Contig 013320:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030C13Sequence432013320 (5)gb|ACU24342.1|4e-26unknown [Glycine max]722013320 (5)sp|Q40517.1|NTF3_TOBAC1e-74RecName: Full=Mitogen-activated protein kinase homolog NTF3; AltName: Full=P43
JMFS167H10Sequence627013320 (5)ref|XP_008347362.1|7e-133PREDICTED: mitogen-activated protein kinase homolog NTF3 [Malus domestica]
JMSF017L08Sequence415013320 (5)789013320 (5)sp|Q40517.1|NTF3_TOBAC1e-97RecName: Full=Mitogen-activated protein kinase homolog NTF3; AltName: Full=P43

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF030C13- AGTTGTTAAGTCAACATGACAGGTAGTTAATGACTTAATGTACATGATCAAAT
rJMSF017L08- GGTAGTTAATGACTTAATGTACATGATCAAAT
                      ____________________________________________________________
consensus AGTTGTTAAGTCAACATGACAGGTAGTTAATGACTTAATGTACATGATCAAAT
 
. : . : . : . : . : . :
rJMFF030C13- CAGGTTCTTGAACTACAAAACCACAATTATACACGAGCCCCGCGCCAAACGAAGCTTGGC
rJMSF017L08- CAGGTTCTTGAACTACAAAACCACAATTATACACGAGCCCCGCGCCAAACGAAGCTTGGC
                      ____________________________________________________________
consensus CAGGTTCTTGAACTACAAAACCACAATTATACACGAGCCCCGCGCCAAACGAAGCTTGGC
 
. : . : . : . : . : . :
rJMFF030C13- ACAAGAAGCTGTTCTGATCTGTCTGCATCACAGTTCAAGTTGATAATGCACTGGTTTTTA
rJMSF017L08- ACAAGAAGCTGTTCTGATCTGTCTGCATCACAGTTCAAGTTGATAATGCACTGGTTTTTA
                      ____________________________________________________________
consensus ACAAGAAGCTGTTCTGATCTGTCTGCATCACAGTTCAAGTTGATAATGCACTGGTTTTTA
 
. : . : . : . : . : . :
rJMFF030C13- TGGTTTATTAGTGTGGGGGGCGGGGAGAAAAAAACACAGAACAACAATAAATTAGAGGGG
rJMSF017L08- TGGTTTATTAGTGTGGGGGGCGGGGAGAAAAAAACACAGAACAACAATAAATTAGAGGGG
                      ____________________________________________________________
consensus TGGTTTATTAGTGTGGGGGGCGGGGAGAAAAAAACACAGAACAACAATAAATTAGAGGGG
 
. : . : . : . : . : . :
rJMFF030C13- TGGTAGGGTGCTATCTAGGGCAACCAACCTTTGCAGGACCACCTTGCTGAAAAGGGGGTG
rJMSF017L08- TGGTAGGGTGCTATCTAGGGCAACCAACCTTTGCAGGACCACCTTGCTGAAAAGGGGGTG
                      ____________________________________________________________
consensus TGGTAGGGTGCTATCTAGGGCAACCAACCTTTGCAGGACCACCTTGCTGAAAAGGGGGTG
 
. : . : . : . : . : . :
rJMFF030C13- GTCCGGGATCACATAACTAGCTCCATACTGGCTGTTGCAGCTGCTTCGGGGTGGTACTGG
rJMSF017L08- GTCCGGGATCACATAACTAGCTCCATACTGGCTGTTGCAGCCGCTTCGGGGTGGTACTGG
                      ____________________________________________________________
consensus GTCCGGGATCACATAACTAGCTCCATACTGGCTGTTGCAGCTGCTTCGGGGTGGTACTGG
 
. : . : . : . : . : . :
rJMFF030C13- ATGATCTCGGCCCACATCATTTCTCTGATCATACCTTCCCCCATATCCTCATCAATGTCA
rJMSF017L08- ATGATCTCGGCCCACATCATTTCTCTGATCATACCTTCCCCCATATCCTCATCAATGTCA
                      ____________________________________________________________
consensus ATGATCTCGGCCCACATCATTTCTCTGATCATACCTTCCCCCATATCCTCATCAATGTCA
 
. : . : . : . : . : . :
rJMFF030C13- AGGTTTATTGGGACCTGAGCTGGTGGGTCGTGATTAGGATCATATAGTGGAGACATGTAA
rJMSF017L08- AGGTTTATTGGGACCTGAGCTGGTGGGTCGTGATTAGGATCATATAGTGGAGACATGTAA
                      ____________________________________________________________
consensus AGGTTTATTGGGACCTGAGCTGGTGGGTCGTGATTAGGATCATATAGTGGAGACATGTAA
 
