clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF008P11 | Sequence | 229 | 013304 (2) | gb|EPS57364.1| | 5e-10 | hypothetical protein M569_17454, partial [Genlisea aurea] | 783 | 019232 | ref|XP_008458779.1| | 6e-99 | PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Cucu |
JMSF015H17 | Sequence | 497 | 013304 (2) | ref|XP_009766718.1| | 2e-50 | PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Nico | 797 | 021417 | ref|XP_002277200.1| | 2e-142 | PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Viti |
This contig is upended
. : . : . : . : . : . :
JMSF015H17+ GTTATAGTCTCTCCAGT
____________________________________________________________
consensus GTTATAGTCTCTCCAGT
. : . : . : . : . : . :
JMSF015H17+ TGCAGTTAATAACGTCTTCCGCTTCACAGCAGCTGACTTAACCCGAGTTCCTAGAACCAA
____________________________________________________________
consensus TGCAGTTAATAACGTCTTCCGCTTCACAGCAGCTGACTTAACCCGAGTTCCTAGAACCAA
. : . : . : . : . : . :
JMSF015H17+ TTCAATACCATGTTCTTTGTACCATTTTGGTGTTAACCTCTGCTCATTAGTACCTACGCA
____________________________________________________________
consensus TTCAATACCATGTTCTTTGTACCATTTTGGTGTTAACCTCTGCTCATTAGTACCTACGCA
. : . : . : . : . : . :
JMSF008P11+ AATGC
JMSF015H17+ ACAGTGAAATGCATTGATACGTGCAGGAGCTTCTGGAAGTATATATCCTTTGCTCAATGC
____________________________________________________________
consensus ACAGTGAAATGCATTGATACGTGCAGGAGCTTCTGGAAGTATATATCCTTTGCTCAATGC
. : . : . : . : . : . :
JMSF008P11+ AGGCCTTTCATAAGGTGCAACAGGTTCTTCAGAGATGATGCAGAGTTCACCGGGAGACAC
JMSF015H17+ AGGCCTTTCATATGGTGCAACAGTTTCTTCGGAGATGATGCAAAGTTCGCCGGGAGAGAC
____________________________________________________________
consensus AGGCCTTTCATATGGTGCAACAGTTTCTTCGGAGATGATGCAGAGTTCGCCGGGAGAGAC
. : . : . : . : . : . :
JMSF008P11+ GCTTCTCTTCACGAATTCATGGGCAGCATGACCTGCTGCCACTCCTCCCCCTACGATCAC
JMSF015H17+ GCCTCTCTTCACGAATTCATGGGCTGCATACCCAGCTGCCACTCCTCCGCCGACTATCAC
____________________________________________________________
consensus GCTTCTCTTCACGAATTCATGGGCTGCATGCCCTGCTGCCACTCCTCCGCCTACTATCAC
. : . : . : . : . : . :
JMSF008P11+ ATACACAAACGCCCTTCCCAT
JMSF015H17+ ATACAGAAACGCCCTTCCCATTTGAATTAATGAATTGATTAATTACCAAATTAATGAATT
____________________________________________________________
consensus ATACAGAAACGCCCTTCCCATTTGAATTAATGAATTGATTAATTACCAAATTAATGAATT
. : . : . : . : . : . :
JMSF015H17+ AATAATAATAATATTATTGATTGATTATATCATCCAGATTCCAGGCAGCAAGTAAAAGTG
____________________________________________________________
consensus AATAATAATAATATTATTGATTGATTATATCATCCAGATTCCAGGCAGCAAGTAAAAGTG
. : . : . : . : . : . :
JMSF015H17+ TAAAACCCTCCCGCTCTTTCTTCCCCTTCGCAGTGGACAAACAAATTTGAACACGATACC
____________________________________________________________
consensus TAAAACCCTCCCGCTCTTTCTTCCCCTTCGCAGTGGACAAACAAATTTGAACACGATACC