Contig 013327:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021B17Sequence511013327 (5)ref|XP_009606335.1|1e-66PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tomentosiformis]698009691 (4)ref|XP_006361008.1|1e-72PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]
JMFF038J21Sequence452013327 (5)ref|XP_009606335.1|9e-40PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tomentosiformis]746009691 (4)ref|XP_006361008.1|1e-79PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]
JMFS001H08Sequence475013327 (5)ref|XP_009606335.1|2e-29PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tomentosiformis]
JMFS106H02Sequence631013327 (5)ref|XP_009606335.1|2e-50PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tomentosiformis]
JMSF018J22Sequence202013327 (5)707009691 (4)ref|XP_006361008.1|1e-77PREDICTED: 3-ketoacyl-CoA synthase 1-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF021B17+ TGAGGCAAGTAGGTTTCGTCTCCCAGA
                      ____________________________________________________________
consensus TGAGGCAAGTAGGTTTCGTCTCCCAGA
 
. : . : . : . : . : . :
JMFF021B17+ CCGGACCGGTGAGCTATCTTCTTCTGAAAACCAACAGTATCACCGGAAAACGCGCCGTTT
                      ____________________________________________________________
consensus CCGGACCGGTGAGCTATCTTCTTCTGAAAACCAACAGTATCACCGGAAAACGCGCCGTTT
 
. : . : . : . : . : . :
JMFF021B17+ TCCTCGGTCATTTTCAAGAACGAGTCGACCGAGATTTTCCGTTCGTCTTCCGGTTTATAA
JMFF038J21+ ACGAGTCGACCGAGATTTTCCGTTCGTCTTCCGGTTTATAA
JMFS106H02+ TTTCAAGAACGAGTCGACCGAGATTTTCCGTTCGTCTTCCGGTTTATAA
                      ____________________________________________________________
consensus TCCTCGGTCATTTTCAAGAACGAGTCGACCGAGATTTTCCGTTCGTCTTCCGGTTTATAA
 
. : . : . : . : . : . :
JMFF021B17+ CAGGCGAAATCCACCAAGTAGACCGGTCTGGGACGGCGGGCCAAATAAATGGCTAGAAAG
JMFF038J21+ CAGGCGAAATCCACCAAGTAGACCGGTCTGGGACGGCGGGCCAAATAAATGGCTAGAAAG
JMFS106H02+ CAGGCGAAATCCACCAAGTAGACCGGTCTGGGACGGCGGGCCAAATAAATGGCTAGAAAG
                      ____________________________________________________________
consensus CAGGCGAAATCCACCAAGTAGACCGGTCTGGGACGGCGGGCCAAATAAATGGCTAGAAAG
 
. : . : . : . : . : . :
JMFF021B17+ AAGAGCAGAACCACCAGA-CCGGTAACGCCGGTGGCGGTGTCCACAATCAAACTCAGACT
JMFF038J21+ AAGAGCAGAACCACCAGACCCGGTAACGCCGGTGGCGGTGTCCACAATCAAACTCAGACT
JMFS106H02+ AAGAGCAGAACCACCAGA-CCGGTAACGCCGGTGGCGGTGTCCACAATCAAACTCAGACT
                      ____________________________________________________________
consensus AAGAGCAGAACCACCAGA-CCGGTAACGCCGGTGGCGGTGTCCACAATCAAACTCAGACT
 
. : . : . : . : . : . :
JMFF021B17+ TGGGCTGCTATAAAACTCAGAAAAGCGGCGGAATCTGAGACCGGTGAGTTGAAACGCCGT
JMFF038J21+ TGGGCTGCTATAAAACTCAGAAAAGCGGCGGAATCTGAGACCGGTGAGTTGAAACGCCGT
JMFS106H02+ TGGGCTGCTATAAAACTCAGAAAAGCGGCGGAATCTGAGACCGGTGAGTTGAAACGCCGT
JMFS001H08+ CTATAAAACTCAGAAAAGCGGCGGAATCTGAGACCGGTGAGTTGAAACGCCGT
                      ____________________________________________________________
consensus TGGGCTGCTATAAAACTCAGAAAAGCGGCGGAATCTGAGACCGGTGAGTTGAAACGCCGT
 
. : . : . : . : . : . :
JMFF021B17+ GACGCCAAACAGCGCCGCAATCATGGCCAGCGAGGTGACCGGGTAATTGCAAGAATACCC
JMFF038J21+ GACGCCAAACAGCGCCGCAATCATGGCCAGCGAGGTGACCGGGTAATTGCAAGAATACCC
JMFS106H02+ GACGCCAAACAGCGCCGCAATCATGGCCAGCGAGGTGACCGGGTAATTGCAAGAATACCC
JMFS001H08+ GACGCCAAACAGCGCCGCAATCATGGCCAGCGAGGTGACCGGGTAATTGCAAGAATACCC
                      ____________________________________________________________
consensus GACGCCAAACAGCGCCGCAATCATGGCCAGCGAGGTGACCGGGTAATTGCAAGAATACCC
 
