Contig 013354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010H09Sequence464013354 (3)790012539 (3)emb|CDP02533.1|3e-58unnamed protein product [Coffea canephora]
JMSF020E23Sequence610013354 (3)ref|XP_009619625.1|110PREDICTED: uncharacterized protein LOC104111597 [Nicotiana tomentosiformis]794012539 (3)emb|CDP02533.1|1e-51unnamed protein product [Coffea canephora]
JMSF022F04Sequence650013354 (3)ref|XP_009619625.1|85.1PREDICTED: uncharacterized protein LOC104111597 [Nicotiana tomentosiformis]774012539 (3)emb|CDP02533.1|9e-59unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF020E23+                        TATTCTGGGAGACAATATGGCGTGCCTTAACCTGCAAAGCCTTCACT
JMSF022F04+                                                                  TCACT
                      ____________________________________________________________
consensus                          TATTCTGGGAGACAATATGGCGTGCCTTAACCTGCAAAGCCTTCACT
 
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JMSF020E23+           GCACTCATAGATGAGTCAGCCAGTCCTTTAGTAAGTGATTCAATAACACTTGATTGAGCA
JMSF022F04+           GCACTCATAGATGAGTCAGCCAGTCCTTTAGTAAGTGATTCAATAACACTTGATTGAGCA
                      ____________________________________________________________
consensus             GCACTCATAGATGAGTCAGCCAGTCCTTTAGTAAGTGATTCAATAACACTTGATTGAGCA
 
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JMSF020E23+           TTAGCTGAGTTGTCTCCAGCGCTCTCATTCATTAAGGAGGGTTTAGATGTGAACTGCAAT
JMSF022F04+           TTAGCTGAGTTGTCTCCAGCGCTCTCATTCATTAAGGAGGGTTTAGATGTGAACTGCAAT
                      ____________________________________________________________
consensus             TTAGCTGAGTTGTCTCCAGCGCTCTCATTCATTAAGGAGGGTTTAGATGTGAACTGCAAT
 
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JMSF020E23+           CCAAATCCACTCGCAAGGCGTGAAAGGGATGGCCAACTGACAGTCCCAGTCTCTGAATTC
JMSF022F04+           CCAAATCCACTCGCAAGGCGTGAAAGGGATGGCCAACTGACAGTCCCAGTCTCTGAATTC
                      ____________________________________________________________
consensus             CCAAATCCACTCGCAAGGCGTGAAAGGGATGGCCAACTGACAGTCCCAGTCTCTGAATTC
 
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JMSF020E23+           TGTTGTCCTTGTTGCACAGGTTGTGGAGCTCTTAGACTTATGGCCCAAGAAGCTAGGGGT
JMSF010H09+                        GCACAGGTTGTGGAGCTCTTAGACTTATGGCCCAAGAAGCTAGGGGT
JMSF022F04+           TGTTGTCCTTGTTGCACAGGTTGTGGAGCTCTTAGACTTATGGCCCAAGAAGCTAGGGGT
                      ____________________________________________________________
consensus             TGTTGTCCTTGTTGCACAGGTTGTGGAGCTCTTAGACTTATGGCCCAAGAAGCTAGGGGT
 
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JMSF020E23+           GGTGTAGTTATGCTGTCTGAAGGGCTATCTTTCTCAGAGACAATGGATTCCGAAGGTTCG
JMSF010H09+           GGTGTAGTTATGCTGTCTGAAGGGCTATCTTTCTCAGAGACAATGGATTCCGAAGGTTCG
JMSF022F04+           GGTGTAGTTATGCTGTCTGAAGGGCTATCTTTCTCAGAGACAATGGATTCCGAAGGTTCG
                      ____________________________________________________________
consensus             GGTGTAGTTATGCTGTCTGAAGGGCTATCTTTCTCAGAGACAATGGATTCCGAAGGTTCG
 
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JMSF020E23+           ACTTCAGAAGCTGTATTAGAGGGTGGCGGAGATGGATTGGTGGTTCCAGAATCCATAATG
JMSF010H09+           ACTTCAGAAGCTGTATTAGAGGGTGGCGGAGATGGATTGGTGGTTCCAGAATCCATAATG
JMSF022F04+           ACTTCAGAAGCTGTATTAGAGGGTGGCGGAGATGGATTGGTGGTTCCAGAATCCATAATG
                      ____________________________________________________________
consensus             ACTTCAGAAGCTGTATTAGAGGGTGGCGGAGATGGATTGGTGGTTCCAGAATCCATAATG
 
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JMSF020E23+           GAAATAATGGAAATCGTAGCAACCTCTGTGTAATCTCGGATTGGGAGCTTCCTCGGATCC
JMSF010H09+           GAAATAATGGAAATCGTAGCAACCTCTGTGTAATCTCGGATTGGGAGCTTCCTCGGATCC
JMSF022F04+           GAAATAAT---------------CTCTGTGTAATCTCGGATTGGGAGCTTCCTCGGATCC
                      ____________________________________________________________
consensus             GAAATAATGGAAATCGTAGCAACCTCTGTGTAATCTCGGATTGGGAGCTTCCTCGGATCC
 
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JMSF020E23+           TCGGAAGCTTTTCTATGGATCTAATTCGGAAATGGCAAATAAACAATGCCGGGAACGAAA
JMSF010H09+           TCGGAAGCTTTTCTATGGATCTAATTCGGAAATGGCAAATAAACAATGCCGGGAACGAAA
JMSF022F04+           TCGGAAGCTTTTCTATGGATCTAATTCGGAAATGGCAAATAAACAATGCCGGGAACGAAA
                      ____________________________________________________________
consensus             TCGGAAGCTTTTCTATGGATCTAATTCGGAAATGGCAAATAAACAATGCCGGGAACGAAA
 
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JMSF020E23+           TGAGATTGAGTCCAGTTCGAAGTACAGGGGGCGCTAACGGCGGTGGCAGTGGCCGTGGTT
JMSF010H09+           TGAGATTGAGTCCAGTTCGAAGTACAGGGGGCGCTAACGGCGGTGGCAGTGGCCGTGGTT
JMSF022F04+           TGAGATTGAGTCCAGTTCGAAGTACAGGGGGCGCTAACGGCGGTGGCAGTGGCCGTGGTT
                      ____________________________________________________________
consensus             TGAGATTGAGTCCAGTTCGAAGTACAGGGGGCGCTAACGGCGGTGGCAGTGGCCGTGGTT
 
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JMSF020E23+           TCTGAATCTACGACTAGGATCC                                      
JMSF010H09+           TCTGAATCTACGACTAGGATCCACTTTTTGGTGGATCTATATTCTATGGTGATGTAACAT
JMSF022F04+           TCTGAATCTACGACTAGGATCCACTTTTTGGTGGATCTATATTCTATGGTGATGTAACAT
                      ____________________________________________________________
consensus             TCTGAATCTACGACTAGGATCCACTTTTTGGTGGATCTATATTCTATGGTGATGTAACAT
 
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JMSF010H09+           TTTTCCAGATCAGGATCTTACCGGTCAACATCGGAATTTCATTTTCCAGAATT       
JMSF022F04+           TTTTCCAGATCAGGATCTTACCGGTCAACATCGGAATTTCATTTTCCAGAATTTCAGTGC
                      ____________________________________________________________
consensus             TTTTCCAGATCAGGATCTTACCGGTCAACATCGGAATTTCATTTTCCAGAATTTCAGTGC