| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012B01 | Sequence | 482 | 013284 (3) | gb|EYU21218.1| | 1e-11 | hypothetical protein MIMGU_mgv1a003772mg [Erythranthe guttata] | 678 | 014131 (3) | ref|XP_009803446.1| | 1e-55 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like, partial [N |
| JMSF046E24 | Sequence | 719 | 013284 (3) | ref|XP_009803447.1| | 7e-85 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Nicotiana | 765 | 014131 (3) | ref|XP_009803446.1| | 9e-80 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like, partial [N |
| JMSF052A12 | Sequence | 704 | 013284 (3) | ref|XP_009803447.1| | 5e-62 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Nicotiana | 812 | 014131 (3) | ref|XP_009803446.1| | 5e-89 | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like, partial [N |
This contig is upended
. : . : . : . : . : . :
JMSF046E24+ TCATCCATACCCATGA
____________________________________________________________
consensus TCATCCATACCCATGA
. : . : . : . : . : . :
JMSF046E24+ TATAAAGTGTATCAAGAGCATCTATTAAAGTTGCTCCAAGGCCACCGAAACTGTCAACCC
____________________________________________________________
consensus TATAAAGTGTATCAAGAGCATCTATTAAAGTTGCTCCAAGGCCACCGAAACTGTCAACCC
. : . : . : . : . : . :
JMSF046E24+ CATTCTTCGATTGTGGCTGAAGTTCATCATGACCCCATGCGTACTTTTCATATGAACTCC
JMSF052A12+ GCTGAAGTTCATCATGACCCCATGCGTACTTTTCATATGAACTCC
____________________________________________________________
consensus CATTCTTCGATTGTGGCTGAAGTTCATCATGACCCCATGCGTACTTTTCATATGAACTCC
. : . : . : . : . : . :
JMSF046E24+ AGGCATGGCGCATGGCGTCTTTTACTTTCTCTCTTCTCTCAGCATCAAGTGGTTCATCTA
JMSF052A12+ AGGCATGGCGCATGGCGTCTTTTACTTTCTCTCTTCTCTCAGCATCAAGTGGTTCATCTA
____________________________________________________________
consensus AGGCATGGCGCATGGCGTCTTTTACTTTCTCTCTTCTCTCAGCATCAAGTGGTTCATCTA
. : . : . : . : . : . :
JMSF046E24+ TGTCATCTCTTTTTTTAGTTGCATCATCACTTTTGATACTTGATTTTATCTTTTCATCTG
JMSF052A12+ TGTCATCTCTTTTTTTAGTTGCATCATCACTTTTGATACTTGATTTTATCTTTTCATCTG
____________________________________________________________
consensus TGTCATCTCTTTTTTTAGTTGCATCATCACTTTTGATACTTGATTTTATCTTTTCATCTG
. : . : . : . : . : . :
JMSF046E24+ GAACTACTCGACCACTCTTTAGTTCTTCCACCAAATGTTGTAACTGAGTCACTTGATCAT
JMSF052A12+ GAACTACTCGACCACTCTTTAGTTCTTCCACCAAATGTTGTAACTGAGTCACTTGATCAT
____________________________________________________________
consensus GAACTACTCGACCACTCTTTAGTTCTTCCACCAAATGTTGTAACTGAGTCACTTGATCAT
. : . : . : . : . : . :
JMSF046E24+ TCAACTGAGAGATCTCCATCTCGTGCTCGCGGACTAACGTTTGACGGTCCCAAAAGAAGA
JMSF052A12+ TCAACTGAGAGATCTCCATCTCGTGCTCGCGGACTAACGTTTGCCGGTCCCAAAAGAAGA
JMSF012B01+ GA
____________________________________________________________
consensus TCAACTGAGAGATCTCCATCTCGTGCTCGCGGACTAACGTTTGCCGGTCCCAAAAGAAGA
. : . : . : . : . : . :