. : . : . : . : . : . :
JMFF021B17+ ATACCCTAATTTCACATACTTTAGCTTCACGGATTGAAGAAAATCCGGCAAGCGTTGCCG
JMFF038J21+ ATACCCTAATTTCACATACTTTAGCTTCACGGATTGAAGAAAATCCGGCAAGCGTTGCCG
JMFS106H02+ ATACCCTAATTTCACATACTTTAGCTTCACGGATTGAAGAAAATCCGGCAAGCGTTGCCG
JMFS001H08+ ATACCCTAATTTCACATACTTTAGCTTCACGGATTGAAGAAAATCCGGCAAGCGTTGCCG
                      ____________________________________________________________
consensus ATACCCTAATTTCACATACTTTAGCTTCACGGATTGAAGAAAATCCGGCAAGCGTTGCCG
 
. : . : . : . : . : . :
JMFF021B17+ GATCTTGATGACGACGGAGGATGAATCTTTGAAATCCATCTCAGCCGTCAGTCTCTCCTT
JMFF038J21+ GATCTTGATGACGACGGAGGATGAATCTTTGAAATCCATCTCAGCCGTCAGTCTCTCCTT
JMFS106H02+ GATCTTGATGACGACGGAGGATGAATCTTTGAAATCCATCTCAGCCGTCAGTCTCTCCTT
JMFS001H08+ GATCTTGATGACGACGGAGGATGAATCTTTGAAATCCATCTCAGCCGTCAGTCTCTCCTT
                      ____________________________________________________________
consensus GATCTTGATGACGACGGAGGATGAATCTTTGAAATCCATCTCAGCCGTCAGTCTCTCCTT
 
. : . : . : . : . : . :
JMFF021B17+ CTCC
JMFF038J21+ CTCCATCTCTATGCTGTCTTTGGCAGCCATATATGATATGAT
JMFS106H02+ CTCCATCTCTATGCTGTCTTTGGCAGCCATATATGATATGATATGATAGATATATCTCAG
JMFS001H08+ CTCCATCTCTATGCTGTCTTTGGCAGCCATATATGATATGATATGATAGATATATCTCAG
                      ____________________________________________________________
consensus CTCCATCTCTATGCTGTCTTTGGCAGCCATATATGATATGATATGATAGATATATCTCAG
 
. : . : . : . : . : . :
JMFS106H02+ CTCCGCTCCTAATAAATATATACAAATATATTTTATACAAATATATATTGCAGATCCAGG
JMFS001H08+ CTCCGCTCCTAATAAATATATACAAATATATTTTATACAAATATATATTGCAGATCCAGG
JMSF018J22+ AAATATATATTGCAGATCCAGG
                      ____________________________________________________________
consensus CTCCGCTCCTAATAAATATATACAAATATATTTTATACAAATATATATTGCAGATCCAGG
 
. : . : . : . : . : . :
JMFS106H02+ GAAAGAAGGAAGGGAAGTGTGTGGGAGAGGGTATAGTCTCAGAGAAGCTGAACTAATTGA
JMFS001H08+ GAAAGAAGGAAGGGAAGTGTGTGGGAGAGGGTATAGTCTCAGAGAAGCTGAACTAATTGA
JMSF018J22+ GAAAGAAGGAAGGGAAGTGTGTGGGAGAGGGTATAGTCTCAGAGAAGCTGAACTAATTGA
                      ____________________________________________________________
consensus GAAAGAAGGAAGGGAAGTGTGTGGGAGAGGGTATAGTCTCAGAGAAGCTGAACTAATTGA
 
. : . : . : . : . : . :
JMFS106H02+ TGAAGAAAAAAGAGAAGAAAAGAGAAGAGAAGAAAGAAG
JMFS001H08+ TGAAGAAAAAAGAGAAGAAAAGAGAAGAGAAGAAAGAAGGTTT
JMSF018J22+ TGAAGAAAAAAGAGAAGAAAAGAGAAGAGAAGAAAGAAGGTTTGAAAAGGGTAGTTGGAG
                      ____________________________________________________________
consensus TGAAGAAAAAAGAGAAGAAAAGAGAAGAGAAGAAAGAAGGTTTGAAAAGGGTAGTTGGAG
 
. : . : . : . : . : . :
JMSF018J22+ CTTGATGAGAAAATTAAAGCCCCTACTTATATATTACATATGTGCATTGGGAAGCAACTC
                      ____________________________________________________________
consensus CTTGATGAGAAAATTAAAGCCCCTACTTATATATTACATATGTGCATTGGGAAGCAACTC