Contig 013301:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036C23Sequence550013301 (3)ref|XP_011071763.1|2e-47PREDICTED: lipase-like PAD4 [Sesamum indicum]754008381 (3)ref|XP_009613989.1|2e-56PREDICTED: lipase-like PAD4 [Nicotiana tomentosiformis]
JMFF048P13Sequence414013301 (3)ref|XP_011071763.1|2e-24PREDICTED: lipase-like PAD4 [Sesamum indicum]366008381 (3)
JMSF014K15Sequence448013301 (3)ref|XP_011071763.1|2e-28PREDICTED: lipase-like PAD4 [Sesamum indicum]769008381 (3)ref|XP_009613989.1|1e-48PREDICTED: lipase-like PAD4 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF036C23+                                                    CCAGATCGCTGCAAGTATG
                      ____________________________________________________________
consensus                                                      CCAGATCGCTGCAAGTATG
 
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JMFF036C23+           GCTACAGAACCACCCGATGAGTGCCCTGTAAAAACTATTTGCTTTCCATCTGATACCGCC
                      ____________________________________________________________
consensus             GCTACAGAACCACCCGATGAGTGCCCTGTAAAAACTATTTGCTTTCCATCTGATACCGCC
 
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JMFF036C23+           TTCTGCACCTCAGAAGAGAGTGATGTTTTCCCCAAGAGCTCCTCAAATCTGGCAGAAAAC
JMFF048P13+                                                                   AAAC
JMSF014K15+                                           CAAGAGCTCCTCAAATCTGGCAGAAAAC
                      ____________________________________________________________
consensus             TTCTGCACCTCAGAAGAGAGTGATGTTTTCCCCAAGAGCTCCTCAAATCTGGCAGAAAAC
 
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JMFF036C23+           GCAGCATTCACCACGGCAACCTCGTCAGTGCCGATACTCTTGAGAAAGCGAAACAACGCA
JMFF048P13+           GCAGCATTCACCACGGCAACCTCGTCAGTGCCGATACTCTTGAGAAAGCGAAACAACGCA
JMSF014K15+           GCAGCATTCACCACGGCAACCTCGTCAGTGCCGATACTCTTGAGAAAGCGAAACAACGCA
                      ____________________________________________________________
consensus             GCAGCATTCACCACGGCAACCTCGTCAGTGCCGATACTCTTGAGAAAGCGAAACAACGCA
 
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JMFF036C23+           GTATTAACCTTGGTCTCTCCGAAGGGCTTGTGGCTGTACCAATCGCCCACAGCCCACAAC
JMFF048P13+           GTATTAACCTTGGTCTCTCCGAAGGGCTTGTGGCTGTACCAATCGCCCACAGCCCACAAC
JMSF014K15+           GTATTAACCTTGGTCTCTCCGAAGGGCTTGTGGCTGTACCAATCGCCCACAGCCCACAAC
                      ____________________________________________________________
consensus             GTATTAACCTTGGTCTCTCCGAAGGGCTTGTGGCTGTACCAATCGCCCACAGCCCACAAC
 
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JMFF036C23+           CCCGGAAAGGCGAAGATCGCATAGTTTGAGCTTTGGCTCTTCTCGTACAGATAAGGCTTC
JMFF048P13+           CCCGGAAAGGCGAAGATCGCATAGTTTGAGCTTTGGCTCTTCTCGTACAGATAAGGCTTC
JMSF014K15+           CCCGGAAAGGCGAAGATCGCATAGTTTGAGCTTTGGCTCTTCTCGTACAGATAAGGCTTC
                      ____________________________________________________________
consensus             CCCGGAAAGGCGAAGATCGCATAGTTTGAGCTTTGGCTCTTCTCGTACAGATAAGGCTTC
 
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JMFF036C23+           CCTGGGAACTTGTCATGAGCTTTCATGGAGAAACTGCAGGCTTTCTTGATTAGATCTTCT
JMFF048P13+           CCTGGGAACTTGTCATGAGCTTTCATGGAGAAACTGCAGGCTTTCTTGATTAGATCTTCT
JMSF014K15+           CCTGGGAACTTGTCATGAGCTTTCATGGAGAAACTGCAGGCTTTCTTGATTAGATCTTCT
                      ____________________________________________________________
consensus             CCTGGGAACTTGTCATGAGCTTTCATGGAGAAACTGCAGGCTTTCTTGATTAGATCTTCT
 
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JMFF036C23+           CTCAGCTCTAACCTCTCCCCCAGAGACCTTCTCCCATCCATCTTTCTTGATGATATGTTT
JMFF048P13+           CTCAGCTCTAACCTCTCCCCCAGAGACCTTCTCCCATCCATCTTTCTTGATGATATGTTT
JMSF014K15+           CTCAGCTCTAACCTCTCCCCCAGAGACCTTCTCCCATCCATCTTTCTTGATGATATGTTT
                      ____________________________________________________________
consensus             CTCAGCTCTAACCTCTCCCCCAGAGACCTTCTCCCATCCATCTTTCTTGATGATATGTTT
 
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JMFF036C23+           GTTTAATTTCCAGATGGGTAAGGTTTCTTCACTTCTTGGAGGGGTTTTGGGAGCTAGGAG
JMFF048P13+           GTTTAATTTCCAGATGGGTAAGGTTTCTTCACTTCTTGGAGGGGTTTTGGGAGCTAGGAG
JMSF014K15+           GTTTAATTTCCAGATGGGTAAGGTTTCTTCACTTCTTGGAGGGGTTTTGGGAGCTAGGAG
                      ____________________________________________________________
consensus             GTTTAATTTCCAGATGGGTAAGGTTTCTTCACTTCTTGGAGGGGTTTTGGGAGCTAGGAG
 
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JMFF036C23+           AAGAGTAAAGATGTGCAGAAAAATGGTGTGGATAGATGAAAGCATATAATT         
JMFF048P13+           AAGAGTAAAGATGTGCAGAAAAATGGTG-GGATAGATGAAAGCATATAATT         
JMSF014K15+           AAGAGTAAAGATGTGCAGAAAAATGGTGTGGATAGATGAAAGCATATAATTAGACATCAA
                      ____________________________________________________________
consensus             AAGAGTAAAGATGTGCAGAAAAATGGTGTGGATAGATGAAAGCATATAATTAGACATCAA