. : . : . : . : . : . :
rJMFF030C13- GGGTGGTGAAGTGCTTCAGTAACACTGATCCTCTTTGAAGGGTCAAAAACGAGCATCTTC
rJMSF017L08- GGGTGGTGAAGTGCTTCAGTAACACTGATCCTCTTTGAAGGGTCAAAAACGAGCATCTTC
                      ____________________________________________________________
consensus GGGTGGTGAAGTGCTTCAGTAACACTGATCCTCTTTGAAGGGTCAAAAACGAGCATCTTC
 
. : . : . : . : . : . :
rJMFF030C13- TGCAGCAGATCAATTGCCAGAGGATGGGCTTGGGGATAAAGATGGGATAACGGTCTTCCA
rJMSF017L08- TGCAGCAGATCAATTGCCAGAGGATGGGCTTGGGGATAAAGATGGGATAACGGTCTTCCA
                      ____________________________________________________________
consensus TGCAGCAGATCAATTGCCAGAGGATGGGCTTGGGGATAAAGATGGGATAACGGTCTTCCA
 
. : . : . : . : . : . :
rJMFF030C13- TGAGAGTATGGGAGGGCTTTGATGTAATTTCTTGCCTTAGGGTTATCAATGAACTTGATA
rJMSF017L08- TGAGAGTATGGGAGGGCTTTGATGTAATTTCTTGCCTTAGGGTTATCAATGAACTTGATA
                      ____________________________________________________________
consensus TGAGAGTATGGGAGGGCTTTGATGTAATTTCTTGCCTTAGGGTTATCAATGAACTTGATA
 
. : . : . : . : . : . :
rJMFF030C13- TCCTCTTCCCTTTGGCTACCAAGGATGTTGATAATCAATTTAAGTTGGTTAAGGCATTCT
rJMSF017L08- TCCTCTTCCCTTTGGCTACCAAGGATGTTGATAATCAATTTAAGTTGGTTAAGGCATTCT
JMFS167H10+ AATTTAAGTTGGTTAAGGCATTCT
                      ____________________________________________________________
consensus TCCTCTTCCCTTTGGCTACCAAGGATGTTGATAATCAATTTAAGTTGGTTAAGGCATTCT
 
. : . : . : . : . : . :
rJMFF030C13- GTACCGGGG
rJMSF017L08- GTACCGGGGAAGATTGGTTTCCTTCCCAGCAATTCGGCAAATATGCAGCCNACAGACCAG
JMFS167H10+ GTACCGGGGAAGATTGGTTTCCTTCCCAGCAATTCGGCAAATATGCAGCCAACAGACCAG
                      ____________________________________________________________
consensus GTACCGGGGAAGATTGGTTTCCTTCCCAGCAATTCGGCAAATATGCAGCCAACAGACCAG
 
. : . : . : . : . : . :
rJMSF017L08- ACATCGATAGAAGTTCCATAATGATCACAGCA
JMFS167H10+ ACATCGATAGAAGTTCCATAATGATCACAGCAGAGGAGCAGTTCTGGTGCACGGTACCAA
                      ____________________________________________________________
consensus ACATCGATAGAAGTTCCATAATGATCACAGCAGAGGAGCAGTTCTGGTGCACGGTACCAA
 
. : . : . : . : . : . :
JMFS167H10+ CGTGTAACAACATATTCAGTCATAAACTGGCTCTTACTGCTGCTTGTACGTGCAAGTCCA
                      ____________________________________________________________
consensus CGTGTAACAACATATTCAGTCATAAACTGGCTCTTACTGCTGCTTGTACGTGCAAGTCCA
 
. : . : . : . : . : . :
JMFS167H10+ AAATCACATATTTTAAGATCACAGTTTGCATTAATGAGTAGGTTCCCGGGCTTCAAGTCA
                      ____________________________________________________________
consensus AAATCACATATTTTAAGATCACAGTTTGCATTAATGAGTAGGTTCCCGGGCTTCAAGTCA
 
. : . : . : . : . : . :
JMFS167H10+ CGATGAAGAATATTTGCGGAGTGTAGATATTTCAGACCCCGAAGCAACTGGAACAAGAAG
                      ____________________________________________________________
consensus CGATGAAGAATATTTGCGGAGTGTAGATATTTCAGACCCCGAAGCAACTGGAACAAGAAG
 
. : . : . : . : . : . :
JMFS167H10+ TATTGGCAATGGTCATTTGAAAGCCCCTGAGACGACTTGATAATCTGATGCAAATCTGTG
                      ____________________________________________________________
consensus TATTGGCAATGGTCATTTGAAAGCCCCTGAGACGACTTGATAATCTGATGCAAATCTGTG
 
. : . : . : . : . : . :
JMFS167H10+ TCCATAAGTTCATAAACGAGATAAACATCTTTGAAACTACTCCTCTGGATAGGCATCATG
                      ____________________________________________________________
consensus TCCATAAGTTCATAAACGAGATAAACATCTTTGAAACTACTCCTCTGGATAGGCATCATG
 
. : . : . : . : . : . :
JMFS167H10+ ACATCTTTCAAAGCAATAACATTTTCATGTTTAAGATGGCGAAGAAGTTTTAGTTCACGC
                      ____________________________________________________________
consensus ACATCTTTCAAAGCAATAACATTTTCATGTTTAAGATGGCGAAGAAGTTTTAGTTCACGC
 