JMSF046E24+ AGGAGCAACAAACGAAAATGATAAAGAGCAAAGCCAGACGCTTCGGTCGTTTCAGATAGT
JMSF052A12+ AGGAGCAACAAACGAAAATGATAAAGAGCAAAGCCAGACGCTTCGGTCGTTTCAGATAGT
JMSF012B01+ AGGAGCANCAAACGAAAATGATAAAGAGCAAAGCCAGACGCTTCGGTCGTTTCAGATAGT
____________________________________________________________
consensus AGGAGCAACAAACGAAAATGATAAAGAGCAAAGCCAGACGCTTCGGTCGTTTCAGATAGT
. : . : . : . : . : . :
JMSF046E24+ ACGCCGGATTAATGTACCTCCATTTGCTCAACGACGATCTGCTCCGCGCCATTTGATTGC
JMSF052A12+ ACGCCGGATTAATGTACCTCCATTTGCTCAACGACGATCTGCTCCGCGCCATTTGATTGC
JMSF012B01+ ACGCCGGATTAATGTACCTCCATTTGCTCAACGACGATCTGCTCCGCGCCATTTGATTGC
____________________________________________________________
consensus ACGCCGGATTAATGTACCTCCATTTGCTCAACGACGATCTGCTCCGCGCCATTTGATTGC
. : . : . : . : . : . :
JMSF046E24+ GCTTCTCGCCAAGGGAAAATAGTTAATCTTTCAACAGTGATTTGATGTTATTGTTACCGG
JMSF052A12+ GCTTCTCGCCAAGGGAAAATAGTTAATCTTTCAACAGTGATTTGATGTTATTGTTACCGG
JMSF012B01+ GCTTCTCGCCAAGGGAAAATAGTTAATCTTTCAACAGTGATTTGATGTTATTGTTACCGG
____________________________________________________________
consensus GCTTCTCGCCAAGGGAAAATAGTTAATCTTTCAACAGTGATTTGATGTTATTGTTACCGG
. : . : . : . : . : . :
JMSF046E24+ CATGGATTAGAAGCATAAACAGTGGGAAATTGAATCGGAAATTGTGGGGAATTTTGGATC
JMSF052A12+ CATGGATTAGAAGCATAAACAGTGGGAAATTGAATCGGAAATTGTGGGGAATTTTGGATC
JMSF012B01+ CATGGATTAGAAGCATAAACAGTGGGAAATTGAATCGGAAATTGTGGGGAATTTTGGATC
____________________________________________________________
consensus CATGGATTAGAAGCATAAACAGTGGGAAATTGAATCGGAAATTGTGGGGAATTTTGGATC
. : . : . : . : . : . :
JMSF046E24+ AATTGAACGAGGAGAAAGATCTGGGTGCGATCCCCTCCCTCTCTCCCTCTGTGGTTACCC
JMSF052A12+ AATTGAACGAGGAGAAAGATCTGGGTGCGATCCCCTCCCTCTCTCCCTCTGTGGTTACCC
JMSF012B01+ AATTGAACGAGGAGAAAGATCTGGGTGCGATCCCCTCCCTCTCTCCCTCTGTGGTTACCC
____________________________________________________________
consensus AATTGAACGAGGAGAAAGATCTGGGTGCGATCCCCTCCCTCTCTCCCTCTGTGGTTACCC
. : . : . : . : . : . :
JMSF046E24+ TACGATTCTGAGTTGTGACAAGCAGTGAAATGGGAGGAGGAC
JMSF052A12+ TACGATTCTGAGTTGTGACAAGCAGTGAAATGGGAGGAGGACGAAGAACCGAAGACGAAT
JMSF012B01+ TACGATTCTGAGTTGTGACAAGCAGTGAAATGGGAGGAGGACGAAGAACCGAAGACGAAT
____________________________________________________________
consensus TACGATTCTGAGTTGTGACAAGCAGTGAAATGGGAGGAGGACGAAGAACCGAAGACGAAT
. : . : . : . : . : . :
JMSF052A12+ GACCAAAACAAAGTCAAGGTGGCGTACCCTGCCCGTCTCGCCACTACCAGACGACGT
JMSF012B01+ GACCAAAACAAAGTCAAGGTGGCGTACCCTGCCCGTCTCGCCACTACCAGACGACGTTAG
____________________________________________________________
consensus GACCAAAACAAAGTCAAGGTGGCGTACCCTGCCCGTCTCGCCACTACCAGACGACGTTAG
. : . : . : . : . : . :
JMSF012B01+ TTGGCAGGTTGCTGGGCCGCTGAATGAGTAATTGCGGTGTTCTCTCTCATTCTCACTCCC
____________________________________________________________
consensus TTGGCAGGTTGCTGGGCCGCTGAATGAGTAATTGCGGTGTTCTCTCTCATTCTCACTCCC