| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS026A07 | Sequence | 635 | 013283 (7) | emb|CDP22009.1| | 2e-75 | unnamed protein product, partial [Coffea canephora] | |||||
| JMFS059H10 | Sequence | 624 | 013283 (7) | emb|CDP22009.1| | 1e-95 | unnamed protein product, partial [Coffea canephora] | |||||
| JMSF009E10 | Sequence | 465 | 013283 (7) | emb|CDP22009.1| | 1e-66 | unnamed protein product, partial [Coffea canephora] | 781 | 013909 (4) | ref|XP_006483058.1| | 3e-80 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] |
| JMSF011P15 | Sequence | 197 | 013283 (7) | 761 | 013909 (4) | ref|XP_006483058.1| | 1e-55 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] | |||
| JMSF015N16 | Sequence | 438 | 013283 (7) | emb|CDP22009.1| | 2e-60 | unnamed protein product, partial [Coffea canephora] | 814 | 013909 (4) | ref|XP_006483058.1| | 5e-84 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] |
| JMSF028N10 | Sequence | 686 | 013283 (7) | emb|CDP22009.1| | 6e-117 | unnamed protein product, partial [Coffea canephora] | 763 | 013909 (4) | ref|XP_006483058.1| | 6e-58 | PREDICTED: probable inactive purple acid phosphatase 2-like [Citrus sinensis] |
| JMSF038M01 | Sequence | 588 | 013283 (7) | emb|CDP22009.1| | 4e-70 | unnamed protein product, partial [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF028N10+ TCACAAAAGAGTAAGTTG
____________________________________________________________
consensus TCACAAAAGAGTAAGTTG
. : . : . : . : . : . :
JMSF028N10+ GGCTCCAACCTCCTCCATCACTGCCAACCTTATAATAATATCTCTTCCCTTTGGTCAAAT
____________________________________________________________
consensus GGCTCCAACCTCCTCCATCACTGCCAACCTTATAATAATATCTCTTCCCTTTGGTCAAAT
. : . : . : . : . : . :
JMSF028N10+ TGGTCATCACACCATCATGTATATACCCAGGATCTCTCCACCCAACACTGTGATTAGCCG
JMFS059H10+ AGGATCTCTCCACCCAACACTGTGATTAGCCG
____________________________________________________________
consensus TGGTCATCACACCATCATGTATATACCCAGGATCTCTCCACCCAACACTGTGATTAGCCG
. : . : . : . : . : . :
JMSF028N10+ GAGTATCACACATATGCTCTTTCTCGTACCTCCCTACCTCGGTACCCACCACATGATCCA
JMFS059H10+ GAGTATCACACATATGCTCTTTCTCGTACCTCCCTACCTCGGTACCCACCACATGATCCA
JMFS026A07+ CCA
____________________________________________________________
consensus GAGTATCACACATATGCTCTTTCTCGTACCTCCCTACCTCGGTACCCACCACATGATCCA
. : . : . : . : . : . :
JMSF028N10+ GATTCCCCCGGGTCAACCCGTATCTCACAGAATTCTCCTTCCCATCAGGCGTCACGAACA
JMSF009E10+ GTCACGAACA
JMFS059H10+ GATTCCCCCGGGTCAACCCGTATCTCACAGAATTCTCCTTCCCATCAGGCGTCACGAACA
JMSF038M01+ TCCTTCCCATCAGGCGTCACGAACA
JMFS026A07+ GATTCCCCCGGGTCAACCCGTATCTCACAGAATTCTCCTTCCCATCAGGCGTCACGAACA
____________________________________________________________
consensus GATTCCCCCGGGTCAACCCGTATCTCACAGAATTCTCCTTCCCATCAGGCGTCACGAACA
. : . : . : . : . : . :
JMSF028N10+ TGACACGCATCTCACCCTCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCCCCGCC
JMSF015N16+ TCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCCCCGCC
JMSF009E10+ TGACACGCATCTCACCCTCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCCCCGCC
JMFS059H10+ TGACACGCATCTCACCCTCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCCCCGCC
JMSF038M01+ TGACACGCATCTCACCCTCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCCCCGCC
JMFS026A07+ TGACACGCATCTCACCCTCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCNCCGCC
____________________________________________________________
consensus TGACACGCATCTCACCCTCCCGGCCCGTGACCGCGAGATGGACCTGTTCGGGGCCCCGCC
. : . : . : . : . : . :
JMSF028N10+ CGGGCTCGAACCCGATCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
JMSF015N16+ CGGGCTCGAACCCGAGCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
JMSF009E10+ CGGGCTCGAACCCGAGCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
JMFS059H10+ CGGGCTCGAACCCGATCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
JMSF038M01+ CGGGCTCGAACCCGATCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
JMFS026A07+ CGGGCTCGAACCCGATCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
____________________________________________________________
consensus CGGGCTCGAACCCGATCTCCTCGGACCGCGCCAGCAGGTGCTTGGTCCCGGGCAGCGGGT
. : . : . : . : . : . :
JMSF028N10+ TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
JMSF015N16+ TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
