ACCGAGCAAGCTAATTATAGCATTGATGATGATGGATCTCCGGAGCTCCGACTCGATTCG
JMSF025N02+           ACCAAGCAAGCTAATAATAGCATTGATGATGATGGATCTCCGGAGCTCCGATTCGATTCG
                      ____________________________________________________________
consensus             ACCGAGCAAGCTAATTATAGCATTGATGATGATGGATCTCCGGAGCTCCGACTCGATTCG
 
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JMSF033K24+           GTAGTGGTAGTAGATCAAGTAGAAGTACGGGATTGAGAAAATTGCGGTGCATTTGAACAT
JMSF033O01+           GTAGTGGTAGTAGATCAAGTAGAAGTACGGGATTGAGAAAATTGCGGTGCATTTGAACAT
JMSF025N02+           GTAGTGGTAGTAGATCAAGTAGAAGTACGGGATTGAGAAAATTGCAGTGCATTTGAACAT
                      ____________________________________________________________
consensus             GTAGTGGTAGTAGATCAAGTAGAAGTACGGGATTGAGAAAATTGCGGTGCATTTGAACAT
 
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JMSF033K24+           CAATGGAGCTTTTGAAGGGGTGATCTCCGGCTCGGACGAGGCATCCTCAGGCGTTGGAAC
JMSF033O01+           CAATGGAGCTTTTGAAGGGGTGATCTCCGGCTCGGACGAGGCATCCTCAGGCGTTGGAAC
JMSF025N02+           TAATGGAGCTTTTGAAGGGGTGATGTTCGGCTCGGACGAGGCATCATCAGGCGTTGGAAC
                      ____________________________________________________________
consensus             CAATGGAGCTTTTGAAGGGGTGATCTCCGGCTCGGACGAGGCATCCTCAGGCGTTGGAAC
 
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JMSF033K24+           CGGTTTAGGAACGCCGGATTCCGGTTTAGCAGCCACTCCGGCCGGTTCTTTTGAAGCTCG
JMSF033O01+           CGGTTTAGGAACGCCGGATTCCGGTTTAGCAGCCACTCCGGCCGGTTCTTTTGAAGCTCG
JMSF025N02+           CGGTTTGGAATCGCCGGATTCCTGTTTAGCAGCCACGCCAGCAGGTTCTTTTGAAGCTCG
                      ____________________________________________________________
consensus             CGGTTTAGGAACGCCGGATTCCGGTTTAGCAGCCACTCCGGCCGGTTCTTTTGAAGCTCG
 
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JMSF033K24+           TTTCCTAGCTCCCATGGCTGACTCACAGTTTCTC                          
JMSF033O01+           TTTCCTAGCTCCCATGGCTGACTCACAGTTTCTC                          
JMSF025N02+           TTTCCTAGCTCCCATGGCTGACTCACAGTTTCTCACACCCGCTCGGTCGGTTTTTCGGTC
                      ____________________________________________________________
consensus             TTTCCTAGCTCCCATGGCTGACTCACAGTTTCTCACACCCGCTCGGTCGGTTTTTCGGTC
 
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JMSF025N02+           AGTTATAGCATCATTTCGGCTCAGTTTTTCGATTGGAATTTTTCGGTCGGGTTATCCAAA
                      ____________________________________________________________
consensus             AGTTATAGCATCATTTCGGCTCAGTTTTTCGATTGGAATTTTTCGGTCGGGTTATCCAAA
 
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JMSF025N02+           AACGGAAAGATTAATAAATTATTCCACAATCTATGAACACGTATAAAACTTATGTTATTT
                      ____________________________________________________________
consensus             AACGGAAAGATTAATAAATTATTCCACAATCTATGAACACGTATAAAACTTATGTTATTT
 
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JMSF025N02+           TTGCCCATGACATCTTCTGGGGAGCATTTTTGTACGATGTGTATTACGAGGTGTGCGTTC
                      ____________________________________________________________
consensus             TTGCCCATGACATCTTCTGGGGAGCATTTTTGTACGATGTGTATTACGAGGTGTGCGTTC