Contig 013364:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016L15Sequence512013364 (3)ref|XP_009779634.1|2e-26PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Nicotiana sylvestr787008518 (3)ref|XP_004237858.1|4e-73PREDICTED: alkylated DNA repair protein alkB homolog 8 [Solanum lycopersicum]
JMSF021N12Sequence652013364 (3)ref|XP_009779634.1|2e-59PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Nicotiana sylvestr742008518 (3)ref|XP_004237858.1|7e-59PREDICTED: alkylated DNA repair protein alkB homolog 8 [Solanum lycopersicum]
JMSF023C07Sequence655013364 (3)ref|XP_009779634.1|3e-60PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Nicotiana sylvestr810008518 (3)ref|XP_004237858.1|2e-78PREDICTED: alkylated DNA repair protein alkB homolog 8 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021N12+ TCTGCAACTAACACCTCGTGTCCCCTATCCGCACATATATTGATAAGTGGAGCA
JMSF023C07+ ATCTGCAACTAACACCTCGTGTCCCCTATCCGCACATATATTGATAAGTGGAGCA
                      ____________________________________________________________
consensus ATCTGCAACTAACACCTCGTGTCCCCTATCCGCACATATATTGATAAGTGGAGCA
 
. : . : . : . : . : . :
JMSF021N12+ CTAATATCACATCCAATAAATAAACAATTTGGATTCAACCCTAAATATTTGCCATTTCCA
JMSF023C07+ CTAATATCACATCCAATAAATAAACAATTTGGATTCAACCCTAAATATTTGCCATTTCCA
                      ____________________________________________________________
consensus CTAATATCACATCCAATAAATAAACAATTTGGATTCAACCCTAAATATTTGCCATTTCCA
 
. : . : . : . : . : . :
JMSF021N12+ CAGCCCGCATCCAAAATAAGTGAACCCACAGGCAATGAATTCAAGAAAGCAGAAACTTTC
JMSF016L15+ ACAGGCAATGAATTCAAGAAAGCAGAAACTTTC
JMSF023C07+ CAGCCCGCATCCAAAATAAGTGAACCCACAGGCAATGAATTCAAGAAAGCAGAAACTTTC
                      ____________________________________________________________
consensus CAGCCCGCATCCAAAATAAGTGAACCCACAGGCAATGAATTCAAGAAAGCAGAAACTTTC
 
. : . : . : . : . : . :
JMSF021N12+ GGCCACTTGGCAAACCTAGTGGAACTGAAATGGGGAGCAATTGCATCATAAACTCGATGA
JMSF016L15+ GGCCACTNGGCAAACCTAGTGGAACTGAAATGGGGAGCAATTGCATCATAAACTCGATGA
JMSF023C07+ GGCCACTTGGCAAACCTAGTGGAACTGAAATGGGGAGCAATTGCATCATAAACTCGATGA
                      ____________________________________________________________
consensus GGCCACTTGGCAAACCTAGTGGAACTGAAATGGGGAGCAATTGCATCATAAACTCGATGA
 
. : . : . : . : . : . :
JMSF021N12+ ACATACTTTTTTTCAATTTCCGGGGTCGATTGAACATTTGAGGAAGTATCTTTCTTATCC
JMSF016L15+ ACATACTTTTTTTCAATTTCCGGGGTCGATTGAACATTTGAGGAAGTATCTTTCTTATCC
JMSF023C07+ ACATACTTTTTTTCAATTTCCGGGGTCGATTGAACATTTGAGGAAGTATCTTTCTTATCC
                      ____________________________________________________________
consensus ACATACTTTTTTTCAATTTCCGGGGTCGATTGAACATTTGAGGAAGTATCTTTCTTATCC
 
. : . : . : . : . : . :
JMSF021N12+ GAGCTCACAGAAACTGGTCGTAGCACACAAGACTCTCTGTCAGATTCAGAAGCATACAAT
JMSF016L15+ GAGCTCACAGAAACTGGTCGTAGCACACAAGACTCTCTGTCAGATTCAGAAGCATACAAT
JMSF023C07+ GAGCTCACAGAAACTGGTCGTAGCACACAAGACTCTCTGTCAGATTCAGAAGCATACAAT
                      ____________________________________________________________
consensus GAGCTCACAGAAACTGGTCGTAGCACACAAGACTCTCTGTCAGATTCAGAAGCATACAAT
 
. : . : . : . : . : . :
JMSF021N12+ CTAGAACCACCATCAATTCCAACTTCTCTCATTGTTCTAAAACAGCCTTGATTGCCAATG
JMSF016L15+ CTAGAACCACCATCAATTCCAACTTCTCTCATTGTTCTAAAACAGCCTTGATTGCCAATG
JMSF023C07+ CTAGAACCACCATCAATTCCAACTTCTCTCATTGTTCTAAAACAGCCTTGATTGCCAATG
                      ____________________________________________________________
consensus CTAGAACCACCATCAATTCCAACTTCTCTCATTGTTCTAAAACAGCCTTGATTGCCAATG
 
. : . : . : . : . : . :
JMSF021N12+ GTATTATTACCAACAATGATAGGCCGCCCAATGTCACAAAACCCTCCTCTCGAATACAAT
JMSF016L15+ GTATTATTACCAACAATGATAGGCCGCCCAATGTCACAAAACCCTCCTCTCGAATACAAT
JMSF023C07+ GTATTATTACCAACAATGATAGGCCGCCCAATGTCACAAAACCCTCCTCTCGAATACAAT
                      ____________________________________________________________
consensus GTATTATTACCAACAATGATAGGCCGCCCAATGTCACAAAACCCTCCTCTCGAATACAAT
 
. : . : . : . : . : . :
JMSF021N12+ GCTATAGATCGTAAAGCACCTATAAGCATAACAACTATACAAGTATCTCCATATAGAGAC
JMSF016L15+ GCTATAGATCGTAAAGCACCTATAAGCATAACAACTATACAAGTATCTCCATATAGAGAC
JMSF023C07+ GCTATAGATCGTAAAGCACCTATAAGCATAACAACTATACAAGTATCTCCATATAGAGAC
                      ____________________________________________________________
consensus GCTATAGATCGTAAAGCACCTATAAGCATAACAACTATACAAGTATCTCCATATAGAGAC
 
. : . : . : . : . : . :
JMSF021N12+ AGTCTCAGGCTTTCAGCGGTCCTTCACTACGA-TTTGAGGCAAGTGGGGTCATCATCCAC
JMSF016L15+ AGTCTCAGGCTTTCAGCGGTCCTTCACTACGATTTTGAGGCAAGTGGGGTCATCATCCAC
JMSF023C07+ AGTCTCAGGCTTTCAGCGGTCCTTCACTACGATTTTGAGGCAAGTGGGGTCATCATCCAC
                      ____________________________________________________________
consensus AGTCTCAGGCTTTCAGCGGTCCTTCACTACGATTTTGAGGCAAGTGGGGTCATCATCCAC
 
. : . : . : . : . : . :
JMSF021N12+ TACTAAACCTGTTTCTGGGAGTTACTCCGTAGATCAGTGAGAGACATTATAGGGACC
JMSF016L15+ TACTAAACCTGTTTCTGGGAGTTACTCCGTAGATCAGTGAGAGACATTATAGGGACC
JMSF023C07+ TACTAAACCTGTTTCTGGGAGTTACTCCGTAGATCAGTGAGAGACATTATAGGGACCTCT
                      ____________________________________________________________
consensus TACTAAACCTGTTTCTGGGAGTTACTCCGTAGATCAGTGAGAGACATTATAGGGACCTCT