JMSF009E10+ TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
JMFS059H10+ TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
JMSF038M01+ TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
JMFS026A07+ TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
____________________________________________________________
consensus TCTGGTCGTGGTCTTGGTGCTTCAGGTTGATCTCGGAGTCGGTCCATCGGAAGATCCGGA
. : . : . : . : . : . :
JMSF028N10+ ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAATGGAGCCTGATCCGGATTCCC
JMSF015N16+ ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAATGGAGCCTGATCCGGATTCCC
JMSF009E10+ ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAATGGAGCCTGATCCGGATTCCC
JMFS059H10+ ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAATGGAGCCTGATCCGGATTCCC
JMSF038M01+ ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAANGGAGCCTGATCCGGATTCCC
JMFS026A07+ ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAATGGAGCCTGATCCGGATTCCC
____________________________________________________________
consensus ACTGGAACTTGGCCCGGAGGTTGATAAGCGGGAATGAAATGGAGCCTGATCCGGATTCCC
. : . : . : . : . : . :
JMSF028N10+ ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
JMSF015N16+ ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
JMSF009E10+ ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
JMFS059H10+ ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
JMSF038M01+ ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
JMFS026A07+ ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
____________________________________________________________
consensus ATTCAGGCGAAGAAGAAAGGAAGAAGTAGCCGATGAAGTATCTGTTTGACGACTCGGGCG
. : . : . : . : . : . :
JMSF028N10+ GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
JMSF015N16+ GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
JMSF009E10+ GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
JMFS059H10+ GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
JMSF038M01+ GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
JMFS026A07+ GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
____________________________________________________________
consensus GCGAGTAGATCCCAACCCAGTCAAGTTTCGACGGTGAATCAATGGCGGACCATCGGATCG
. : . : . : . : . : . :
JMSF028N10+ TAATTGAGTCGCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
JMSF015N16+ TAATTGAGTCGCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
JMSF009E10+ TAATTGAGTCGCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
JMFS059H10+ TAATTGAGTCGCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
JMSF038M01+ TAATTGAGTCNCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
JMFS026A07+ TAATTGAGTCGCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
JMSF011P15+ GATAGAAACNTCTCCAA
____________________________________________________________
consensus TAATTGAGTCGCCGGATTTTGGTACAGTCTTTGGGGTGACGGAGATAGAAACCTCTCCAA
. : . : . : . : . : . :
JMSF028N10+ AAGAT
JMSF015N16+ AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTAC
JMSF009E10+ AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTAC
JMFS059H10+ AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTACAAATAAAAGAGAGAAGAA
JMSF038M01+ AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTACAAATAAAAGAGAGAAGAAGATTAGAG
JMFS026A07+ AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTACAAATAAAAGAGAGAAGAAGATTAGAG
JMSF011P15+ AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTACAAATAAAAGAGAGAAGAAGATTAGAG
____________________________________________________________
consensus AAGATGTGGAGGCGAAGAAGGAGAAAAGATTTACAAATAAAAGAGAGAAGAAGATTAGAG
. : . : . : . : . : . :
JMSF038M01+ GGGTCATATTATCATAACTTTTCTTGAATTGGGTAATTAGAAATGTAGGGAGCTCTGATC
JMFS026A07+ GGGTCATATTATCATAACTTTTCTTGAATTGGGTAATTAGAAATGTAGGGAGCTCTGATC
JMSF011P15+ GGGTCATATTATCATAACTTTTCTTGAATTGGGTAATTAGAAATGTAGGGAGCTCTGATC
____________________________________________________________
consensus GGGTCATATTATCATAACTTTTCTTGAATTGGGTAATTAGAAATGTAGGGAGCTCTGATC
. : . : . : . : . : . :
JMSF038M01+ CAGTATAGATGTGGTGGTGAA
JMFS026A07+ CAGTATAGATGTGGTGGTGAATGGTGATACAG
JMSF011P15+ CAGTATAGATGTGGTGGTGAATGGTGATACAGCCAGAGCCATACAGAATTATATTCTTCC
____________________________________________________________
consensus CAGTATAGATGTGGTGGTGAATGGTGATACAGCCAGAGCCATACAGAATTATATTCTTCC