. : . : . : . : . : . :
JMFS167H10+ AATGTTCTCAGTGCATCAACACGATTCTCAAAAGCATTATGTATCCTCTTGATGGCAACC
                      ____________________________________________________________
consensus AATGTTCTCAGTGCATCAACACGATTCTCAAAAGCATTATGTATCCTCTTGATGGCAACC
 
. : . : . : . : . : . :
JMFS167H10+ TTTTCATTGGTTTCCCTGTTGATAGAGGAGCAGACAATGCCATAGGCCCCTCGACCTATA
JMFF030C13+ CTGTTGATAGAGGAGCAGACAATGCCATAGGCCCCTCGACCTATA
                      ____________________________________________________________
consensus TTTTCATTGGTTTCCCTGTTGATAGAGGAGCAGACAATGCCATAGGCCCCTCGACCTATA
 
. : . : . : . : . : . :
JMFS167H10+ GGC
JMFF030C13+ GGCTTGATTGGAACATATTTGGTATCAATCTCGAACAAGGTTTGCCACATAGAAAAATAA
                      ____________________________________________________________
consensus GGCTTGATTGGAACATATTTGGTATCAATCTCGAACAAGGTTTGCCACATAGAAAAATAA
 
. : . : . : . : . : . :
JMFF030C13+ TGCTTCCCTGGGGCTCTAATGCCGTTTGGAGGCTCAACAGGTGTTGCCATTCCTTTTGGA
                      ____________________________________________________________
consensus TGCTTCCCTGGGGCTCTAATGCCGTTTGGAGGCTCAACAGGTGTTGCCATTCCTTTTGGA
 
. : . : . : . : . : . :
JMFF030C13+ CTGCAATTTCCCAAAAATTTGCTTTTGCTCTGATCACTTCACTACTACTCTCCCCAATTC
JMSF017L08+ ATTTCCCAAAAATTTGCTTTTGCTCTGATCACTTCACTACTACTCTCCCCAATTC
                      ____________________________________________________________
consensus CTGCAATTTCCCAAAAATTTGCTTTTGCTCTGATCACTTCACTACTACTCTCCCCAATTC
 
. : . : . : . : . : . :
JMFF030C13+ CATCCCAAAAGCCAATTTCCACCCCAATTTTTCATCAAATTCTCCACACTATTTCATGAA
JMSF017L08+ CATCCCAAAAGCCAATTTCCACCCCAATTTTTCATCAAATTCTCCACACTATTTCATGAA
                      ____________________________________________________________
consensus CATCCCAAAAGCCAATTTCCACCCCAATTTTTCATCAAATTCTCCACACTATTTCATGAA
 
. : . : . : . : . : . :
JMFF030C13+ ATTCAACCTTCACCACCTTTTTCTAACAATTCTCCATCTTTCCAAGCCAAAACCCGGGGC
JMSF017L08+ ATTCAACCTTCACCACCTTTTTCTAACAATTCTCCATCTTTCCAAGCCAAAACCCGGGGC
                      ____________________________________________________________
consensus ATTCAACCTTCACCACCTTTTTCTAACAATTCTCCATCTTTCCAAGCCAAAACCCGGGGC
 
. : . : . : . : . : . :
JMFF030C13+ AGTTCAATTGGATACCAGGCGGATCTTATTGAATCAGAAAAAGAAAGATCCGGATTACGT
JMSF017L08+ AGTTCAATTGGATACCAGGCGGATCTTATTGAATCAGAAAAAGAAAGATCCGGATTACGT
                      ____________________________________________________________
consensus AGTTCAATTGGATACCAGGCGGATCTTATTGAATCAGAAAAAGAAAGATCCGGATTACGT
 
. : . : . : . : . : . :
JMFF030C13+ TGCACTCACATTTCATCGATCTCA
JMSF017L08+ TGCACTCACATTTCATCGATCTCACAGTAAATTGGGAAATTCAATAAATCAAGATAATAT
                      ____________________________________________________________
consensus TGCACTCACATTTCATCGATCTCACAGTAAATTGGGAAATTCAATAAATCAAGATAATAT
 
. : . : . : . : . : . :
JMSF017L08+ AATCATTAATACACACNGTATGGGATACAGAGTAGATATCTCTGTCAACGAAAAGATCTC
                      ____________________________________________________________
consensus AATCATTAATACACACNGTATGGGATACAGAGTAGATATCTCTGTCAACGAAAAGATCTC
 
. : . : . : . : . : . :
JMSF017L08+ TCTCTCCCTCTCTCTCTCTCTCTCTCTCAAATTGCTTGATTCGTTATCCTGTCGCGAGCC
                      ____________________________________________________________
consensus TCTCTCCCTCTCTCTCTCTCTCTCTCTCAAATTGCTTGATTCGTTATCCTGTCGCGAGCC