Contig 013331:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019H02Sequence254013331 (2)716003021 (2)ref|XP_007145646.1|3e-94hypothetical protein PHAVU_007G256500g [Phaseolus vulgaris] gb|ESW17640.1| hypot
JMSF052M06Sequence646013331 (2)ref|XP_006355151.1|3e-55PREDICTED: vacuolar amino acid transporter 1-like [Solanum tuberosum]925003021 (2)ref|XP_009793352.1|1e-103PREDICTED: vacuolar amino acid transporter 1 isoform X6 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF052M06+                      TCTCTGCTCTCAAAACAGCGCTTCATAAGAGAAGCTGTATAGCAACAAA
                      ____________________________________________________________
consensus                        TCTCTGCTCTCAAAACAGCGCTTCATAAGAGAAGCTGTATAGCAACAAA
 
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JMSF052M06+           TAACAGCAAAAGCAACCAACACCGCTATGCTAGCCCAGCCAGCTTCTTTGACTGTGAAAG
                      ____________________________________________________________
consensus             TAACAGCAAAAGCAACCAACACCGCTATGCTAGCCCAGCCAGCTTCTTTGACTGTGAAAG
 
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JMSF052M06+           GAGTAGAAAGAAGCCCGATTCCAGCCATCACATTGAGCCCATTGAATACAGTTTGTGTCA
                      ____________________________________________________________
consensus             GAGTAGAAAGAAGCCCGATTCCAGCCATCACATTGAGCCCATTGAATACAGTTTGTGTCA
 
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JMSF052M06+           GGTTACATCCATGGCTAATAGGAAGCTCCCCAGTGACTTTTTCATGCAATGAGGCCTTTT
                      ____________________________________________________________
consensus             GGTTACATCCATGGCTAATAGGAAGCTCCCCAGTGACTTTTTCATGCAATGAGGCCTTTT
 
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JMSF052M06+           CAGAGAAGGATGACTGTTTTATTGGGATCCCATCCAAGAAGTCCTTCTTGCCGTGTTTGA
                      ____________________________________________________________
consensus             CAGAGAAGGATGACTGTTTTATTGGGATCCCATCCAAGAAGTCCTTCTTGCCGTGTTTGA
 
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JMSF052M06+           TAGCTTGAGGCAGCAAATGTGTCTTCTCATCAGAGTTTATGTATCTTTTAATATTCGCAT
                      ____________________________________________________________
consensus             TAGCTTGAGGCAGCAAATGTGTCTTCTCATCAGAGTTTATGTATCTTTTAATATTCGCAT
 
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JMSF052M06+           CAGAAGGTGACAATGCGACACTAGATCCACGTCGCAGAAGTCCTACGTTAGGTGATGCAG
                      ____________________________________________________________
consensus             CAGAAGGTGACAATGCGACACTAGATCCACGTCGCAGAAGTCCTACGTTAGGTGATGCAG
 
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JMSF052M06+           CAATTGAATACGAGTCAGTTGTTTCCCTGAAACTCTGTGGCCATTGCTGAGAGAAGAATG
JMSF019H02+                                                         CTGAGAGAAGAATG
                      ____________________________________________________________
consensus             CAATTGAATACGAGTCAGTTGTTTCCCTGAAACTCTGTGGCCATTGCTGAGAGAAGAATG
 
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JMSF052M06+           GAGATGAAGACGACGAAGAAGGTGATTTCTGAGCAACAATTTCATCTCCTCCTCCTTCTT
JMSF019H02+           GAGATGAAGACGACGAAGAAGGTGATTTCTGAGCAACAATTTCATCTCCTCCTCCTTCTT
                      ____________________________________________________________
consensus             GAGATGAAGACGACGAAGAAGGTGATTTCTGAGCAACAATTTCATCTCCTCCTCCTTCTT
 
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JMSF052M06+           CTTCTTCTTCTTCTTCTTCTTCATCGCTCGTATTTCTGTTATCCTCAACGTCACATTCAT
JMSF019H02+           CTTCTTCTTCTTCTTCTTCTTCATCGCTCGTATTTCTGTTATCCTCAACGTCACATTCAT
                      ____________________________________________________________
consensus             CTTCTTCTTCTTCTTCTTCTTCATCGCTCGTATTTCTGTTATCCTCAACGTCACATTCAT
 
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JMSF052M06+           CGTCGTTCTCCAAGAAGTACTCCATTAAGTCCTTATCCTTTTCCGCCATGGCTACC    
JMSF019H02+           CGTCGTTCTCCAAGAAGTACTCCATTAAGTCCTTATCCTTTTCCGCCATGGCTACCGCTG
                      ____________________________________________________________
consensus             CGTCGTTCTCCAAGAAGTACTCCATTAAGTCCTTATCCTTTTCCGCCATGGCTACCGCTG
 
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JMSF019H02+           CTCCAACAATTAATTCTATTGGCCAAAACTTTGATACCTATGGAACGGTGTGAGGCAGTC
                      ____________________________________________________________
consensus             CTCCAACAATTAATTCTATTGGCCAAAACTTTGATACCTATGGAACGGTGTGAGGCAGTC