Contig 013317:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008K19Sequence549013317 (5)ref|XP_009758209.1|1e-44PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri650009662 (5)ref|XP_009758209.1|6e-61PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri
JMFF014P07Sequence573013317 (5)ref|XP_009631029.1|2e-36PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana tomentosi653009662 (5)ref|XP_009758209.1|7e-60PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri
JMFF018L02Sequence580013317 (5)ref|XP_009758209.1|4e-45PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri253009662 (5)ref|XP_009608371.1|2e-06PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana tomentosi
JMSF017D21Sequence261013317 (5)724009662 (5)emb|CDP17860.1|3e-63unnamed protein product [Coffea canephora]
JMSF027G21Sequence653013317 (5)ref|XP_009631025.1|2e-38PREDICTED: WD repeat-containing protein 26-like isoform X1 [Nicotiana tomentosi776009662 (5)ref|XP_009758209.1|5e-115PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF008K19+ CTATGCAATGTGATTACACTTTCATCCCATTTCCCATCGAGGATTTGCTG
JMFF018L02+ CCAAGTCTATGCAATGTGATTACACTTTCATCCCATTTCCCATCGAGGATTTGCTG
JMFF014P07+ CGAGGATTTGCTG
JMSF027G21+ TTTCCCATCGAGGATTTGCTG
                      ____________________________________________________________
consensus CCAAGTCTATGCAATGTGATTACACTTTCATCCCATTTCCCATCGAGGATTTGCTG
 
. : . : . : . : . : . :
JMFF008K19+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
JMFF018L02+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
JMFF014P07+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
JMSF027G21+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
                      ____________________________________________________________
consensus CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
 
. : . : . : . : . : . :
JMFF008K19+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
JMFF018L02+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
JMFF014P07+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
JMSF027G21+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
                      ____________________________________________________________
consensus CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
 
. : . : . : . : . : . :
JMFF008K19+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
JMFF018L02+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
JMFF014P07+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
JMSF027G21+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
                      ____________________________________________________________
consensus TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
 
. : . : . : . : . : . :
JMFF008K19+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
JMFF018L02+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
JMFF014P07+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
JMSF027G21+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
                      ____________________________________________________________
consensus AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
 
. : . : . : . : . : . :
JMFF008K19+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
JMFF018L02+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
JMFF014P07+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
JMSF027G21+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
                      ____________________________________________________________
consensus GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
 
. : . : . : . : . : . :
JMFF008K19+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
JMFF018L02+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
JMFF014P07+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
JMSF027G21+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
                      ____________________________________________________________
consensus CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
 
. : . : . : . : . : . :
JMFF008K19+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTC
JMFF018L02+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTC
JMFF014P07+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTC
JMSF027G21+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTCCCAGACAGTGATTTCAAGTA
                      ____________________________________________________________
consensus ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTCCCAGACAGTGATTTCAAGTA
 
. : . : . : . : . : . :
JMSF027G21+ TCCGAGCAAAGCAGATGCCAAAAATGGGGGAAATGTAAGTGAAATGAAAAGGGGAAAACT
                      ____________________________________________________________
consensus TCCGAGCAAAGCAGATGCCAAAAATGGGGGAAATGTAAGTGAAATGAAAAGGGGAAAACT
 
. : . : . : . : . : . :
JMSF027G21+ TGTGTGTGTAAGATTACACTTGATTCTGTGGGCGACTTGATTGATGCTTGGCTATCTAAA
JMSF017D21+ CACTTGATTCTGTGGGCGACTTGATTGATGCTTGGCTATCTAAA
                      ____________________________________________________________
consensus TGTGTGTGTAAGATTACACTTGATTCTGTGGGCGACTTGATTGATGCTTGGCTATCTAAA
 
. : . : . : . : . : . :
JMSF027G21+ TATCCGTAAATGGCATAGTCTCTAAGAAAAATGATTCTTGATAATGGCGGTAGGGTGGGG
JMSF017D21+ TATCCGTAAATGGCATAGTCTCTAAGAAAAATGATTCTTGATAATGGCGGTAGGGTGGGG
                      ____________________________________________________________
consensus TATCCGTAAATGGCATAGTCTCTAAGAAAAATGATTCTTGATAATGGCGGTAGGGTGGGG
 
. : . : . : . : . : . :
JMSF027G21+ CAAGGGATTTGGAAAGAAGATGGAAGAAAGT
JMSF017D21+ CAAGGGATTTGGAAAGAAGATGGAAGAAAGTGAACCGTGGATTACAATTTTCTATTCATC
                      ____________________________________________________________
consensus CAAGGGATTTGGAAAGAAGATGGAAGAAAGTGAACCGTGGATTACAATTTTCTATTCATC