Contig 013348:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011B22Sequence351013348 (2)738008513 (2)ref|XP_009759488.1|1e-96PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri
JMSF021I03Sequence690013348 (2)ref|XP_011093490.1|1e-25PREDICTED: probable receptor-like protein kinase At5g47070 [Sesamum indicum] re749008513 (2)ref|XP_009759488.1|7e-100PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021I03+ CTGATAACCATCTCTGCTGAGTTTCTTAAT
                      ____________________________________________________________
consensus CTGATAACCATCTCTGCTGAGTTTCTTAAT
 
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JMSF021I03+ CGCAACCACGATTCGGTCACCTTTACCATCAACTGGCTTAACCATTCCCTNGTACACACT
                      ____________________________________________________________
consensus CGCAACCACGATTCGGTCACCTTTACCATCAACTGGCTTAACCATTCCCTNGTACACACT
 
. : . : . : . : . : . :
JMSF021I03+ CCCAAAACCGCCCTCTCCAACCTTAAGTAACCTGCAGAAATTATGGTTGCTTGTCTAAGT
                      ____________________________________________________________
consensus CCCAAAACCGCCCTCTCCAACCTTAAGTAACCTGCAGAAATTATGGTTGCTTGTCTAAGT
 
. : . : . : . : . : . :
JMSF011B22+ TAGGCTTCAGAGAAGCTA
JMSF021I03+ TCATTGAAGGAAAACTCTCTCAAGTTTTGAGCTTTCCCCTCGTAGGCTTCAGAGAAGCTA
                      ____________________________________________________________
consensus TCATTGAAGGAAAACTCTCTCAAGTTTTGAGCTTTCCCCTCGTAGGCTTCAGAGAAGCTA
 
. : . : . : . : . : . :
JMSF011B22+ CGGGGAGACGAGGCTGAACATGAAGAGCGCGTGGCCCTTTCAGCCGCCCCTGAAATATCT
JMSF021I03+ CGGGGAGACGAGGCTGAACATGAAGAGCGCGTGGCCCTTTCAGCCGCCCCTGAAATATCT
                      ____________________________________________________________
consensus CGGGGAGACGAGGCTGAACATGAAGAGCGCGTGGCCCTTTCAGCCGCCCCTGAAATATCT
 
. : . : . : . : . : . :
JMSF011B22+ GATGATTTGCTCTGCTCCTTCAACACTGGTGCTGATTTTTGTGCCTTTCCTTTGTTTCTA
JMSF021I03+ GATGATTTGCTCTGCTCCTTCAACACTGGTGCTGATTTTTGTGCCTTTCCTTTGTTTCTA
                      ____________________________________________________________
consensus GATGATTTGCTCTGCTCCTTCAACACTGGTGCTGATTTTTGTGCCTTTCCTTTGTTTCTA
 
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JMSF011B22+ TCCTTGAAGTATAGCAAACAATTCATCTTCTCTCTCCCAATTCAATGTTCAATAGCAGCT
JMSF021I03+ TCCTTGAAGTATAGCAAACAATTCATCTTCTCTCTCCCAATTCAATGTTCAATAGCAGCT
                      ____________________________________________________________
consensus TCCTTGAAGTATAGCAAACAATTCATCTTCTCTCTCCCAATTCAATGTTCAATAGCAGCT
 
. : . : . : . : . : . :
JMSF011B22+ CAGCTCCCTCACAATAAACTGATTTTGTTTCTATCCTTGAAGTATAGCAAACAATTCATC
JMSF021I03+ CAGCTCCCTCACAATAAACTGATTTTGTTTCTATCCTTGAAGTATAGCAAACAATTCATC
                      ____________________________________________________________
consensus CAGCTCCCTCACAATAAACTGATTTTGTTTCTATCCTTGAAGTATAGCAAACAATTCATC
 
. : . : . : . : . : . :
JMSF011B22+ TTCTTCCCCCTTCCTCTCTCTCAATTCAATGTTCAATAACAGCTCCCTCACAATAAACTG
JMSF021I03+ TTCTTCCCCCTTCCTCTCTCTCAATTCAATGTTCAATAACAGCTCCCTCACAATAAACTG
                      ____________________________________________________________
consensus TTCTTCCCCCTTCCTCTCTCTCAATTCAATGTTCAATAACAGCTCCCTCACAATAAACTG
 
. : . : . : . : . : . :
JMSF011B22+ ATTTTGTTCAACCGCTTGGACTCCTGGGGCTC
JMSF021I03+ ATTTTGTTCAACCGCTTGGACTCCTGGGGCTCAGGAAAGTGTCAACTTTCAGAAGTTAAA
                      ____________________________________________________________
consensus ATTTTGTTCAACCGCTTGGACTCCTGGGGCTCAGGAAAGTGTCAACTTTCAGAAGTTAAA
 
. : . : . : . : . : . :
JMSF021I03+ AGATTAAATAAACATAAAGGAAATATATTAAAGATCTGGGAAGGTTTGTGAATCTTCAAC
                      ____________________________________________________________
consensus AGATTAAATAAACATAAAGGAAATATATTAAAGATCTGGGAAGGTTTGTGAATCTTCAAC
 
. : . : . : . : . : . :
JMSF021I03+ TGTAGTTTGACTGCTTGGGGGTTGGCCCCTTTCTCTCCTGTCTCACTCAAATCTCAATCC
                      ____________________________________________________________
consensus TGTAGTTTGACTGCTTGGGGGTTGGCCCCTTTCTCTCCTGTCTCACTCAAATCTCAATCC